The protein information resource

Nucleic Acids Research

Volumn 31, Issue 1, 2003, Pages 345-347

  Wu, Cathy H ^b   Yeh, Lai Su ^a   Huang, Hongzhan ^b   Arminski, Leslie ^a   Castro Alvear, Jorge ^a   Chen, Yongxing ^a   Hu, Zhangzhi ^a   Kourtesis, Panagiotis ^a   Ledley, Robert S ^a   Suzek, Baris E ^a   Vinayaka, C R ^a   Zhang, Jian ^a   Barker, Winona C ^a  

^a National Biomedical Research Foundation   (United States)

^b GEORGETOWN UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ANALYTICAL ERROR; AUTOMATION; BIBLIOGRAPHIC DATABASE; DATA ANALYSIS; EMBL NUCLEOTIDE SEQUENCE DATABASE; GENOMICS; GENPEPT DATABASE; INFORMATION RETRIEVAL; INTEGRATED PROTEIN CLASSIFICATION DATABASE; INTERNET; MEDICAL INFORMATION SYSTEM; MEDICAL LITERATURE; MEDICAL RESEARCH; NON REDUNDANT REFERENCE DATABASE; PDB DATABASE; PIR PSD DATABASE; PRIORITY JOURNAL; PROTEIN DATABASE; PROTEIN FAMILY; PROTEIN FUNCTION; PROTEIN INFORMATION RESOURCE; PROTEIN STRUCTURE; PROTEOMICS; REFSEQ DATABASE; RETROSPECTIVE STUDY; REVIEW; SENSITIVITY ANALYSIS; SEQUENCE ANALYSIS; SEQUENCE DATABASE; SWISS-PROT; TAXONOMY;

AMINO ACID SEQUENCE; ANIMALS; DATABASES, BIBLIOGRAPHIC; DATABASES, PROTEIN; INTERNET; PROTEINS;

EID: 0037246063     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg040     Document Type: Review

References (10)

1. Wu,C.H., Xiao,C., Hou,Z., Huang,H. and Barker,W.C. (2001) iProClass: an integrated and comprehensive protein classification database. Nucleic Acids Res., 29, 52-54.
2. Barker,W.C., Pfeiffer,F. and George,D.G. (1996) Superfamily classification in PIR-International Protein Sequence Database. Methods Enzymol., 266, 59-71.
3. Bairoch,A. and Apweiler,R. (2000) The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000. Nucleic Acids Res., 28, 45-48.
4. Pruitt,K.D. and Maglott,D.R. (2001) RefSeq and LocusLink: NCBI gene-centered resources. Nucleic Acids Res., 29, 137-140.
5. Westbrook,J., Feng,Z., Jain,S., Bhat,T.N., Thanki,N., Ravichandran,V., Gilliland,G.L., Bluhm,W., Weissig,H., GreerD.S., Bourne,P.E. and Berman,H.E. (2002) The Protein Data Bank: unifying the archive. Nucleic Acids Res., 30, 245-248.
6. Pearson,W.R. and Lipman,D.J. (1988) Improved tools for biological sequence comparison. Proc. Natl Acad. Sci. USA, 85, 2444-2448.
7. Altschul,S.F., Madden,T.L., Schaffer,A.A., Zhang,J., Zhang,Z., Miller,W. and Lipman,D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
8. Eddy,S.R., Mitchison,G. and Durbin,R. (1995) Maximum Discrimination hidden Markov models of sequence consensus. J. Comp. Biol., 2, 9-23.
9. Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
10. Felsenstein,J. (1989) PHYLIP-phylogeny inference package (Version 3.2). Cladistics, 5, 164-166.