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Volumn 8, Issue 6, 2013, Pages

Differential Response of the Cynomolgus Macaque Gut Microbiota to Shigella Infection

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM ANTIBODY; LIVE VACCINE; RNA 16S; SHIGELLA ANTIBODY; SHIGELLA VACCINE; UNCLASSIFIED DRUG; BACTERIAL RNA;

EID: 84878789598     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0064212     Document Type: Article
Times cited : (55)

References (48)
  • 1
    • 34250353445 scopus 로고    scopus 로고
    • Clinical trials of Shigella vaccines: two steps forward and one step back on a long, hard road
    • Levine MM, Kotloff KL, Barry EM, Pasetti MF, Sztein MB, (2007) Clinical trials of Shigella vaccines: two steps forward and one step back on a long, hard road. Nat Rev Micro 5: 540-553.
    • (2007) Nat Rev Micro , vol.5 , pp. 540-553
    • Levine, M.M.1    Kotloff, K.L.2    Barry, E.M.3    Pasetti, M.F.4    Sztein, M.B.5
  • 2
    • 0032879806 scopus 로고    scopus 로고
    • Global burden of Shigella infections: implications for vaccine development and implementation of control strategies
    • Kotloff KL, Winickoff JP, Ivanoff B, Clemens JD, Swerdlow DL, et al. (1999) Global burden of Shigella infections: implications for vaccine development and implementation of control strategies. Bull World Health Organ 77: 651-666.
    • (1999) Bull World Health Organ , vol.77 , pp. 651-666
    • Kotloff, K.L.1    Winickoff, J.P.2    Ivanoff, B.3    Clemens, J.D.4    Swerdlow, D.L.5
  • 3
    • 10744231239 scopus 로고    scopus 로고
    • Two Studies Evaluating the Safety and Immunogenicity of a Live, Attenuated Shigella flexneri 2a Vaccine (SC602) and Excretion of Vaccine Organisms in North American Volunteers
    • Katz DE, Coster TS, Wolf MK, Trespalacios FC, Cohen D, et al. (2004) Two Studies Evaluating the Safety and Immunogenicity of a Live, Attenuated Shigella flexneri 2a Vaccine (SC602) and Excretion of Vaccine Organisms in North American Volunteers. Infection and Immunity 72: 923-930.
    • (2004) Infection and Immunity , vol.72 , pp. 923-930
    • Katz, D.E.1    Coster, T.S.2    Wolf, M.K.3    Trespalacios, F.C.4    Cohen, D.5
  • 4
    • 0032968361 scopus 로고    scopus 로고
    • Vaccination against Shigellosis with Attenuated Shigella fl{ligature}exneri 2a Strain SC602
    • Coster TS, Hoge CW, VanDeVerg LL, Hartman AB, Oaks EV, et al. (1999) Vaccination against Shigellosis with Attenuated Shigella fl{ligature}exneri 2a Strain SC602. Infection and Immunity 67: 3437-3443.
    • (1999) Infection and Immunity , vol.67 , pp. 3437-3443
    • Coster, T.S.1    Hoge, C.W.2    VanDeVerg, L.L.3    Hartman, A.B.4    Oaks, E.V.5
  • 5
    • 78751578966 scopus 로고    scopus 로고
    • Safety, dose, immunogenicity, and transmissibility of an oral live attenuated Shigella flexneri 2a vaccine candidate (SC602) among healthy adults and school children in Matlab, Bangladesh
    • Rahman K, Arifeen S, Zaman K, Rahman M, Raqib R, et al. (2011) Safety, dose, immunogenicity, and transmissibility of an oral live attenuated Shigella flexneri 2a vaccine candidate (SC602) among healthy adults and school children in Matlab, Bangladesh. Vaccine 29: 1347-1354.
    • (2011) Vaccine , vol.29 , pp. 1347-1354
    • Rahman, K.1    Arifeen, S.2    Zaman, K.3    Rahman, M.4    Raqib, R.5
  • 6
    • 0026795176 scopus 로고
    • Safety and immunogenicity of single-dose live oral cholera vaccine CVD 103-HgR in 5-9-year-old Indonesian children
    • Suharyono SC, Witham N, Punjabi N, Heppner DG, Losonsky G, et al. (1992) Safety and immunogenicity of single-dose live oral cholera vaccine CVD 103-HgR in 5-9-year-old Indonesian children. Lancet 340: 689-694.
    • (1992) Lancet , vol.340 , pp. 689-694
    • Suharyono, S.C.1    Witham, N.2    Punjabi, N.3    Heppner, D.G.4    Losonsky, G.5
  • 7
    • 0037159623 scopus 로고    scopus 로고
    • Calibrated serological techniques demonstrate significant different serum response rates to an oral killed cholera vaccine between Swedish and Nicaraguan children
    • Hallander HO, Paniagua M, Espinoza F, Askelöf P, Corrales E, et al. (2002) Calibrated serological techniques demonstrate significant different serum response rates to an oral killed cholera vaccine between Swedish and Nicaraguan children. Vaccine 21: 138-145.
    • (2002) Vaccine , vol.21 , pp. 138-145
    • Hallander, H.O.1    Paniagua, M.2    Espinoza, F.3    Askelöf, P.4    Corrales, E.5
  • 8
    • 42949093134 scopus 로고    scopus 로고
    • Shigellosis: the current status of vaccine development
    • Kweon M-N, (2008) Shigellosis: the current status of vaccine development. Curr Opin Infect Dis 21: 313-318.
    • (2008) Curr Opin Infect Dis , vol.21 , pp. 313-318
    • Kweon, M.-N.1
  • 9
    • 0025997639 scopus 로고
    • Effect of prior infection with virulent Shigella flexneri 2a on the resistance of mnkeys to subsequent infection with Shigella sonnei
    • Formal SB, Oaks VE, Olsen RE, Wingfield-Eggleston M, Snoy PJ, et al. (1991) Effect of prior infection with virulent Shigella flexneri 2a on the resistance of mnkeys to subsequent infection with Shigella sonnei. Journal of Infectious Disease 164: 533-537.
    • (1991) Journal of Infectious Disease , vol.164 , pp. 533-537
    • Formal, S.B.1    Oaks, V.E.2    Olsen, R.E.3    Wingfield-Eggleston, M.4    Snoy, P.J.5
  • 10
    • 77749270726 scopus 로고    scopus 로고
    • A challenge model for Shigella dysenteriae 1 in cynomolgus monkeys (Macaca fascicularis)
    • Shipley ST, Panda A, Khan AQ, Kriel EH, Maciel M, et al. (2010) A challenge model for Shigella dysenteriae 1 in cynomolgus monkeys (Macaca fascicularis). Comp Med 60: 54-61.
    • (2010) Comp Med , vol.60 , pp. 54-61
    • Shipley, S.T.1    Panda, A.2    Khan, A.Q.3    Kriel, E.H.4    Maciel, M.5
  • 11
    • 79251519294 scopus 로고    scopus 로고
    • Should the Human Microbiome Be Considered When Developing Vaccines?
    • Ferreira RBR, Antunes LCM, Finlay BB, (2010) Should the Human Microbiome Be Considered When Developing Vaccines? PLoS Pathog 6: e1001190.
    • (2010) PLoS Pathog , vol.6
    • Ferreira, R.B.R.1    Antunes, L.C.M.2    Finlay, B.B.3
  • 12
    • 84858439578 scopus 로고    scopus 로고
    • The human microbiome: at the interface of health and disease
    • Cho I, Blaser MJ, (2012) The human microbiome: at the interface of health and disease. Nat Rev Genet 13: 260-270.
    • (2012) Nat Rev Genet , vol.13 , pp. 260-270
    • Cho, I.1    Blaser, M.J.2
  • 13
    • 67349250428 scopus 로고    scopus 로고
    • The gut microbiota shapes intestinal immune responses during health and disease
    • Round JL, Mazmanian SK, (2009) The gut microbiota shapes intestinal immune responses during health and disease. Nature Reviews Immunology 9: 313-323.
    • (2009) Nature Reviews Immunology , vol.9 , pp. 313-323
    • Round, J.L.1    Mazmanian, S.K.2
  • 14
    • 78649752538 scopus 로고    scopus 로고
    • Characterization of the Fecal Microbiome from Non- Human Wild Primates Reveals Species Specific Microbial Communities
    • Suleyman Y, Yeoman CJ, Sipos M, Torralba M, Wilson BA, et al. (2010) Characterization of the Fecal Microbiome from Non- Human Wild Primates Reveals Species Specific Microbial Communities. PloS One 5: e13963.
    • (2010) PloS One , vol.5
    • Suleyman, Y.1    Yeoman, C.J.2    Sipos, M.3    Torralba, M.4    Wilson, B.A.5
  • 15
    • 78649978358 scopus 로고    scopus 로고
    • Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities
    • Ochman H, Worobey M, Chih-Horng K, Ndjango J-BN, Peeters M, et al. (2010) Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities. PLoS Biology 8: e1000546.
    • (2010) PLoS Biology , vol.8
    • Ochman, H.1    Worobey, M.2    Chih-Horng, K.3    Ndjango, J.-B.N.4    Peeters, M.5
  • 17
    • 40349113425 scopus 로고    scopus 로고
    • The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis
    • McKenna P, Hoffmann C, Minkah N, Aye PP, Lackner A, et al. (2008) The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis. PLoS Pathog 4: e20.
    • (2008) PLoS Pathog , vol.4
    • McKenna, P.1    Hoffmann, C.2    Minkah, N.3    Aye, P.P.4    Lackner, A.5
  • 18
    • 84855733490 scopus 로고    scopus 로고
    • Live Attenuated Shigella dysenteriae Type 1 Vaccine Strains Overexpressing Shiga Toxin B Subunit
    • Wu T, Grassel C, Levine MM, Barry EM, (2011) Live Attenuated Shigella dysenteriae Type 1 Vaccine Strains Overexpressing Shiga Toxin B Subunit. Infection and Immunity 79: 4912-4922.
    • (2011) Infection and Immunity , vol.79 , pp. 4912-4922
    • Wu, T.1    Grassel, C.2    Levine, M.M.3    Barry, E.M.4
  • 19
    • 40149103278 scopus 로고    scopus 로고
    • Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
    • Hamady M, Walker JJ, Harris JK, Gold NJ, Knight R, (2008) Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nat Meth 5: 235-237.
    • (2008) Nat Meth , vol.5 , pp. 235-237
    • Hamady, M.1    Walker, J.J.2    Harris, J.K.3    Gold, N.J.4    Knight, R.5
  • 20
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
    • Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, et al. (2009) Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities. Applied and Environmental Microbiology 75: 7537-7541.
    • (2009) Applied and Environmental Microbiology , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3    Hall, J.R.4    Hartmann, M.5
  • 21
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, et al. (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Research 35: 7188-7196.
    • (2007) Nucleic Acids Research , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5
  • 24
    • 84870506713 scopus 로고    scopus 로고
    • Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates
    • Xia LC, Steele JA, Cram JA, Cardon ZG, Simmons SL, et al. (2011) Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates. BMC Syst Biol 5Suppl 2: S15.
    • (2011) BMC Syst Biol , vol.5
    • Xia, L.C.1    Steele, J.A.2    Cram, J.A.3    Cardon, Z.G.4    Simmons, S.L.5
  • 25
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: new features for data integration and network visualization
    • Smoot M, Ono K, Ruscheinski J, Wang P, Ideker T, (2011) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 27: 431-432.
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.1    Ono, K.2    Ruscheinski, J.3    Wang, P.4    Ideker, T.5
  • 26
    • 35148848701 scopus 로고    scopus 로고
    • Factors shaping genetic variation in the MHC of natural non-human primate populations
    • Bonhomme M, Blancher A, Jalil MF, Crouau-Roy B, (2007) Factors shaping genetic variation in the MHC of natural non-human primate populations. Tissue Antigens 70: 398-411.
    • (2007) Tissue Antigens , vol.70 , pp. 398-411
    • Bonhomme, M.1    Blancher, A.2    Jalil, M.F.3    Crouau-Roy, B.4
  • 27
    • 32944473434 scopus 로고    scopus 로고
    • Multiplexed microsatellites for rapid identification and characterization of individuals and populations of Cercopithecidae
    • Bonhomme M, Blancher A, Crouau-Roy B, (2005) Multiplexed microsatellites for rapid identification and characterization of individuals and populations of Cercopithecidae. American Journal of Primatology 67: 385-391.
    • (2005) American Journal of Primatology , vol.67 , pp. 385-391
    • Bonhomme, M.1    Blancher, A.2    Crouau-Roy, B.3
  • 28
    • 79954590417 scopus 로고    scopus 로고
    • POLYSAT an R package for polyploid microsatellite analysis
    • Clark L, Jasieniuk M, (2011) POLYSAT an R package for polyploid microsatellite analysis. Molecular Ecology Resources 11: 562-566.
    • (2011) Molecular Ecology Resources , vol.11 , pp. 562-566
    • Clark, L.1    Jasieniuk, M.2
  • 29
    • 0000122573 scopus 로고
    • PHYLIP-Phylogeny Inference Package (version 3.2)
    • Felsenstein J, (1989) PHYLIP-Phylogeny Inference Package (version 3.2). Cladistics 5: 164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 30
    • 80053618114 scopus 로고    scopus 로고
    • Linking long-term dietary patterns with gut microbial enterotypes
    • Wu GD, Chen J, Hoffmann C, Bittinger K, Chen Y-Y, et al. (2011) Linking long-term dietary patterns with gut microbial enterotypes. Science 334: 105-108.
    • (2011) Science , vol.334 , pp. 105-108
    • Wu, G.D.1    Chen, J.2    Hoffmann, C.3    Bittinger, K.4    Chen, Y.-Y.5
  • 31
    • 82255195996 scopus 로고    scopus 로고
    • Sparse estimation of a covariance matrix
    • Bien J, Tibshirani R, (2011) Sparse estimation of a covariance matrix. Biometrika 98: 807-820.
    • (2011) Biometrika , vol.98 , pp. 807-820
    • Bien, J.1    Tibshirani, R.2
  • 32
    • 26844432278 scopus 로고    scopus 로고
    • Unusually high frequency MHC class I alleles in Mauritian origin cynomolgus macaques
    • Krebs KC, Jin Z, Rudersdorf R, Hughes AL, O'Connor DH, (2005) Unusually high frequency MHC class I alleles in Mauritian origin cynomolgus macaques. J Immunol 175: 5230-5239.
    • (2005) J Immunol , vol.175 , pp. 5230-5239
    • Krebs, K.C.1    Jin, Z.2    Rudersdorf, R.3    Hughes, A.L.4    O'Connor, D.H.5
  • 33
    • 58549100291 scopus 로고    scopus 로고
    • MHC haplotype frequencies in a UK breeding colony of Mauritian cynomolgus macaques mirror those found in a distinct population from the same geographic origin
    • Mee ET, Badhan A, Karl JA, Wiseman RW, Cutler K, et al. (2009) MHC haplotype frequencies in a UK breeding colony of Mauritian cynomolgus macaques mirror those found in a distinct population from the same geographic origin. Journal of Medical Primatology 38: 1-14.
    • (2009) Journal of Medical Primatology , vol.38 , pp. 1-14
    • Mee, E.T.1    Badhan, A.2    Karl, J.A.3    Wiseman, R.W.4    Cutler, K.5
  • 34
    • 54449097114 scopus 로고    scopus 로고
    • Hybridization and stratification of nuclear genetic variation in Macaca mulatta and Macaca fascicularis
    • Kanthaswamy S, Satkoski J, Georges D, Kou A, Erickson B, et al. (2008) Hybridization and stratification of nuclear genetic variation in Macaca mulatta and Macaca fascicularis. International Journal of Primatology 29: 1295-1311.
    • (2008) International Journal of Primatology , vol.29 , pp. 1295-1311
    • Kanthaswamy, S.1    Satkoski, J.2    Georges, D.3    Kou, A.4    Erickson, B.5
  • 35
    • 44749092729 scopus 로고    scopus 로고
    • Comparative study of Tat vaccine regimens in Mauritian cynomolgus and Indian rhesus macaques: Influence of Mauritian MHC haplotypes on susceptibility/resistance to SHIV89.6P infection
    • Florese RH, Wiseman RW, Venzon D, Karl JA, Demberg T, et al. (2008) Comparative study of Tat vaccine regimens in Mauritian cynomolgus and Indian rhesus macaques: Influence of Mauritian MHC haplotypes on susceptibility/resistance to SHIV89.6P infection. Vaccine 26: 3312-3321.
    • (2008) Vaccine , vol.26 , pp. 3312-3321
    • Florese, R.H.1    Wiseman, R.W.2    Venzon, D.3    Karl, J.A.4    Demberg, T.5
  • 36
    • 0032811292 scopus 로고    scopus 로고
    • Plasmodium coatneyi: differential clinical and immune responses of two populations of Macaca fascicularis from different origins
    • Migot-Nabias F, Ollomo B, Dubreuil G, Morelli A, Domarle O, et al. (1999) Plasmodium coatneyi: differential clinical and immune responses of two populations of Macaca fascicularis from different origins. Experimental Parasitology 91: 30-39.
    • (1999) Experimental Parasitology , vol.91 , pp. 30-39
    • Migot-Nabias, F.1    Ollomo, B.2    Dubreuil, G.3    Morelli, A.4    Domarle, O.5
  • 37
    • 33845775218 scopus 로고    scopus 로고
    • Simian Immunodeficiency Virus SIVmac239 Infection of Major Histocompatibility Complex-Identical Cynomolgus Macaques from Mauritius
    • Wiseman RW, Wojcechowskyj JA, Greene JM, Blasky AJ, Gopon T, et al. (2007) Simian Immunodeficiency Virus SIVmac239 Infection of Major Histocompatibility Complex-Identical Cynomolgus Macaques from Mauritius. Journal of Virology 81: 349-361.
    • (2007) Journal of Virology , vol.81 , pp. 349-361
    • Wiseman, R.W.1    Wojcechowskyj, J.A.2    Greene, J.M.3    Blasky, A.J.4    Gopon, T.5
  • 38
    • 84857365075 scopus 로고    scopus 로고
    • Characterisation of MHC haplotypes in a breeding colony of Indonesian cynomolgus macaques reveals a high level of diversity
    • Mitchell JL, Mee ET, Almond NM, Cutler K, Rose NJ, (2012) Characterisation of MHC haplotypes in a breeding colony of Indonesian cynomolgus macaques reveals a high level of diversity. Immunogenetics 64: 123-129.
    • (2012) Immunogenetics , vol.64 , pp. 123-129
    • Mitchell, J.L.1    Mee, E.T.2    Almond, N.M.3    Cutler, K.4    Rose, N.J.5
  • 40
    • 0034636310 scopus 로고    scopus 로고
    • The diversity-stability debate
    • McCann KS, (2000) The diversity-stability debate. Nature 405: 228-233.
    • (2000) Nature , vol.405 , pp. 228-233
    • McCann, K.S.1
  • 42
    • 84856866840 scopus 로고    scopus 로고
    • Stress and the gut: pathophysiology, clinical consequences, diagnostic approach and treatment options
    • Konturek PC, Brzozowski T, Konturek SJ, (2011) Stress and the gut: pathophysiology, clinical consequences, diagnostic approach and treatment options. J Physiol Pharmacol 62: 591-599.
    • (2011) J Physiol Pharmacol , vol.62 , pp. 591-599
    • Konturek, P.C.1    Brzozowski, T.2    Konturek, S.J.3
  • 43
    • 77950202391 scopus 로고    scopus 로고
    • Stressor exposure disrupts commensal microbial populations in the intestines and leads to increased colonization by Citrobacter rodentium
    • Bailey MT, Dowd SE, Parry NMA, Galley JD, Schauer DB, et al. (2010) Stressor exposure disrupts commensal microbial populations in the intestines and leads to increased colonization by Citrobacter rodentium. Infection and Immunity 78: 1509-1519.
    • (2010) Infection and Immunity , vol.78 , pp. 1509-1519
    • Bailey, M.T.1    Dowd, S.E.2    Parry, N.M.A.3    Galley, J.D.4    Schauer, D.B.5
  • 45
    • 44849102151 scopus 로고    scopus 로고
    • Mode of delivery-effects on the gut microbiota and humoral immunity
    • Huurre A, Kalliomaki M, Rautava S, Rinne M, Salminen S, et al. (2008) Mode of delivery-effects on the gut microbiota and humoral immunity. Neonatology 93: 236-240.
    • (2008) Neonatology , vol.93 , pp. 236-240
    • Huurre, A.1    Kalliomaki, M.2    Rautava, S.3    Rinne, M.4    Salminen, S.5
  • 46
    • 84862286169 scopus 로고    scopus 로고
    • A framework for human microbiome research
    • Consortium HMP, (2012) A framework for human microbiome research. Nature 486: 215-221.
    • (2012) Nature , vol.486 , pp. 215-221
    • Consortium, H.M.P.1
  • 47
    • 0035082966 scopus 로고    scopus 로고
    • Influence of major histocompatibility complex on bacterial composition of fecal flora
    • Toivanen P, Vaahtovuo J, Eerola E, (2001) Influence of major histocompatibility complex on bacterial composition of fecal flora. Infection and Immunity 69: 2372-2377.
    • (2001) Infection and Immunity , vol.69 , pp. 2372-2377
    • Toivanen, P.1    Vaahtovuo, J.2    Eerola, E.3
  • 48
    • 84865741828 scopus 로고    scopus 로고
    • The Human Microbiome Project: A Community Resource for the Healthy Human Microbiome
    • Gevers D, Knight R, Petrosino JF, Huang K, McGuire AL, et al. (2012) The Human Microbiome Project: A Community Resource for the Healthy Human Microbiome. PLoS Biology 10: e1001377.
    • (2012) PLoS Biology , vol.10
    • Gevers, D.1    Knight, R.2    Petrosino, J.F.3    Huang, K.4    McGuire, A.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.