Multiplexed microsatellites for rapid identification and characterization of individuals and populations of cercopithecidae

American Journal of Primatology

Volumn 67, Issue 3, 2005, Pages 385-391

  Bonhomme, M ^a   Blancher, A ^a   Crouau Roy, B ^a,b  

^a UNIVERSITÉ DE TOULOUSE   (France)

^b École Nationale de Formation Agronomique   (France)

Author keywords

Cercopithecidae; Cross amplification; Macaca; Microsatellites; Multiplexing; Probability of identity

Indexed keywords

MICROSATELLITE DNA;

GENETIC ANALYSIS;

ANIMAL; ANIMAL IDENTIFICATION; ARTICLE; CERCOPITHECIDAE; GENETIC MARKER; GENETIC VARIABILITY; GENETICS; GENOTYPE; METHODOLOGY; SPECIES DIFFERENCE; TIME;

ANIMAL IDENTIFICATION SYSTEMS; ANIMALS; CERCOPITHECIDAE; GENETIC MARKERS; GENOTYPE; MICROSATELLITE REPEATS; SPECIES SPECIFICITY; TIME FACTORS; VARIATION (GENETICS);

CERCOPITHECIDAE; MACACA; MACACA FASCICULARIS; MACACA MULATTA;

EID: 32944473434     PISSN: 02752565     EISSN: None     Source Type: Journal    
DOI: 10.1002/ajp.20193     Document Type: Article

References (20)

1. Belkhir K, Borsa P, Chikhi L, Goudet J, Bonhomme F. 1996/1997. GENETIX 3.07, Windows® software for population genetics. University of Montpellier II, Montpellier, France.
2. Blanquer-Maumont A, Crouau-Roy B. 1995. Polymorphism, monomorphism, and sequences in conserved microsatellites in primate species. J Mol Evol 41:492-497.
3. Bradley BJ, Boesch C, Vigilant L. 2000. Identification and redesign of human microsatellite markers for genotyping wild chimpanzees (Pan troglodytes) and gorilla (Gorilla gorilla gorilla) DNA from faeces. Conserv Genet 1:289-292.
4. Clifford SL, Jeffery K, Bruford MW, Wickings EJ. 1999. Identification of polymorphic microsatellite loci in the gorilla (Gorilla gorilla gorilla) using human primers: application to noninvasively collected hair samples. Mol Ecol 8:1556-1558.
5. Clisson I, Lathuillière M, Crouau-Roy B. 2000. Conservation and evolution of microsatellite loci in primate taxa. Am J Primatol 50:205-214.
6. Dib C, Faure S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette J, Weissenbach J. 1996. A comprehensive genetic map of the human genome based on 5264 microsatellites. Nature 14:152-154.
7. Flynn JL, Capuano SV, Croix D, Pawar S, Myers A, Zinovik A, Klein E. 2003. Nonhuman primates: a model for tuberculosis research. Tuberculosis 83:116-118.
8. Fooden J. 1976. Provisional classification and key to living species of macaques (Primates: Macaca). Folia Primatol 25:225-236.
9. Grimaldi MC, Crouau-Roy B. 1996. Microsatellite allelic homoplasy due to variable flanking sequences. J Mol Evol 44:336-340.
10. Hadfield RM, Pullen JG, Davies KF, Wolfensohn SE, Kemnitz JW, Weeks DE, Bennett ST, Kennedy SH. 2001. Toward developing a genome-wide microsatellite marker set for linkage analysis in the rhesus macaque (Macaca mulatta): identification of 76 polymorphic markers. Am J Primatol 54:223-231
11. Kennedy RC, Shearer MH, Hildebrand W. 1997. Nonhuman primate models to evaluate vaccine safety and immunogenicity. Vaccine 15:903-908.
12. Morin PA, Kanthaswamy S, Smith DG. 1997. Simple sequence repeat (SSR) polymorphisms for colony management and population genetics in rhesus macaques (Macaca mulatta). Am J Primatol 42:199-213.
13. Nievergelt CM, Mutschler T, Feistner AT, Woodruff DS. 2002. Social system of the Alaotran gentle lemur (Hapalemur griseus alaotrensis): genetic characterization of group composition and mating system. Am J Primatol 57:157-176.
14. Nürnberg P, Sauermann U, Kayser M, Lanfer C, Manz E, Widdig A, Berard J, Bercovitch FB, Kessler M, Schmidtke J, Krawczak M. 1998. Paternity assessment in rhesus macaques (Macaca mulatta): multilocus DNA fingerprinting and PCR marker typing. Am J Primatol 44:1-18.
15. Paetkau D, Waits LP, Clarkson PL, Craighead L, Vyse E, Ward R, Strobeck C. 1998. Variation in genetic diversity across the range of North American brown bears. Conserv Biol 12:418-429.
16. Schaffner SF. 2004. The X chromosome in population genetics. Nat Rev Genet 5:43-51.
17. Slatkin M. 1995. Hitchhiking and associative overdominance at a microsatellite locus. Mol Biol Evol 12:473-480.
18. Smith DG, Sreetharan K, Viray J, Cody L. 2000. Additional highly polymorphic microsatellite (STR) loci for estimating kinship in rhesus macaques (Macaca mulatta). Am J Primatol 50:1-7.
19. Waits LP, Luikart G, Taberlet P. 2001. Estimating the probability of identity among genotypes in natural populations: cautions and guidelines. Mol Ecol 10:249-256.
20. Woods JG, Paetkau D, Lewis D, McLellan BN, Proctor M, Strobeck C. 1999. Genetic tagging of free-ranging black and brown bears. Wildl Soc Bull 27:616-627.