-
1
-
-
33746669364
-
Molecular interactions between bacterial symbionts and their hosts
-
Dale C, Moran NA (2006) Molecular interactions between bacterial symbionts and their hosts. Cell 126: 453-65.
-
(2006)
Cell
, vol.126
, pp. 453-465
-
-
Dale, C.1
Moran, N.A.2
-
2
-
-
49649116592
-
How bacteria contributed to the evolution of multicellular animals?
-
In: Margaret JMcFall Ngai, ed., New York: Cambridge University Press
-
Hickman C (2005) How bacteria contributed to the evolution of multicellular animals? In: Margaret JMcFall Ngai, ed. The Influence of Cooperative Bacteria on Animal Host Biology. New York: Cambridge University Press. pp 3-35.
-
(2005)
The Influence of Cooperative Bacteria On Animal Host Biology
, pp. 3-35
-
-
Hickman, C.1
-
3
-
-
0035843993
-
Commensal host-bacterial relationships in the gut
-
Hooper LV, Gordon JI (2001) Commensal host-bacterial relationships in the gut. Science 292: 1115-8.
-
(2001)
Science
, vol.292
, pp. 1115-1118
-
-
Hooper, L.V.1
Gordon, J.I.2
-
4
-
-
67349250428
-
The gut microbiota shapes intestinal immune responses during health and disease
-
Round JL, Mazmanian SK (2009) The gut microbiota shapes intestinal immune responses during health and disease. Nat Rev Immunol 9: 313-23.
-
(2009)
Nat Rev Immunol
, vol.9
, pp. 313-323
-
-
Round, J.L.1
Mazmanian, S.K.2
-
6
-
-
0033566164
-
Human evolution. We are what we ate
-
Wood B, Brooks A (1999) Human evolution. We are what we ate. Nature 400: 219-220.
-
(1999)
Nature
, vol.400
, pp. 219-220
-
-
Wood, B.1
Brooks, A.2
-
7
-
-
33751069717
-
Diet in early Homo: A review of the evidence and a new model of adaptive versatility
-
Ungar PS, Grine FE, Teaford MF (2006) Diet in early Homo: A review of the evidence and a new model of adaptive versatility. Annual Review of Anthropology 35: 209-228.
-
(2006)
Annual Review of Anthropology
, vol.35
, pp. 209-228
-
-
Ungar, P.S.1
Grine, F.E.2
Teaford, M.F.3
-
8
-
-
0003140748
-
The Expensive-Tissue Hypotheis
-
Aiello LC, Wheeler P (1995) The Expensive-Tissue Hypotheis. Curr Anthropol 36: 199-221.
-
(1995)
Curr Anthropol
, vol.36
, pp. 199-221
-
-
Aiello, L.C.1
Wheeler, P.2
-
9
-
-
0037308502
-
Dietary constraints on encephalization in primates
-
Fish JL, Lockwood CA (2003) Dietary constraints on encephalization in primates. Am J Phys Anthropol 120: 171-81.
-
(2003)
Am J Phys Anthropol
, vol.120
, pp. 171-181
-
-
Fish, J.L.1
Lockwood, C.A.2
-
10
-
-
58449125407
-
Genomics and evolution of heritable bacterial symbionts
-
Moran NA, McCutcheon JP, Nakabachi A (2008) Genomics and evolution of heritable bacterial symbionts. Annu Rev Genet 42: 165-90.
-
(2008)
Annu Rev Genet
, vol.42
, pp. 165-190
-
-
Moran, N.A.1
McCutcheon, J.P.2
Nakabachi, A.3
-
12
-
-
0036467992
-
Unseen forces: The influence of bacteria on animal development
-
McFall-Ngai MJ (2002) Unseen forces: the influence of bacteria on animal development. Dev Biol 242: 1-14.
-
(2002)
Dev Biol
, vol.242
, pp. 1-14
-
-
McFall-Ngai, M.J.1
-
13
-
-
0032438597
-
Regulation of symbiotic root nodule development
-
Schultze M, Kondorosi A (1998) Regulation of symbiotic root nodule development. Annu Rev Genet 32: 33-57.
-
(1998)
Annu Rev Genet
, vol.32
, pp. 33-57
-
-
Schultze, M.1
Kondorosi, A.2
-
14
-
-
22144490199
-
An immunomod-ulatory molecule of symbiotic bacteria directs maturation of the host immune system
-
Mazmanian SK, Liu CH, Tzianabos AO, Kasper DL (2005) An immunomod-ulatory molecule of symbiotic bacteria directs maturation of the host immune system. Cell 122: 107-18.
-
(2005)
Cell
, vol.122
, pp. 107-118
-
-
Mazmanian, S.K.1
Liu, C.H.2
Tzianabos, A.O.3
Kasper, D.L.4
-
15
-
-
17844404232
-
Gut microorganisms, mammalian metabolism and personalized health care
-
Nicholson JK, Holmes E, Wilson ID (2005) Gut microorganisms, mammalian metabolism and personalized health care. Nat Rev Microbiol 3: 431-438.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 431-438
-
-
Nicholson, J.K.1
Holmes, E.2
Wilson, I.D.3
-
16
-
-
41149099000
-
Symbiotic gut microbes modulate human metabolic phenotypes
-
Li M, Wang B, Zhang M, Rantalainen M, Wang S, et al. (2008) Symbiotic gut microbes modulate human metabolic phenotypes. Proc Natl Acad Sci USA 105: 2117-22.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 2117-2122
-
-
Li, M.1
Wang, B.2
Zhang, M.3
Rantalainen, M.4
Wang, S.5
-
17
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, et al. (2006) An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444: 1027-31.
-
(2006)
Nature
, vol.444
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Mahowald, M.A.3
Magrini, V.4
Mardis, E.R.5
-
18
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, et al. (2009) A core gut microbiome in obese and lean twins. Nature 457: 480-4.
-
(2009)
Nature
, vol.457
, pp. 480-484
-
-
Turnbaugh, P.J.1
Hamady, M.2
Yatsunenko, T.3
Cantarel, B.L.4
Duncan, A.5
-
20
-
-
77149149718
-
Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution
-
Oh PL, Benson AK, Peterson DA, Patil PB, Moriyama EN, et al. (2009) Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution. ISME J 4: 377-87.
-
(2009)
ISME J
, vol.4
, pp. 377-387
-
-
Oh, P.L.1
Benson, A.K.2
Peterson, D.A.3
Patil, P.B.4
Moriyama, E.N.5
-
21
-
-
46249085739
-
Evolution of mammals and their gut microbes
-
Ley RE, Hamady M, Lozupone C, Turnbaugh PJ, Ramey RR, et al. (2008a) Evolution of mammals and their gut microbes. Science 320: 1647-51.
-
(2008)
Science
, vol.320
, pp. 1647-1651
-
-
Ley, R.E.1
Hamady, M.2
Lozupone, C.3
Turnbaugh, P.J.4
Ramey, R.R.5
-
22
-
-
52049092682
-
Worlds within worlds: Evolution of the vertebrate gut microbiota
-
Ley RE, Lozupone CA, Hamady M, Knight R, Gordon JI (2008b) Worlds within worlds: evolution of the vertebrate gut microbiota. Nat Rev Microbiol 6: 776-88.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 776-788
-
-
Ley, R.E.1
Lozupone, C.A.2
Hamady, M.3
Knight, R.4
Gordon, J.I.5
-
23
-
-
0242384034
-
Review and re-analysis of domain-specific 16S primers
-
Baker GC, Smith JJ, Cowan DA (2003) Review and re-analysis of domain-specific 16S primers. J Microbiol Methods 55: 541-55.
-
(2003)
J Microbiol Methods
, vol.55
, pp. 541-555
-
-
Baker, G.C.1
Smith, J.J.2
Cowan, D.A.3
-
24
-
-
68549130740
-
Comparison of species richness estimates obtained using nearly complete fragments and simulated pyrosequencing-generated fragments in 16S rRNA gene-based environmental surveys
-
Youssef N, Sheik CS, Krumholz LR, Najar FZ, Roe BA, et al. (2009) Comparison of species richness estimates obtained using nearly complete fragments and simulated pyrosequencing-generated fragments in 16S rRNA gene-based environmental surveys. Appl Environ Microbiol 75: 5227-36.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5227-5236
-
-
Youssef, N.1
Sheik, C.S.2
Krumholz, L.R.3
Najar, F.Z.4
Roe, B.A.5
-
26
-
-
0027804103
-
Non-parametric multivariate analyses of changes in community structure
-
Clarke KR (1993) Non-parametric multivariate analyses of changes in community structure. Australian Journal of Ecology 18: 117-143.
-
(1993)
Australian Journal of Ecology
, vol.18
, pp. 117-143
-
-
Clarke, K.R.1
-
27
-
-
67649090385
-
-
Engelbrektson A, Korzenik JR, Pittler A, Sanders ME, Klaenhammer TR (2009) J Med Microbiol 58: 663-70.
-
(2009)
J Med Microbiol
, vol.58
, pp. 663-670
-
-
Engelbrektson, A.1
Korzenik, J.R.2
Pittler, A.3
Sanders, M.E.4
Klaenhammer, T.R.5
-
28
-
-
34548293679
-
Näi{dotless}ve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
-
Wang Q, Garrity JM, Tiedje JM, Cole JR (2007) Näi{dotless}ve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy. Appl Environ Microbiol 73: 5261-7.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, J.M.2
Tiedje, J.M.3
Cole, J.R.4
-
29
-
-
0038383120
-
Determinants of colobine monkey abundance: The importance of food energy, protein and fiber content
-
Wasserman MD, Chapman CA (2003) Determinants of colobine monkey abundance: the importance of food energy, protein and fiber content. J Anim Ecol 72: 650-659.
-
(2003)
J Anim Ecol
, vol.72
, pp. 650-659
-
-
Wasserman, M.D.1
Chapman, C.A.2
-
30
-
-
0012124827
-
Resource switching in guenons: A community analysis of dietary flexibility
-
In: Glenn, M, Cords, M, eds., New York: Kluwer Academic
-
Lambert J (2002) Resource switching in guenons: a community analysis of dietary flexibility. In: Glenn, M, Cords, M, eds. The Guenons: Diversity and Adaptation in African Monkeys. New York: Kluwer Academic. pp 303-317.
-
(2002)
The Guenons: Diversity and Adaptation In African Monkeys
, pp. 303-317
-
-
Lambert, J.1
-
31
-
-
20544444045
-
Diversity of the human intestinal microbial flora
-
Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, et al. (2005) Diversity of the human intestinal microbial flora. Science 308: 1635-8.
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
-
32
-
-
77953340555
-
Fecal bacterial diversity of human-habituated wild chimpanzees (Pan troglodytes schweinfurthii) at Mahale Mountains National Park, Western Tanzania
-
Szekely BA, Singh J, Marsh TL, Hagedorn C, Werre SR, et al. (2010) Fecal bacterial diversity of human-habituated wild chimpanzees (Pan troglodytes schweinfurthii) at Mahale Mountains National Park, Western Tanzania.;Am J Primatol 72: 566-574.
-
(2010)
Am J Primatol
, vol.72
, pp. 566-574
-
-
Szekely, B.A.1
Singh, J.2
Marsh, T.L.3
Hagedorn, C.4
Werre, S.R.5
-
33
-
-
77954450173
-
Phylogenetic analysis of the fecal flora of the wild pygmy loris
-
Bo X, Zun-xi H, Xiao-yan W, Run-chi G, Xiang-hua T, et al. (2010) Phylogenetic analysis of the fecal flora of the wild pygmy loris. Am J Primatol 72: 699-706.
-
(2010)
Am J Primatol
, vol.72
, pp. 699-706
-
-
Bo, X.1
Zun-Xi, H.2
Xiao-Yan, W.3
Run-Chi, G.4
Xiang-Hua, T.5
-
34
-
-
33646537767
-
Fecal bacterial diversity in a wild gorilla
-
Frey JC, Rothman JM, Pell AN, Nizeyi JB, Cranfield MR, et al. (2006) Fecal bacterial diversity in a wild gorilla. Appl Environ Microbiol 72: 3788-92.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3788-3792
-
-
Frey, J.C.1
Rothman, J.M.2
Pell, A.N.3
Nizeyi, J.B.4
Cranfield, M.R.5
-
35
-
-
34047185356
-
Molecular analyses of the intestinal microbiota of chimpanzees in the wild and in captivity
-
Uenishi G, Fujita S, Ohashi G, Kato A, Yamauchi S, et al. (2007) Molecular analyses of the intestinal microbiota of chimpanzees in the wild and in captivity. Am J Primatol 69: 367-376.
-
(2007)
Am J Primatol
, vol.69
, pp. 367-376
-
-
Uenishi, G.1
Fujita, S.2
Ohashi, G.3
Kato, A.4
Yamauchi, S.5
-
36
-
-
67650805670
-
Effects of high- and low-fiber diets on fecal fermentation and fecal microbial populations of captive chimpanzees
-
Kisidayová S, Váradyová Z, Pristas P, Piknová M, Nigutová K, et al. (2009) Effects of high- and low-fiber diets on fecal fermentation and fecal microbial populations of captive chimpanzees. Am J Primatol 71: 548-57.
-
(2009)
Am J Primatol
, vol.71
, pp. 548-557
-
-
Kisidayová, S.1
Váradyová, Z.2
Pristas, P.3
Piknová, M.4
Nigutová, K.5
-
37
-
-
77952158672
-
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
-
Turnbaugh PJ, Quince C, Faith JJ, McHardy AC, Yatsunenko T (2010) Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proc Natl Acad Sci U S A 107: 7503-8.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 7503-7508
-
-
Turnbaugh, P.J.1
Quince, C.2
Faith, J.J.3
McHardy, A.C.4
Yatsunenko, T.5
-
38
-
-
56849106496
-
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing
-
Dethlefsen L, Huse S, Sogin ML, Relman DA (2008) The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol 6: e280.
-
(2008)
PLoS Biol
, vol.6
-
-
Dethlefsen, L.1
Huse, S.2
Sogin, M.L.3
Relman, D.A.4
-
39
-
-
73349110099
-
Wrinkles in the rare biosphere: Pyrosequencing errors can lead to artificial inflation of diversity estimates
-
Kunin V, Engelbrektson A, Ochman H, Hugenholtz P (2010) Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates. Environ Microbiol 12: 118-23.
-
(2010)
Environ Microbiol
, vol.12
, pp. 118-123
-
-
Kunin, V.1
Engelbrektson, A.2
Ochman, H.3
Hugenholtz, P.4
-
40
-
-
33749997498
-
Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection
-
Rawls JF, Mahowald MA, Ley RE, Gordon JI (2006) Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell 127: 423-33.
-
(2006)
Cell
, vol.127
, pp. 423-433
-
-
Rawls, J.F.1
Mahowald, M.A.2
Ley, R.E.3
Gordon, J.I.4
-
41
-
-
78649739702
-
-
In: Primates in Perspective New York: Oxford University Press, 2nd Edition
-
Jaffe KE, Isbell LA (2007) African Colobine Monkeys and The Guenons. In: Primates in Perspective New York: Oxford University Press, 2nd Edition. pp 203-277.
-
(2007)
African Colobine Monkeys and The Guenons
, pp. 203-277
-
-
Jaffe, K.E.1
Isbell, L.A.2
-
42
-
-
0032852168
-
Diversity of extracellular proteolytic activities among Prevotella species from the rumen
-
Griswold KE, White BA, Mackie RI (1999) Diversity of extracellular proteolytic activities among Prevotella species from the rumen. Curr Microbiol 39: 187-94.
-
(1999)
Curr Microbiol
, vol.39
, pp. 187-194
-
-
Griswold, K.E.1
White, B.A.2
Mackie, R.I.3
-
43
-
-
41349093562
-
Plant cell wall breakdown by anaerobic microorganisms from the Mammalian digestive tract
-
Flint HJ, Bayer EA (2008) Plant cell wall breakdown by anaerobic microorganisms from the Mammalian digestive tract. Ann NY Acad Sci 1125: 280-8.
-
(2008)
Ann NY Acad Sci
, vol.1125
, pp. 280-288
-
-
Flint, H.J.1
Bayer, E.A.2
-
44
-
-
0028331531
-
Role of structural and extracellular virulence factors in gram-negative anaerobic bacteria
-
Botta GA, Arzese A, Minisini R, Trani G (1994) Role of structural and extracellular virulence factors in gram-negative anaerobic bacteria. Clin Infect Dis Suppl 4: S260-4.
-
(1994)
Clin Infect Dis Suppl
, vol.4
-
-
Botta, G.A.1
Arzese, A.2
Minisini, R.3
Trani, G.4
-
45
-
-
2942733453
-
Subdoligranulum variabile gen. nov., sp. nov. from human feces
-
Holmstrøm K, Collins MD, Møller T, Falsen E, Lawson PA (2004) Subdoligranulum variabile gen. nov., sp. nov. from human feces. Anaerobe 10: 197-203.
-
(2004)
Anaerobe
, vol.10
, pp. 197-203
-
-
Holmstrøm, K.1
Collins, M.D.2
Møller, T.3
Falsen, E.4
Lawson, P.A.5
-
46
-
-
50849133260
-
Forest fragmentation as cause of bacterial transmission among nonhuman primates, humans, and livestock, Uganda
-
Goldberg TL, Gillespie TR, Rwego IB, Estoff EL, Chapman CA (2008) Forest fragmentation as cause of bacterial transmission among nonhuman primates, humans, and livestock, Uganda. Emerg Infect Dis 14: 1375-82.
-
(2008)
Emerg Infect Dis
, vol.14
, pp. 1375-1382
-
-
Goldberg, T.L.1
Gillespie, T.R.2
Rwego, I.B.3
Estoff, E.L.4
Chapman, C.A.5
-
47
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, et al. (2009) Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-41.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
-
48
-
-
77949495216
-
A high-throughput DNA sequence aligner for microbial ecology studies
-
Schloss PD (2009) A high-throughput DNA sequence aligner for microbial ecology studies. PLoS ONE 4: e8230.
-
(2009)
PLoS ONE
, vol.4
-
-
Schloss, P.D.1
-
49
-
-
33747827586
-
NAST: A multiple sequence alignment server for comparative analysis of 16S rRNA genes
-
DeSantis TZ, Hugenholtz P, Keller K, Brodie EL, Larsen, N, et al. (2006) NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes. Nucleic Acids Res 34: W394.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Desantis, T.Z.1
Hugenholtz, P.2
Keller, K.3
Brodie, E.L.4
Larsen, N.5
|