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Volumn 23, Issue 6, 2013, Pages 941-953

Integrative analysis of C. elegans modENCODE ChIP-seq data sets to infer gene regulatory interactions

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR UNC 62; UNCLASSIFIED DRUG;

EID: 84878678567     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.152876.112     Document Type: Article
Times cited : (27)

References (70)
  • 2
    • 0042626242 scopus 로고    scopus 로고
    • SKN-1 links C. elegans mesendodermal specification to a conserved oxidative stress response
    • DOI 10.1101/gad.1107803
    • An JH, Blackwell TK. 2003. SKN-1 links C. elegans mesendodermal specification to a conserved oxidative stress response. Genes Dev 17: 1882-1893. (Pubitemid 36944565)
    • (2003) Genes and Development , vol.17 , Issue.15 , pp. 1882-1893
    • An, J.H.1    Blackwell, T.K.2
  • 3
    • 0033931867 scopus 로고    scopus 로고
    • Assessing the accuracy of prediction algorithms for classification: An overview
    • Baldi P, Brunak S, Chauvin Y, Andersen CA, Nielsen H. 2000. Assessing the accuracy of prediction algorithms for classification: An overview. Bioinformatics 16: 412-424. (Pubitemid 30487963)
    • (2000) Bioinformatics , vol.16 , Issue.5 , pp. 412-424
    • Baldi, P.1    Brunak, S.2    Chauvin, Y.3    Andersen, C.A.F.4    Nielsen, H.5
  • 4
    • 80054728495 scopus 로고    scopus 로고
    • Animal transcription networks as highly connected, quantitative continua
    • Biggin MD. 2011. Animal transcription networks as highly connected, quantitative continua. Dev Cell 21: 611-626.
    • (2011) Dev Cell , vol.21 , pp. 611-626
    • Biggin, M.D.1
  • 5
    • 0026529831 scopus 로고
    • Skn-1, a maternally expressed gene required to specify the fate of ventral blastomeres in the early C. elegans embryo
    • Bowerman B, Eaton BA, Priess Jr. 1992. skn-1, a maternally expressed gene required to specify the fate of ventral blastomeres in the early C. elegans embryo. Cell 68: 1061-1075.
    • (1992) Cell , vol.68 , pp. 1061-1075
    • Bowerman, B.1    Eaton, B.A.2    Priess, J.R.3
  • 6
    • 47549100826 scopus 로고    scopus 로고
    • An elt-3/elt-5/elt-6 GATA Transcription Circuit Guides Aging in C. elegans
    • DOI 10.1016/j.cell.2008.05.044, PII S0092867408007071
    • Budovskaya YV, Wu K, Southworth LK, Jiang M, Tedesco P, Johnson TE, Kim SK. 2008. An elt-3/elt-5/elt-6 GATA transcription circuit guides aging in C. elegans. Cell 134: 291-303. (Pubitemid 352010330)
    • (2008) Cell , vol.134 , Issue.2 , pp. 291-303
    • Budovskaya, Y.V.1    Wu, K.2    Southworth, L.K.3    Jiang, M.4    Tedesco, P.5    Johnson, T.E.6    Kim, S.K.7
  • 7
    • 79952696158 scopus 로고    scopus 로고
    • A statistical framework for modeling gene expression using chromatin features and application to modENCODE datasets
    • Cheng C, Yan KK, Yip KY, Rozowsky J, Alexander R, Shou C, Gerstein M. 2011. A statistical framework for modeling gene expression using chromatin features and application to modENCODE datasets. Genome Biol 12: R15.
    • (2011) Genome Biol , vol.12
    • Cheng, C.1    Yan, K.K.2    Yip, K.Y.3    Rozowsky, J.4    Alexander, R.5    Shou, C.6    Gerstein, M.7
  • 9
    • 11144321614 scopus 로고    scopus 로고
    • Identification of thermosensory and olfactory neuron-specific genes via expression profiling of single neuron types
    • DOI 10.1016/j.cub.2004.12.030, PII S0960982204009662
    • Colosimo ME, Brown A, Mukhopadhyay S, Gabel C, Lanjuin AE, Samuel AD, Sengupta P. 2004. Identification of thermosensory and olfactory neuron-specific genes via expression profiling of single neuron types. Curr Biol 14: 2245-2251. (Pubitemid 40033361)
    • (2004) Current Biology , vol.14 , Issue.24 , pp. 2245-2251
    • Colosimo, M.E.1    Brown, A.2    Mukhopadhyay, S.3    Gabel, C.4    Lanjuin, A.E.5    Samuel, A.D.T.6    Sengupta, P.7
  • 11
    • 34247569105 scopus 로고    scopus 로고
    • Lifespan regulation by evolutionarily conserved genes essential for viability
    • Curran SP, Ruvkun G. 2007. Lifespan regulation by evolutionarily conserved genes essential for viability. PLoS Genet 3: e56.
    • (2007) PLoS Genet , vol.3
    • Curran, S.P.1    Ruvkun, G.2
  • 14
    • 18844460377 scopus 로고    scopus 로고
    • The myogenic potency of HLH-1 reveals wide-spread developmental plasticity in early C. elegans embryos
    • DOI 10.1242/dev.01774
    • Fukushige T, Krause M. 2005. The myogenic potency of HLH-1 reveals widespread developmental plasticity in early C. elegans embryos. Development 132: 1795-1805. (Pubitemid 40691770)
    • (2005) Development , vol.132 , Issue.8 , pp. 1795-1805
    • Fukushige, T.1    Krause, M.2
  • 15
    • 33845691406 scopus 로고    scopus 로고
    • Defining the transcriptional redundancy of early bodywall muscle development in C. elegans: Evidence for a unified theory of animal muscle development
    • DOI 10.1101/gad.1481706
    • Fukushige T, Brodigan TM, Schriefer LA, Waterston RH, Krause M. 2006. Defining the transcriptional redundancy of early bodywall muscle development in C. elegans: Evidence for a unified theory of animal muscle development. Genes Dev 20: 3395-3406. (Pubitemid 44969158)
    • (2006) Genes and Development , vol.20 , Issue.24 , pp. 3395-3406
    • Fukushige, T.1    Brodigan, T.M.2    Schriefer, L.A.3    Waterston, R.H.4    Krause, M.5
  • 16
    • 2942582468 scopus 로고    scopus 로고
    • Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
    • Gao F, Foat BC, Bussemaker HJ. 2004. Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data. BMC Bioinformatics 5: 31.
    • (2004) BMC Bioinformatics , vol.5 , pp. 31
    • Gao, F.1    Foat, B.C.2    Bussemaker, H.J.3
  • 18
    • 0036021375 scopus 로고    scopus 로고
    • Genetic analysis of tissue aging in Caenorhabditis elegans: A role for heat-shock factor and bacterial proliferation
    • Garigan D, Hsu AL, Fraser AG, Kamath RS, Ahringer J, Kenyon C. 2002. Genetic analysis of tissue aging in Caenorhabditis elegans: A role for heatshock factor and bacterial proliferation. Genetics 161: 1101-1112. (Pubitemid 34831435)
    • (2002) Genetics , vol.161 , Issue.3 , pp. 1101-1112
    • Garigan, D.1    Hsu, A.-L.2    Fraser, A.G.3    Kamath, R.S.4    Abringet, J.5    Kenyon, C.6
  • 19
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology
    • The Gene Ontology Consortium
    • The Gene Ontology Consortium. 2000. Gene ontology: Tool for the unification of biology. Nat Genet 25: 25-29.
    • (2000) Nat Genet , vol.25 , pp. 25-29
  • 23
    • 70349281405 scopus 로고    scopus 로고
    • Two Hox cofactors, the Meis/Hth homolog UNC-62 and the Pbx/Exd homolog CEH-20, function together during C. elegans postembryonic mesodermal development
    • Jiang Y, Shi H, Liu J. 2009. Two Hox cofactors, the Meis/Hth homolog UNC-62 and the Pbx/Exd homolog CEH-20, function together during C. elegans postembryonic mesodermal development. Dev Biol 334: 535-546.
    • (2009) Dev Biol , vol.334 , pp. 535-546
    • Jiang, Y.1    Shi, H.2    Liu, J.3
  • 24
    • 34250159524 scopus 로고    scopus 로고
    • Genome-wide mapping of in vivo protein-DNA interactions
    • DOI 10.1126/science.1141319
    • Johnson DS, Mortazavi A, Myers RM,Wold B. 2007. Genome-wide mapping of in vivo protein-DNA interactions. Science 316: 1497-1502. (Pubitemid 46906620)
    • (2007) Science , vol.316 , Issue.5830 , pp. 1497-1502
    • Johnson, D.S.1    Mortazavi, A.2    Myers, R.M.3    Wold, B.4
  • 27
    • 84860379799 scopus 로고    scopus 로고
    • Enhancer and promoter interactions: Long distance calls
    • Krivega I, Dean A. 2012. Enhancer and promoter interactions: Long distance calls. Curr Opin Genet Dev 22: 79-85.
    • (2012) Curr Opin Genet Dev , vol.22 , pp. 79-85
    • Krivega, I.1    Dean, A.2
  • 28
    • 84867188407 scopus 로고    scopus 로고
    • Transcription factor redundancy and tissue-specific regulation: Evidence from functional and physical network connectivity
    • Kuntz SG, Williams BA, Sternberg PW, Wold BJ. 2012. Transcription factor redundancy and tissue-specific regulation: Evidence from functional and physical network connectivity. Genome Res 22: 1907-1919.
    • (2012) Genome Res , vol.22 , pp. 1907-1919
    • Kuntz, S.G.1    Williams, B.A.2    Sternberg, P.W.3    Wold, B.J.4
  • 29
    • 84860503075 scopus 로고    scopus 로고
    • HOT regions function as patterned developmental enhancers and have a distinct cis-regulatory signature
    • Kvon EZ, Stampfel G, Yanez-Cuna JO, Dickson BJ, Stark A. 2012. HOT regions function as patterned developmental enhancers and have a distinct cis-regulatory signature. Genes Dev 26: 908-913.
    • (2012) Genes Dev , vol.26 , pp. 908-913
    • Kvon, E.Z.1    Stampfel, G.2    Yanez-Cuna, J.O.3    Dickson, B.J.4    Stark, A.5
  • 30
    • 77957243164 scopus 로고    scopus 로고
    • ChEA: Transcription factor regulation inferred from integrating genome-wide ChIP-X experiments
    • Lachmann A, Xu H, Krishnan J, Berger SI, Mazloom AR, Ma'ayan A. 2010. ChEA: Transcription factor regulation inferred from integrating genome-wide ChIP-X experiments. Bioinformatics 26: 2438-2444.
    • (2010) Bioinformatics , vol.26 , pp. 2438-2444
    • Lachmann, A.1    Xu, H.2    Krishnan, J.3    Berger, S.I.4    Mazloom, A.R.5    Ma'Ayan, A.6
  • 31
    • 79551702083 scopus 로고    scopus 로고
    • Identifying a transcription factor's regulatory targets from its binding targets
    • Lai F, Chang JS, Wu WS. 2010. Identifying a transcription factor's regulatory targets from its binding targets. Gene Regul Syst Bio 4: 125-133.
    • (2010) Gene Regul Syst Bio , vol.4 , pp. 125-133
    • Lai, F.1    Chang, J.S.2    Wu, W.S.3
  • 32
    • 67650721263 scopus 로고    scopus 로고
    • Caudal-like PAL-1 directly activates the bodywall muscle module regulator hlh-1 in C. elegans to initiate the embryonic muscle gene regulatory network
    • Lei H, Liu J, Fukushige T, Fire A, Krause M. 2009. Caudal-like PAL-1 directly activates the bodywall muscle module regulator hlh-1 in C. elegans to initiate the embryonic muscle gene regulatory network. Development 136: 1241-1249.
    • (2009) Development , vol.136 , pp. 1241-1249
    • Lei, H.1    Liu, J.2    Fukushige, T.3    Fire, A.4    Krause, M.5
  • 34
    • 68849103482 scopus 로고    scopus 로고
    • Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions
    • MacArthur S, Li XY, Li J, Brown JB, Chu HC, Zeng L, Grondona BP, Hechmer A, Simirenko L, Keranen SV, et al. 2009. Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions. Genome Biol 10: R80.
    • (2009) Genome Biol , vol.10
    • Macarthur, S.1    Li, X.Y.2    Li, J.3    Brown, J.B.4    Chu, H.C.5    Zeng, L.6    Grondona, B.P.7    Hechmer, A.8    Simirenko, L.9    Keranen, S.V.10
  • 35
    • 0035265680 scopus 로고    scopus 로고
    • Restriction of mesendoderm to a single blastomere by the combined action of SKN-1 and a GSK-3β homolog is mediated by MED-1 and -2 in C. elegans
    • DOI 10.1016/S1097-2765(01)00195-2
    • Maduro MF, Meneghini MD, Bowerman B, Broitman-Maduro G, Rothman JH. 2001. Restriction of mesendoderm to a single blastomere by the combined action of SKN-1 and a GSK-3b homolog is mediated by MED-1 and -2 in C. elegans. Mol Cell 7: 475-485. (Pubitemid 32706340)
    • (2001) Molecular Cell , vol.7 , Issue.3 , pp. 475-485
    • Maduro, M.F.1    Meneghini, M.D.2    Bowerman, B.3    Broitman-Maduro, G.4    Rothman, J.H.5
  • 36
    • 84863537088 scopus 로고    scopus 로고
    • Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks
    • Marbach D, Roy S, Ay F,Meyer PE, Candeias R, Kahveci T, Bristow CA, Kellis M. 2012. Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks. Genome Res 22: 1334-1349.
    • (2012) Genome Res , vol.22 , pp. 1334-1349
    • Marbach, D.1    Roy, S.2    Ay, F.3    Meyer, P.E.4    Candeias, R.5    Kahveci, T.6    Bristow, C.A.7    Kellis, M.8
  • 37
    • 0033571295 scopus 로고    scopus 로고
    • Expression and function of members of a divergent nuclear receptor family in Caenorhabditis elegans
    • Miyabayashi T, Palfreyman MT, Sluder AE, Slack F, Sengupta P. 1999. Expression and function of members of a divergent nuclear receptor family in Caenorhabditis elegans. Dev Biol 215: 314-331.
    • (1999) Dev Biol , vol.215 , pp. 314-331
    • Miyabayashi, T.1    Palfreyman, M.T.2    Sluder, A.E.3    Slack, F.4    Sengupta, P.5
  • 38
    • 78650331647 scopus 로고    scopus 로고
    • Identification of functional elements and regulatory circuits by Drosophila modENCODE
    • The modENCODE Consortium
    • The modENCODE Consortium. 2010. Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science 330: 1787-1797.
    • (2010) Science , vol.330 , pp. 1787-1797
  • 42
    • 45449111373 scopus 로고    scopus 로고
    • Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites
    • DOI 10.1016/j.cell.2008.05.023, PII S009286740800682X
    • Noyes MB, Christensen RG, Wakabayashi A, Stormo GD, Brodsky MH, Wolfe SA. 2008. Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites. Cell 133: 1277-1289. (Pubitemid 351852912)
    • (2008) Cell , vol.133 , Issue.7 , pp. 1277-1289
    • Noyes, M.B.1    Christensen, R.G.2    Wakabayashi, A.3    Stormo, G.D.4    Brodsky, M.H.5    Wolfe, S.A.6
  • 43
    • 66149175591 scopus 로고    scopus 로고
    • Oxidative stress and longevity in Caenorhabditis elegans as mediated by SKN-1
    • Park SK, Tedesco PM, Johnson TE. 2009. Oxidative stress and longevity in Caenorhabditis elegans as mediated by SKN-1. Aging Cell 8: 258-269.
    • (2009) Aging Cell , vol.8 , pp. 258-269
    • Park, S.K.1    Tedesco, P.M.2    Johnson, T.E.3
  • 44
    • 32244446124 scopus 로고    scopus 로고
    • Chromosomal clustering and GATA transcriptional regulation of intestine-expressed genes in C. elegans
    • DOI 10.1242/dev.02185
    • Pauli F, Liu Y, Kim YA, Chen PJ, Kim SK. 2006. Chromosomal clustering and GATA transcriptional regulation of intestine-expressed genes in C. elegans. Development 133: 287-295. (Pubitemid 43210717)
    • (2006) Development , vol.133 , Issue.2 , pp. 287-295
    • Pauli, F.1    Liu, Y.2    Kim, Y.A.3    Chen, P.-J.4    Kim, S.K.5
  • 45
    • 67349124418 scopus 로고    scopus 로고
    • Trithorax, Hox, and TALE-class homeodomain proteins ensure cell survival through repression of the BH3-only gene egl-1
    • Potts MB, Wang DP, Cameron S. 2009. Trithorax, Hox, and TALE-class homeodomain proteins ensure cell survival through repression of the BH3-only gene egl-1. Dev Biol 329: 374-385.
    • (2009) Dev Biol , vol.329 , pp. 374-385
    • Potts, M.B.1    Wang, D.P.2    Cameron, S.3
  • 46
    • 67349276677 scopus 로고    scopus 로고
    • Increased age reduces DAF-16 and SKN-1 signaling and the hormetic response of Caenorhabditis elegans to the xenobiotic juglone
    • Przybysz AJ, Choe KP, Roberts LJ, Strange K. 2009. Increased age reduces DAF-16 and SKN-1 signaling and the hormetic response of Caenorhabditis elegans to the xenobiotic juglone. Mech Ageing Dev 130: 357-369.
    • (2009) Mech Ageing Dev , vol.130 , pp. 357-369
    • Przybysz, A.J.1    Choe, K.P.2    Roberts, L.J.3    Strange, K.4
  • 47
    • 33846964132 scopus 로고    scopus 로고
    • Insight into transcription factor gene duplication from Caenorhabditis elegans Promoterome-driven expression patterns
    • Reece-Hoyes JS, Shingles J, Dupuy D, Grove CA,Walhout AJ, Vidal M, Hope IA. 2007. Insight into transcription factor gene duplication from Caenorhabditis elegans Promoterome-driven expression patterns. BMC Genomics 8: 27.
    • (2007) BMC Genomics , vol.8 , pp. 27
    • Reece-Hoyes, J.S.1    Shingles, J.2    Dupuy, D.3    Grove, C.A.4    Walhout, A.J.5    Vidal, M.6    Hope, I.A.7
  • 49
    • 0037194732 scopus 로고    scopus 로고
    • Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans
    • DOI 10.1038/nature01012
    • Roy PJ, Stuart JM, Lund J, Kim SK. 2002. Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans. Nature 418: 975-979. (Pubitemid 34976032)
    • (2002) Nature , vol.418 , Issue.6901 , pp. 975-979
    • Roy, P.J.1    Stuart, J.M.2    Lund, J.3    Kim, S.K.4
  • 50
    • 79955622698 scopus 로고    scopus 로고
    • Variable pathogenicity determines individual lifespan in Caenorhabditis elegans
    • Sanchez-Blanco A, Kim SK. 2011. Variable pathogenicity determines individual lifespan in Caenorhabditis elegans. PLoS Genet 7: e1002047.
    • (2011) PLoS Genet , vol.7
    • Sanchez-Blanco, A.1    Kim, S.K.2
  • 52
    • 84862799740 scopus 로고    scopus 로고
    • MAnorm: A robust model for quantitative comparison of ChIP-Seq data sets
    • Shao Z, Zhang Y, Yuan GC, Orkin SH,Waxman DJ. 2012. MAnorm: A robust model for quantitative comparison of ChIP-Seq data sets. Genome Biol 13: R16.
    • (2012) Genome Biol , vol.13
    • Shao, Z.1    Zhang, Y.2    Yuan, G.C.3    Orkin, S.H.4    Waxman, D.J.5
  • 55
    • 84865249952 scopus 로고    scopus 로고
    • Transcription factors: From enhancer binding to developmental control
    • Spitz F, Furlong EE. 2012. Transcription factors: From enhancer binding to developmental control. Nat Rev Genet 13: 613-626.
    • (2012) Nat Rev Genet , vol.13 , pp. 613-626
    • Spitz, F.1    Furlong, E.E.2
  • 56
    • 17244377445 scopus 로고    scopus 로고
    • Alternative splicing of mouse transcription factors affects their DNA-binding domain architecture and is tissue specific
    • Taneri B, Snyder B, Novoradovsky A, Gaasterland T. 2004. Alternative splicing of mouse transcription factors affects their DNA-binding domain architecture and is tissue specific. Genome Biol 5: R75.
    • (2004) Genome Biol , vol.5
    • Taneri, B.1    Snyder, B.2    Novoradovsky, A.3    Gaasterland, T.4
  • 58
    • 40849118472 scopus 로고    scopus 로고
    • Direct inhibition of the longevity-promoting factor SKN-1 by insulin-like signaling in C. elegans
    • DOI 10.1016/j.cell.2008.01.030, PII S009286740800130X
    • Tullet JM, Hertweck M, An JH, Baker J, Hwang JY, Liu S, Oliveira RP, Baumeister R, Blackwell TK. 2008. Direct inhibition of the longevity-promoting factor SKN-1 by insulin-like signaling in C. elegans. Cell 132: 1025-1038. (Pubitemid 351391953)
    • (2008) Cell , vol.132 , Issue.6 , pp. 1025-1038
    • Tullet, J.M.A.1    Hertweck, M.2    An, J.H.3    Baker, J.4    Hwang, J.Y.5    Liu, S.6    Oliveira, R.P.7    Baumeister, R.8    Blackwell, T.K.9
  • 60
    • 0036826906 scopus 로고    scopus 로고
    • Roles of the homethorax/Meis/Prep homolog UNC-62 and the Exd/Pbx homologs CEH-20 and CEH-40 in C. elegans embryogenesis
    • Van Auken K, Weaver D, Robertson B, Sundaram M, Saldi T, Edgar L, Elling U, Lee M, Boese Q,Wood WB. 2002. Roles of the Homothorax/Meis/Prep homolog UNC-62 and the Exd/Pbx homologs CEH-20 and CEH-40 in C. elegans embryogenesis. Development 129: 5255-5268. (Pubitemid 35460688)
    • (2002) Development , vol.129 , Issue.22 , pp. 5255-5268
    • Van Auken, K.1    Weaver, D.2    Robertson, B.3    Sundaram, M.4    Saldi, T.5    Edgar, L.6    Elling, U.7    Lee, M.8    Boese, Q.9    Wood, W.B.10
  • 61
    • 84874766842 scopus 로고    scopus 로고
    • Roles of the developmental regulator unc-62/Homothorax in limiting longevity in Caenorhabditis elegans
    • Van Nostrand EL, Sánchez-Blanco A,Wu B, Nguyen A, Kim SK. 2013. Roles of the developmental regulator unc-62/Homothorax in limiting longevity in Caenorhabditis elegans. PLoS Genet 9: e1003325.
    • (2013) PLoS Genet , vol.9
    • Van Nostrand, E.L.1    Sánchez-Blanco, A.2    Wu, B.3    Nguyen, A.4    Kim, S.K.5
  • 62
  • 63
    • 32444443212 scopus 로고    scopus 로고
    • Transcriptional upregulation of the C. elegans Hox gene lin-39 during vulval cell fate specification
    • DOI 10.1016/j.mod.2005.11.003, PII S0925477305001887
    • Wagmaister JA, Gleason JE, Eisenmann DM. 2006. Transcriptional upregulation of the C. elegans Hox gene lin-39 during vulval cell fate specification. Mech Dev 123: 135-150. (Pubitemid 43227941)
    • (2006) Mechanisms of Development , vol.123 , Issue.2 , pp. 135-150
    • Wagmaister, J.A.1    Gleason, J.E.2    Eisenmann, D.M.3
  • 65
    • 17244373421 scopus 로고    scopus 로고
    • The roles of two C. elegans HOX co-factor orthologs in cell migration and vulva development
    • DOI 10.1242/dev.01569
    • Yang L, Sym M, Kenyon C. 2005. The roles of two C. elegans HOX co-factor orthologs in cell migration and vulva development. Development 132: 1413-1428. (Pubitemid 40528799)
    • (2005) Development , vol.132 , Issue.6 , pp. 1413-1428
    • Yang, L.1    Sym, M.2    Kenyon, C.3
  • 66
    • 80051699717 scopus 로고    scopus 로고
    • OASIS: Online application for the survival analysis of lifespan assays performed in aging research
    • Yang JS, Nam HJ, Seo M, Han SK, Choi Y, Nam HG, Lee SJ, Kim S. 2011. OASIS: Online application for the survival analysis of lifespan assays performed in aging research. PLoS ONE 6: e23525.
    • (2011) PLoS ONE , vol.6
    • Yang, J.S.1    Nam, H.J.2    Seo, M.3    Han, S.K.4    Choi, Y.5    Nam, H.G.6    Lee, S.J.7    Kim, S.8
  • 68
    • 84864452368 scopus 로고    scopus 로고
    • Cscan: Finding common regulators of a set of genes by using a collection of genome-wide ChIPseq datasets
    • Zambelli F, Prazzoli GM, Pesole G, Pavesi G. 2012. Cscan: Finding common regulators of a set of genes by using a collection of genome-wide ChIPseq datasets. Nucleic Acids Res 40: W510-W515.
    • (2012) Nucleic Acids Res , vol.40
    • Zambelli, F.1    Prazzoli, G.M.2    Pesole, G.3    Pavesi, G.4
  • 70
    • 77649225979 scopus 로고    scopus 로고
    • Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response
    • Zhong M, Niu W, Lu ZJ, Sarov M, Murray JI, Janette J, Raha D, Sheaffer KL, Lam HY, Preston E, et al. 2010. Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response. PLoS Genet 6: e1000848.
    • (2010) PLoS Genet , vol.6
    • Zhong, M.1    Niu, W.2    Lu, Z.J.3    Sarov, M.4    Murray, J.I.5    Janette, J.6    Raha, D.7    Sheaffer, K.L.8    Lam, H.Y.9    Preston, E.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.