-
1
-
-
0034704248
-
Genome-wide location and function of DNA binding proteins
-
DOI 10.1126/science.290.5500.2306
-
Ren, B. et al. Genome-wide location and function of DNAbinding proteins. Science 290, 2306-2309 (2000). (Pubitemid 32041573)
-
(2000)
Science
, vol.290
, Issue.5500
, pp. 2306-2309
-
-
Ren, B.1
Robert, F.2
Wyrick, J.J.3
Aparicio, O.4
Jennings, E.G.5
Simon, I.6
Zeitlinger, J.7
Schreiber, J.8
Hannett, N.9
Kanin, E.10
Volkert, T.L.11
Wilson, C.J.12
Bell, S.P.13
Young, R.A.14
-
2
-
-
34250159524
-
Genome-wide mapping of in vivo protein-DNA interactions
-
DOI 10.1126/science.1141319
-
Johnson, D. S., Mortazavi, A., Myers, R. M. &Wold, B. Genome-wide mapping of in vivo protein-DNA interactions. Science 316, 1497-1502 (2007). (Pubitemid 46906620)
-
(2007)
Science
, vol.316
, Issue.5830
, pp. 1497-1502
-
-
Johnson, D.S.1
Mortazavi, A.2
Myers, R.M.3
Wold, B.4
-
3
-
-
65549104157
-
Histone modifications at human enhancers reflect global cell-type-specific gene expression
-
Heintzman, N. D. et al. Histone modifications at human enhancers reflect global cell-type-specific gene expression. Nature 459, 108-112 (2009).
-
(2009)
Nature
, vol.459
, pp. 108-112
-
-
Heintzman, N.D.1
-
4
-
-
33847084602
-
Genome regulation by polycomb and trithorax proteins
-
DOI 10.1016/j.cell.2007.02.009, PII S0092867407001900
-
Schuettengruber, B., Chourrout, D., Vervoort, M., Leblanc, B. &Cavalli, G. Genome regulation by polycomb and trithorax proteins. Cell 128, 735-745 (2007). (Pubitemid 46273581)
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 735-745
-
-
Schuettengruber, B.1
Chourrout, D.2
Vervoort, M.3
Leblanc, B.4
Cavalli, G.5
-
5
-
-
77957776228
-
Systematic protein location mapping reveals five principal chromatin types in Drosophila cells
-
Filion, G. J. et al. Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. Cell 143, 212-224 (2010).
-
(2010)
Cell
, vol.143
, pp. 212-224
-
-
Filion, G.J.1
-
6
-
-
40149095913
-
Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm
-
Li, X. Y. et al. Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm. PLoS Biol. 6, e27 (2008).
-
(2008)
PLoS Biol.
, vol.6
-
-
Li, X.Y.1
-
7
-
-
68849103482
-
Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions
-
MacArthur, S. et al. Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions. Genome Biol. 10, R80 (2009).
-
(2009)
Genome Biol.
, vol.10
-
-
MacArthur, S.1
-
8
-
-
36549013619
-
RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo
-
DOI 10.1038/ng.2007.26, PII NG200726
-
Zeitlinger, J. et al. RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo. Nature Genet. 39, 1512-1516 (2007). (Pubitemid 350191345)
-
(2007)
Nature Genetics
, vol.39
, Issue.12
, pp. 1512-1516
-
-
Zeitlinger, J.1
Stark, A.2
Kellis, M.3
Hong, J.-W.4
Nechaev, S.5
Adelman, K.6
Levine, M.7
Young, R.A.8
-
9
-
-
70449132583
-
Combinatorial bindingpredicts spatio-temporal cis-regulatory activity
-
Zinzen, R. P., Girardot, C., Gagneur, J., Braun, M. &Furlong, E. E. Combinatorial bindingpredicts spatio-temporal cis-regulatory activity.Nature 462,65-70(2009).
-
(2009)
Nature
, vol.462
, pp. 65-70
-
-
Zinzen, R.P.1
Girardot, C.2
Gagneur, J.3
Braun, M.4
Furlong, E.E.5
-
10
-
-
76749089660
-
A comprehensive map of insulator elements for the Drosophila genome
-
Nègre, N. et al. A comprehensive map of insulator elements for the Drosophila genome. PLoS Genet. 6, e1000814 (2010).
-
(2010)
PLoS Genet.
, vol.6
-
-
Nègre, N.1
-
11
-
-
33847334699
-
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
-
Heintzman,N.D. et al. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. NatureGenet.39,311-318(2007).
-
(2007)
Nature Genet
, vol.39
, pp. 311-318
-
-
Heintzman, N.D.1
-
12
-
-
0036499971
-
Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing
-
DOI 10.1093/emboj/21.5.1121
-
Schotta, G. et al. Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylationandheterochromatic gene silencing.EMBOJ.21, 1121-1131(2002). (Pubitemid 34206185)
-
(2002)
EMBO Journal
, vol.21
, Issue.5
, pp. 1121-1131
-
-
Schotta, G.1
Ebert, A.2
Krauss, V.3
Fischer, A.4
Hoffmann, J.5
Rea, S.6
Jenuwein, T.7
Dorn, R.8
Reuter, G.9
-
13
-
-
44149105533
-
The emerging functions of histone demethylases
-
DOI 10.1016/j.gde.2007.12.003, PII S0959437X07002158
-
Agger, K., Christensen, J., Cloos, P. A. &Helin, K. The emerging functions of histone demethylases. Curr. Opin. Genet. Dev. 18, 159-168 (2008). (Pubitemid 351749815)
-
(2008)
Current Opinion in Genetics and Development
, vol.18
, Issue.2
, pp. 159-168
-
-
Agger, K.1
Christensen, J.2
Cloos, P.A.3
Helin, K.4
-
14
-
-
60149091656
-
ChIP-seq accurately predicts tissue-specific activity of enhancers
-
Visel, A. et al. ChIP-seq accurately predicts tissue-specific activity of enhancers. Nature 457, 854-858 (2009).
-
(2009)
Nature
, vol.457
, pp. 854-858
-
-
Visel, A.1
-
15
-
-
52949106124
-
Stability and dynamics of polycomb target sites in Drosophila development
-
Kwong, C. et al. Stability and dynamics of polycomb target sites in Drosophila development. PLoS Genet. 4, e1000178 (2008).
-
(2008)
PLoS Genet.
, vol.4
-
-
Kwong, C.1
-
16
-
-
61349098460
-
Differential chromatin marking of introns and expressed exons by H3K36me3
-
Kolasinska-Zwierz, P. et al. Differential chromatin marking of introns and expressed exons by H3K36me3. Nature Genet. 41, 376-381 (2009).
-
(2009)
Nature Genet.
, vol.41
, pp. 376-381
-
-
Kolasinska-Zwierz, P.1
-
17
-
-
79551610291
-
Genome-wide analysis of promoter architecture in Drosophila melanogaster
-
Hoskins, R. A. et al. Genome-wide analysis of promoter architecture in Drosophila melanogaster. Genome Res. 21, 182-192 (2011).
-
(2011)
Genome Res.
, vol.21
, pp. 182-192
-
-
Hoskins, R.A.1
-
18
-
-
78650410139
-
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project
-
Gerstein, M. B. et al. Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science 330, 1775-1787 (2010).
-
(2010)
Science
, vol.330
, pp. 1775-1787
-
-
Gerstein, M.B.1
-
19
-
-
33747072322
-
Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster
-
DOI 10.1073/pnas.0605003103
-
Moorman, C. et al. Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster. Proc. Natl Acad. Sci. USA 103, 12027-12032 (2006). (Pubitemid 44215805)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.32
, pp. 12027-12032
-
-
Moorman, C.1
Sun, L.V.2
Wang, J.3
De Wit, E.4
Talhout, W.5
Ward, L.D.6
Greil, F.7
Lu, X.-J.8
White, K.P.9
Bussemaker, H.J.10
Van Steensel, B.11
-
20
-
-
61849170193
-
Genome-wide profiling of salt fractionsmaps physical properties of chromatin
-
Henikoff, S., Henikoff, J. G., Sakai, A., Loeb, G. B.&Ahmad, K.Genome-wide profiling of salt fractionsmaps physical properties of chromatin. GenomeRes. 19, 460-469 (2009).
-
(2009)
GenomeRes.
, vol.19
, pp. 460-469
-
-
Henikoff, S.1
Henikoff, J.G.2
Sakai, A.3
Loeb, G.B.4
Ahmad, K.5
-
21
-
-
6044243723
-
Direct integration of Hox and segmentation gene inputs during Drosophila development
-
DOI 10.1038/nature02946
-
Gebelein, B., McKay, D. J. &Mann, R. S. Direct integration of Hox and segmentation gene inputs during Drosophila development. Nature 431, 653-659 (2004). (Pubitemid 39382605)
-
(2004)
Nature
, vol.431
, Issue.7009
, pp. 653-659
-
-
Gebelein, B.1
McKay, D.J.2
Mann, R.S.3
-
22
-
-
0034604339
-
Senseless a Zn finger transcription factor, is necessary and sufficient for sensory organ development in Drosophila
-
Nolo, R., Abbott, L. A. &Bellen, H. J. Senseless, a Zn finger transcription factor, is necessary and sufficient for sensory organ development in Drosophila. Cell 102, 349-362 (2000).
-
(2000)
Cell
, vol.102
, pp. 349-362
-
-
Nolo, R.1
Abbott, L.A.2
Bellen, H.J.3
-
23
-
-
34250340159
-
Drosophila brakeless interacts with atrophin and is required for tailless-mediated transcriptional repression in early embryos
-
Haecker, A. et al. Drosophila brakeless interacts with atrophin and is required for tailless-mediated transcriptional repression in early embryos. PLoS Biol. 5, e145 (2007).
-
(2007)
PLoS Biol.
, vol.5
-
-
Haecker, A.1
-
24
-
-
0029015420
-
Activationofposterior gap gene expression in the Drosophila blastoderm
-
Rivera-Pomar, R.,Lu, X., Perrimon, N., Taubert, H.&Jackle, H. Activationofposterior gap gene expression in the Drosophila blastoderm. Nature 376, 253-256 (1995).
-
(1995)
Nature
, vol.376
, pp. 253-256
-
-
Rivera-Pomar, R.1
Lu, X.2
Perrimon, N.3
Taubert, H.4
Jackle, H.5
-
25
-
-
0037440460
-
SNR1 is an essential subunit in a subset of Drosophila brm complexes, targeting specific functions during development
-
DOI 10.1016/S0012-1606(02)00011-8, PII S0012160602000118
-
Zraly,C. B. et al.SNR1isanessentialsubunit inasubset ofDrosophilabrmcomplexes, targeting specific functions during development. Dev. Biol. 253, 291-308 (2003). (Pubitemid 36259889)
-
(2003)
Developmental Biology
, vol.253
, Issue.2
, pp. 291-308
-
-
Zraly, C.B.1
Marenda, D.R.2
Nanchal, R.3
Cavalli, G.4
Muchardt, C.5
Dingwall, A.K.6
-
26
-
-
0025009264
-
Metamorphosis of the central nervous system of Drosophila
-
Truman, J. W. Metamorphosis of the central nervous system of Drosophila. J. Neurobiol. 21, 1072-1084 (1990). (Pubitemid 20362728)
-
(1990)
Journal of Neurobiology
, vol.21
, Issue.7
, pp. 1072-1084
-
-
Truman, J.W.1
-
27
-
-
33645514645
-
Genome-wide analyses identify transcription factors required for proper morphogenesis of Drosophila sensory neuron dendrites
-
Parrish, J. Z., Kim, M. D., Jan, L. Y. &Jan, Y. N. Genome-wide analyses identify transcription factors required for proper morphogenesis of Drosophila sensory neuron dendrites. Genes Dev. 20, 820-835 (2006).
-
(2006)
Genes Dev.
, vol.20
, pp. 820-835
-
-
Parrish, J.Z.1
Kim, M.D.2
Jan, L.Y.3
Jan, Y.N.4
|