A CO-FISH assay to assess sister chromatid segregation patterns in mitosis of mouse embryonic stem cells

Chromosome Research

Volumn 21, Issue 3, 2013, Pages 311-328

  Sauer, Stephan ^a,b   Burkett, Sandra S ^b   Lewandoski, Mark ^b   Klar, Amar J S ^a  

^a NATIONAL CANCER INSTITUTE   (United States)

^b NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

Asymmetric cell division mechanism; mouse stem cell biology and cell differentiation; somatic strand segregation

Indexed keywords

BROXURIDINE;

ANIMAL CELL; ARTICLE; CHROMOSOME 7; CHROMOSOME ORIENTATION FLUORESCENCE IN SITU HYBRIDIZATION; CHROMOSOME SEGREGATION; CONTROLLED STUDY; DNA PROBE; EMBRYO; EMBRYONIC STEM CELL; FLUORESCENCE IN SITU HYBRIDIZATION; IN VITRO STUDY; MITOSIS; MOUSE; NONHUMAN; PRIORITY JOURNAL; SISTER CHROMATID; TELOMERE;

ANIMALS; BROMODEOXYURIDINE; CELL SURVIVAL; CHROMATIDS; CHROMOSOME SEGREGATION; CHROMOSOMES, MAMMALIAN; EMBRYONIC STEM CELLS; IN SITU HYBRIDIZATION, FLUORESCENCE; MICE; MITOSIS;

EID: 84878653947     PISSN: 09673849     EISSN: 15736849     Source Type: Journal    
DOI: 10.1007/s10577-013-9358-8     Document Type: Article

References (34)

1. Armakolas A, Klar AJ (2006) Cell type regulates selective segregation of mouse chromosome 7 DNA strands in mitosis. Science 311:1146-1149
2. Armakolas A, Klar AJ (2007) Left-right dynein motor implicated in selective chromatid segregation in mouse cells. Science 315:100-101
3. Ashman CR, Davidson RL (1981) Bromodeoxyuridine mutagenesis in mammalian cells is related to deoxyribonucleotide pool imbalance. Mol Cell Biol 1:254-260
4. Bailey SM, Cornforth MN, Kurimasa A, Chen DJ, Goodwin EH (2001) Strand-specific postreplicative processing of mammalian telomeres. Science 293:2462-2465
5. Booth BW, Boulanger CA, Smith GH (2008) Selective segregation of DNA strands persists in long-label-retaining mammary cells during pregnancy. Breast Cancer Res 10:R90
6. Boy de la Tour E, Laemmli UK (1988) The metaphase scaffold is helically folded: sister chromatids have predominantly opposite helical handedness. Cell 55:937-944
7. Conboy MJ, Karasov AO, Rando TA (2007) High incidence of non-random template strand segregation and asymmetric fate determination in dividing stem cells and their progeny. PLoS Biol 5:e102
8. Davidson RL, Kaufman ER (1978) Bromodeoxyuridine mutagenesis in mammalian cells is stimulated by thymidine and suppressed by deoxycytidine. Nature 276:722-723
9. Falconer E, Chavez E, Henderson A, Lansdorp PM (2010a) Chromosome orientation fluorescence in situ hybridization to study sister chromatid segregation in vivo. Nat Protoc 5:1362-1377
10. Falconer E, Chavez EA, Henderson A, Poon SS, McKinney S, Brown L, Huntsman DG, Lansdorp PM (2010b) Identification of sister chromatids by DNA template strand sequences. Nature 463:93-97
11. Falconer E, Hills M, Naumann U, Poon SS, Chavez EA, Sanders AD, Zhao Y, Hirst M, Lansdorp PM (2012) DNA template strand sequencing of single-cells maps genomic rearrangements at high resolution. Nat Methods 9:1107-1112
12. Guo G, Huang Y, Humphreys P, Wang X, Smith A (2009) A PiggyBac-based recessive screening method to identify pluripotency regulators. PLoS One 6:e18189
13. Guo J, Jauch A, Heidi HG, Schoell B, Erz D, Schrank M, Janssen JW (2005) Multicolor karyotype analyses of mouse embryonic stem cells. In Vitro Cell Dev Biol Anim 41:278-283
14. Haber JE (2006) Comment on «Cell type regulates selective segregation of mouse chromosome 7 DNA strands in mitosis». Science 313:1045; author reply 1045
15. Hari D, Xin HW, Jaiswal K, Wiegand G, Kim BK, Ambe C, Burka D, Koizumi T, Ray S, Garfield S, Thorgeirsson S, Avital I (2011) Isolation of live label-retaining cells and cells undergoing asymmetric cell division via nonrandom chromosomal cosegregation from human cancers. Stem Cells Dev 20:1649-1658
16. Henegariu O, Heerema NA, Lowe Wright L, Bray-Ward P, Ward DC, Vance GH (2001) Improvements in cytogenetic slide preparation: controlled chromosome spreading, chemical aging and gradual denaturing. Cytometry 43:101-109
17. Klar AJ (1994) A model for specification of the left-right axis in vertebrates. Trends Genet 10:392-396
18. Klar AJ (2007) Lessons learned from studies of fission yeast mating-type switching and silencing. Annu Rev Genet 41:213-236
19. Klar AJ (2008) Support for the selective chromatid segregation hypothesis advanced for the mechanism of left-right body axis development in mice. Breast Dis 29:47-56
20. Lin T, Chao C, Saito S, Mazur SJ, Murphy ME, Appella E, Xu Y (2005) p53 induces differentiation of mouse embryonic stem cells by suppressing Nanog expression. Nat Cell Biol 7:165-171
21. Liu P, Jenkins NA, Copeland NG (2002) Efficient Cre-loxP-induced mitotic recombination in mouse embryonic stem cells. Nat Genet 30:66-72
22. Meuth M, Green H (1974) Induction of a deoxycytidineless state in cultured mammalian cells by bromodeoxyuridine. Cell 2:109-112
23. Nakano S, Stillman B, Horvitz HR (2011) Replication-coupled chromatin assembly generates a neuronal bilateral asymmetry in C. elegans. Cell 147:1525-1536
24. Pettitt SJ, Liang Q, Rairdan XY, Moran JL, Prosser HM, Beier DR, Lloyd KC, Bradley A, Skarnes WC (2009) Agouti C57BL/6N embryonic stem cells for mouse genetic resources. Nat Methods 6:493-495
25. Pine SR, Ryan BM, Varticovski L, Robles AI, Harris CC (2010) Microenvironmental modulation of asymmetric cell division in human lung cancer cells. Proc Natl Acad Sci U S A 107:2195-2200
26. Rocheteau P, Gayraud-Morel B, Siegl-Cachedenier I, Blasco MA, Tajbakhsh S (2012) A subpopulation of adult skeletal muscle stem cells retains all template DNA strands after cell division. Cell 148:112-125
27. Sauer S, Klar AJ (2012) Left-right symmetry breaking in mice by left-right dynein may occur via a biased chromatid segregation mechanism, without directly involving the Nodal gene. Front Oncol 2:166
28. Silva J, Barrandon O, Nichols J, Kawaguchi J, Theunissen TW, Smith A (2008) Promotion of reprogramming to ground state pluripotency by signal inhibition. PLoS Biol 6:e253
29. Singh G, Klar AJ (2007) A hypothesis for how chromosome 11 translocations cause psychiatric disorders. Genetics 177:1259-1262
30. Smith CE, Llorente B, Symington LS (2007) Template switching during break-induced replication. Nature 447:102-105
31. Telenius H, Carter NP, Bebb CE, Nordenskjold M, Ponder BA, Tunnacliffe A (1992a) Degenerate oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer. Genomics 13:718-725
32. Telenius H, Pelmear AH, Tunnacliffe A, Carter NP, Behmel A, Ferguson-Smith MA, Nordenskjold M, Pfragner R, Ponder BA (1992b) Cytogenetic analysis by chromosome painting using DOP-PCR amplified flow-sorted chromosomes. Genes Chromosomes Cancer 4:257-263
33. Ye ZJ, Kluger Y, Lian Z, Weissman SM (2005) Two types of precursor cells in a multipotential hematopoietic cell line. Proc Natl Acad Sci U S A 102:18461-18466
34. Yu C, Bonaduce MJ, Klar AJ (2013) Defining the epigenetic mechanism of asymmetric cell division of Schizosaccharomyces japonicus yeast. Genetics 193:85-94