메뉴 건너뛰기




Volumn 153, Issue 5, 2013, Pages 988-

XGlobal regulation of promoter melting in naive lymphocytes

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; HELICASE; SINGLE STRANDED DNA; TRANSCRIPTION FACTOR IIH; UNCLASSIFIED DRUG; XPB HELICASE; XPD HELICASE;

EID: 84878315605     PISSN: 00928674     EISSN: 10974172     Source Type: Journal    
DOI: 10.1016/j.cell.2013.04.033     Document Type: Article
Times cited : (137)

References (82)
  • 3
    • 3142725514 scopus 로고    scopus 로고
    • The analysis of stress-induced duplex destabilization in long genomic DNA sequences
    • C.J. Benham, and C. Bi The analysis of stress-induced duplex destabilization in long genomic DNA sequences J. Comput. Biol. 11 2004 519 543
    • (2004) J. Comput. Biol. , vol.11 , pp. 519-543
    • Benham, C.J.1    Bi, C.2
  • 4
    • 0022461818 scopus 로고
    • A block to elongation is largely responsible for decreased transcription of c-myc in differentiated HL60 cells
    • D.L. Bentley, and M. Groudine A block to elongation is largely responsible for decreased transcription of c-myc in differentiated HL60 cells Nature 321 1986 702 706
    • (1986) Nature , vol.321 , pp. 702-706
    • Bentley, D.L.1    Groudine, M.2
  • 6
    • 55749114922 scopus 로고    scopus 로고
    • IL-4 protein expression and basal activation of Erk in vivo in follicular lymphoma
    • K.R. Calvo, B. Dabir, A. Kovach, C. Devor, R. Bandle, A. Bond, J.H. Shih, and E.S. Jaffe IL-4 protein expression and basal activation of Erk in vivo in follicular lymphoma Blood 112 2008 3818 3826
    • (2008) Blood , vol.112 , pp. 3818-3826
    • Calvo, K.R.1    Dabir, B.2    Kovach, A.3    Devor, C.4    Bandle, R.5    Bond, A.6    Shih, J.H.7    Jaffe, E.S.8
  • 8
    • 57849109058 scopus 로고    scopus 로고
    • Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
    • L.J. Core, J.J. Waterfall, and J.T. Lis Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters Science 322 2008 1845 1848
    • (2008) Science , vol.322 , pp. 1845-1848
    • Core, L.J.1    Waterfall, J.J.2    Lis, J.T.3
  • 11
    • 39049170386 scopus 로고    scopus 로고
    • Genome-wide analysis reveals regulatory role of G4 DNA in gene transcription
    • Z. Du, Y. Zhao, and N. Li Genome-wide analysis reveals regulatory role of G4 DNA in gene transcription Genome Res. 18 2008 233 241
    • (2008) Genome Res. , vol.18 , pp. 233-241
    • Du, Z.1    Zhao, Y.2    Li, N.3
  • 12
    • 0037073047 scopus 로고    scopus 로고
    • Promoter escape by RNA polymerase II
    • A. Dvir Promoter escape by RNA polymerase II Biochim. Biophys. Acta 1577 2002 208 223
    • (2002) Biochim. Biophys. Acta , vol.1577 , pp. 208-223
    • Dvir, A.1
  • 13
    • 0028590113 scopus 로고
    • Relationship of CDK-activating kinase and RNA polymerase II CTD kinase TFIIH/TFIIK
    • W.J. Feaver, J.Q. Svejstrup, N.L. Henry, and R.D. Kornberg Relationship of CDK-activating kinase and RNA polymerase II CTD kinase TFIIH/TFIIK Cell 79 1994 1103 1109
    • (1994) Cell , vol.79 , pp. 1103-1109
    • Feaver, W.J.1    Svejstrup, J.Q.2    Henry, N.L.3    Kornberg, R.D.4
  • 14
    • 29244468847 scopus 로고    scopus 로고
    • Secrets of a double agent: CDK7 in cell-cycle control and transcription
    • R.P. Fisher Secrets of a double agent: CDK7 in cell-cycle control and transcription J. Cell Sci. 118 2005 5171 5180
    • (2005) J. Cell Sci. , vol.118 , pp. 5171-5180
    • Fisher, R.P.1
  • 15
    • 70249104647 scopus 로고    scopus 로고
    • Defining mechanisms that regulate RNA polymerase II transcription in vivo
    • N.J. Fuda, M.B. Ardehali, and J.T. Lis Defining mechanisms that regulate RNA polymerase II transcription in vivo Nature 461 2009 186 192
    • (2009) Nature , vol.461 , pp. 186-192
    • Fuda, N.J.1    Ardehali, M.B.2    Lis, J.T.3
  • 17
    • 0022817308 scopus 로고
    • RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells
    • D.S. Gilmour, and J.T. Lis RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells Mol. Cell. Biol. 6 1986 3984 3989
    • (1986) Mol. Cell. Biol. , vol.6 , pp. 3984-3989
    • Gilmour, D.S.1    Lis, J.T.2
  • 18
    • 0028352861 scopus 로고
    • Transcription factors IIE and IIH and ATP hydrolysis direct promoter clearance by RNA polymerase II
    • J.A. Goodrich, and R. Tjian Transcription factors IIE and IIH and ATP hydrolysis direct promoter clearance by RNA polymerase II Cell 77 1994 145 156
    • (1994) Cell , vol.77 , pp. 145-156
    • Goodrich, J.A.1    Tjian, R.2
  • 19
    • 34447098370 scopus 로고    scopus 로고
    • A chromatin landmark and transcription initiation at most promoters in human cells
    • M.G. Guenther, S.S. Levine, L.A. Boyer, R. Jaenisch, and R.A. Young A chromatin landmark and transcription initiation at most promoters in human cells Cell 130 2007 77 88
    • (2007) Cell , vol.130 , pp. 77-88
    • Guenther, M.G.1    Levine, S.S.2    Boyer, L.A.3    Jaenisch, R.4    Young, R.A.5
  • 20
    • 0032797828 scopus 로고    scopus 로고
    • Transcription factor TFIIH is required for promoter melting in vivo
    • E. Guzmán, and J.T. Lis Transcription factor TFIIH is required for promoter melting in vivo Mol. Cell. Biol. 19 1999 5652 5658
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 5652-5658
    • Guzmán, E.1    Lis, J.T.2
  • 23
    • 0030007387 scopus 로고    scopus 로고
    • Opening of an RNA polymerase II promoter occurs in two distinct steps and requires the basal transcription factors IIE and IIH
    • F.C. Holstege, P.C. van der Vliet, and H.T. Timmers Opening of an RNA polymerase II promoter occurs in two distinct steps and requires the basal transcription factors IIE and IIH EMBO J. 15 1996 1666 1677
    • (1996) EMBO J. , vol.15 , pp. 1666-1677
    • Holstege, F.C.1    Van Der Vliet, P.C.2    Timmers, H.T.3
  • 24
    • 0031463993 scopus 로고    scopus 로고
    • Three transitions in the RNA polymerase II transcription complex during initiation
    • F.C. Holstege, U. Fiedler, and H.T. Timmers Three transitions in the RNA polymerase II transcription complex during initiation EMBO J. 16 1997 7468 7480
    • (1997) EMBO J. , vol.16 , pp. 7468-7480
    • Holstege, F.C.1    Fiedler, U.2    Timmers, H.T.3
  • 25
    • 0016423759 scopus 로고
    • DNA-dependent RNA polymerase levels during the response of human peripheral lymphocytes to phytohemagglutinin
    • J.A. Jaehning, C.C. Stewart, and R.G. Roeder DNA-dependent RNA polymerase levels during the response of human peripheral lymphocytes to phytohemagglutinin Cell 4 1975 51 57
    • (1975) Cell , vol.4 , pp. 51-57
    • Jaehning, J.A.1    Stewart, C.C.2    Roeder, R.G.3
  • 26
    • 0033004596 scopus 로고    scopus 로고
    • Disruption of the streptavidin interaction with biotinylated nucleic acid probes by 2-mercaptoethanol
    • 254
    • A. Jenne, and M. Famulok Disruption of the streptavidin interaction with biotinylated nucleic acid probes by 2-mercaptoethanol Biotechniques 26 1999 249 252 254
    • (1999) Biotechniques , vol.26 , pp. 249-252
    • Jenne, A.1    Famulok, M.2
  • 27
    • 0001074488 scopus 로고
    • Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis
    • W. Keller Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis Proc. Natl. Acad. Sci. USA 72 1975 4876 4880
    • (1975) Proc. Natl. Acad. Sci. USA , vol.72 , pp. 4876-4880
    • Keller, W.1
  • 28
    • 84860583747 scopus 로고    scopus 로고
    • Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA
    • P.P. Khil, F. Smagulova, K.M. Brick, R.D. Camerini-Otero, and G.V. Petukhova Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA Genome Res. 22 2012 957 965
    • (2012) Genome Res. , vol.22 , pp. 957-965
    • Khil, P.P.1    Smagulova, F.2    Brick, K.M.3    Camerini-Otero, R.D.4    Petukhova, G.V.5
  • 29
    • 0034717308 scopus 로고    scopus 로고
    • Mechanism of ATP-dependent promoter melting by transcription factor IIH
    • T.K. Kim, R.H. Ebright, and D. Reinberg Mechanism of ATP-dependent promoter melting by transcription factor IIH Science 288 2000 1418 1422
    • (2000) Science , vol.288 , pp. 1418-1422
    • Kim, T.K.1    Ebright, R.H.2    Reinberg, D.3
  • 32
    • 0024329991 scopus 로고
    • Induction of c-fos and c-myc expression during B cell activation by IL-4 and immunoglobulin binding ligands
    • M.J. Klemsz, L.B. Justement, E. Palmer, and J.C. Cambier Induction of c-fos and c-myc expression during B cell activation by IL-4 and immunoglobulin binding ligands J. Immunol. 143 1989 1032 1039
    • (1989) J. Immunol. , vol.143 , pp. 1032-1039
    • Klemsz, M.J.1    Justement, L.B.2    Palmer, E.3    Cambier, J.C.4
  • 33
    • 34347231949 scopus 로고    scopus 로고
    • Supercoil-driven DNA structures regulate genetic transactions
    • F. Kouzine, and D. Levens Supercoil-driven DNA structures regulate genetic transactions Front. Biosci. 12 2007 4409 4423
    • (2007) Front. Biosci. , vol.12 , pp. 4409-4423
    • Kouzine, F.1    Levens, D.2
  • 34
    • 7544242666 scopus 로고    scopus 로고
    • The dynamic response of upstream DNA to transcription-generated torsional stress
    • F. Kouzine, J. Liu, S. Sanford, H.J. Chung, and D. Levens The dynamic response of upstream DNA to transcription-generated torsional stress Nat. Struct. Mol. Biol. 11 2004 1092 1100
    • (2004) Nat. Struct. Mol. Biol. , vol.11 , pp. 1092-1100
    • Kouzine, F.1    Liu, J.2    Sanford, S.3    Chung, H.J.4    Levens, D.5
  • 35
    • 38849132828 scopus 로고    scopus 로고
    • The functional response of upstream DNA to dynamic supercoiling in vivo
    • F. Kouzine, S. Sanford, Z. Elisha-Feil, and D. Levens The functional response of upstream DNA to dynamic supercoiling in vivo Nat. Struct. Mol. Biol. 15 2008 146 154
    • (2008) Nat. Struct. Mol. Biol. , vol.15 , pp. 146-154
    • Kouzine, F.1    Sanford, S.2    Elisha-Feil, Z.3    Levens, D.4
  • 37
    • 0034507632 scopus 로고    scopus 로고
    • Transcription of eukaryotic protein-coding genes
    • T.I. Lee, and R.A. Young Transcription of eukaryotic protein-coding genes Annu. Rev. Genet. 34 2000 77 137
    • (2000) Annu. Rev. Genet. , vol.34 , pp. 77-137
    • Lee, T.I.1    Young, R.A.2
  • 41
    • 2342447166 scopus 로고    scopus 로고
    • A mutant spacer sequence between -35 and -10 elements makes the Plac promoter hyperactive and cAMP receptor protein-independent
    • M. Liu, M. Tolstorukov, V. Zhurkin, S. Garges, and S. Adhya A mutant spacer sequence between -35 and -10 elements makes the Plac promoter hyperactive and cAMP receptor protein-independent Proc. Natl. Acad. Sci. USA 101 2004 6911 6916
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 6911-6916
    • Liu, M.1    Tolstorukov, M.2    Zhurkin, V.3    Garges, S.4    Adhya, S.5
  • 43
    • 0035883859 scopus 로고    scopus 로고
    • Dissecting the functional program of Escherichia coli promoters: The combined mode of action of Lac repressor and AraC activator
    • R. Lutz, T. Lozinski, T. Ellinger, and H. Bujard Dissecting the functional program of Escherichia coli promoters: the combined mode of action of Lac repressor and AraC activator Nucleic Acids Res. 29 2001 3873 3881
    • (2001) Nucleic Acids Res. , vol.29 , pp. 3873-3881
    • Lutz, R.1    Lozinski, T.2    Ellinger, T.3    Bujard, H.4
  • 44
    • 43049152845 scopus 로고    scopus 로고
    • Poised RNA polymerase II gives pause for thought
    • T. Margaritis, and F.C. Holstege Poised RNA polymerase II gives pause for thought Cell 133 2008 581 584
    • (2008) Cell , vol.133 , pp. 581-584
    • Margaritis, T.1    Holstege, F.C.2
  • 45
    • 0021742460 scopus 로고
    • B cell activation: Three steps and their variations
    • F. Melchers, and J. Andersson B cell activation: three steps and their variations Cell 37 1984 713 720
    • (1984) Cell , vol.37 , pp. 713-720
    • Melchers, F.1    Andersson, J.2
  • 46
    • 0027101898 scopus 로고
    • Mapping of RNA polymerase on mammalian genes in cells and nuclei
    • J. Mirkovitch, and J.E. Darnell Jr. Mapping of RNA polymerase on mammalian genes in cells and nuclei Mol. Biol. Cell 3 1992 1085 1094
    • (1992) Mol. Biol. Cell , vol.3 , pp. 1085-1094
    • Mirkovitch, J.1    Darnell, Jr.J.E.2
  • 49
    • 0029163246 scopus 로고
    • Analysis of the role of TFIIE in basal transcription and TFIIH-mediated carboxy-terminal domain phosphorylation through structure-function studies of TFIIE-alpha
    • Y. Ohkuma, S. Hashimoto, C.K. Wang, M. Horikoshi, and R.G. Roeder Analysis of the role of TFIIE in basal transcription and TFIIH-mediated carboxy-terminal domain phosphorylation through structure-function studies of TFIIE-alpha Mol. Cell. Biol. 15 1995 4856 4866
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 4856-4866
    • Ohkuma, Y.1    Hashimoto, S.2    Wang, C.K.3    Horikoshi, M.4    Roeder, R.G.5
  • 50
    • 0034727102 scopus 로고    scopus 로고
    • RNA polymerase II elongation through chromatin
    • G. Orphanides, and D. Reinberg RNA polymerase II elongation through chromatin Nature 407 2000 471 475
    • (2000) Nature , vol.407 , pp. 471-475
    • Orphanides, G.1    Reinberg, D.2
  • 51
    • 0027168221 scopus 로고
    • DNA topology and a minimal set of basal factors for transcription by RNA polymerase II
    • J.D. Parvin, and P.A. Sharp DNA topology and a minimal set of basal factors for transcription by RNA polymerase II Cell 73 1993 533 540
    • (1993) Cell , vol.73 , pp. 533-540
    • Parvin, J.D.1    Sharp, P.A.2
  • 52
    • 0013900616 scopus 로고
    • RNA synthesis and histone acetylation during the course of gene activation in lymphocytes
    • B.G. Pogo, V.G. Allfrey, and A.E. Mirsky RNA synthesis and histone acetylation during the course of gene activation in lymphocytes Proc. Natl. Acad. Sci. USA 55 1966 805 812
    • (1966) Proc. Natl. Acad. Sci. USA , vol.55 , pp. 805-812
    • Pogo, B.G.1    Allfrey, V.G.2    Mirsky, A.E.3
  • 53
    • 0014152088 scopus 로고
    • The effect of phytohemagglutinin on ribonucleic acid synthesis and histone acetylation in equine leukocytes
    • B.G. Pogo, V.G. Allfrey, and A.E. Mirsky The effect of phytohemagglutinin on ribonucleic acid synthesis and histone acetylation in equine leukocytes J. Cell Biol. 35 1967 477 482
    • (1967) J. Cell Biol. , vol.35 , pp. 477-482
    • Pogo, B.G.1    Allfrey, V.G.2    Mirsky, A.E.3
  • 54
    • 0030960672 scopus 로고    scopus 로고
    • Transcriptional activation by recruitment
    • M. Ptashne, and A. Gann Transcriptional activation by recruitment Nature 386 1997 569 577
    • (1997) Nature , vol.386 , pp. 569-577
    • Ptashne, M.1    Gann, A.2
  • 55
    • 17044399754 scopus 로고    scopus 로고
    • Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit
    • M. Radonjic, J.C. Andrau, P. Lijnzaad, P. Kemmeren, T.T. Kockelkorn, D. van Leenen, N.L. van Berkum, and F.C. Holstege Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit Mol. Cell 18 2005 171 183
    • (2005) Mol. Cell , vol.18 , pp. 171-183
    • Radonjic, M.1    Andrau, J.C.2    Lijnzaad, P.3    Kemmeren, P.4    Kockelkorn, T.T.5    Van Leenen, D.6    Van Berkum, N.L.7    Holstege, F.C.8
  • 56
    • 33646359685 scopus 로고    scopus 로고
    • DNA structures at chromosomal translocation sites
    • S.C. Raghavan, and M.R. Lieber DNA structures at chromosomal translocation sites Bioessays 28 2006 480 494
    • (2006) Bioessays , vol.28 , pp. 480-494
    • Raghavan, S.C.1    Lieber, M.R.2
  • 58
    • 0030006070 scopus 로고    scopus 로고
    • Clonal selection and learning in the antibody system
    • K. Rajewsky Clonal selection and learning in the antibody system Nature 381 1996 751 758
    • (1996) Nature , vol.381 , pp. 751-758
    • Rajewsky, K.1
  • 59
    • 78751605211 scopus 로고    scopus 로고
    • Chromatin condensation via the condensin II complex is required for peripheral T-cell quiescence
    • J.S. Rawlings, M. Gatzka, P.G. Thomas, and J.N. Ihle Chromatin condensation via the condensin II complex is required for peripheral T-cell quiescence EMBO J. 30 2011 263 276
    • (2011) EMBO J. , vol.30 , pp. 263-276
    • Rawlings, J.S.1    Gatzka, M.2    Thomas, P.G.3    Ihle, J.N.4
  • 60
    • 14544280757 scopus 로고    scopus 로고
    • Transcriptional regulation and the role of diverse coactivators in animal cells
    • R.G. Roeder Transcriptional regulation and the role of diverse coactivators in animal cells FEBS Lett. 579 2005 909 915
    • (2005) FEBS Lett. , vol.579 , pp. 909-915
    • Roeder, R.G.1
  • 61
    • 0025062563 scopus 로고
    • Reversible G1 arrest in the cell cycle of human lymphoid cell lines by dimethyl sulfoxide
    • M. Sawai, K. Takase, H. Teraoka, and K. Tsukada Reversible G1 arrest in the cell cycle of human lymphoid cell lines by dimethyl sulfoxide Exp. Cell Res. 187 1990 4 10
    • (1990) Exp. Cell Res. , vol.187 , pp. 4-10
    • Sawai, M.1    Takase, K.2    Teraoka, H.3    Tsukada, K.4
  • 62
    • 69249215400 scopus 로고    scopus 로고
    • Divergent transcription: A new feature of active promoters
    • A.C. Seila, L.J. Core, J.T. Lis, and P.A. Sharp Divergent transcription: a new feature of active promoters Cell Cycle 8 2009 2557 2564
    • (2009) Cell Cycle , vol.8 , pp. 2557-2564
    • Seila, A.C.1    Core, L.J.2    Lis, J.T.3    Sharp, P.A.4
  • 63
  • 64
    • 77952306633 scopus 로고    scopus 로고
    • Quadruplex structures of muscle gene promoter sequences enhance in vivo MyoD-dependent gene expression
    • J. Shklover, P. Weisman-Shomer, A. Yafe, and M. Fry Quadruplex structures of muscle gene promoter sequences enhance in vivo MyoD-dependent gene expression Nucleic Acids Res. 38 2010 2369 2377
    • (2010) Nucleic Acids Res. , vol.38 , pp. 2369-2377
    • Shklover, J.1    Weisman-Shomer, P.2    Yafe, A.3    Fry, M.4
  • 65
    • 0027275945 scopus 로고
    • Lifespans of naive, memory and effector lymphocytes
    • J. Sprent Lifespans of naive, memory and effector lymphocytes Curr. Opin. Immunol. 5 1993 433 438
    • (1993) Curr. Opin. Immunol. , vol.5 , pp. 433-438
    • Sprent, J.1
  • 66
    • 0029091310 scopus 로고
    • The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex
    • D.E. Sterner, J.M. Lee, S.E. Hardin, and A.L. Greenleaf The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex Mol. Cell. Biol. 15 1995 5716 5724
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 5716-5724
    • Sterner, D.E.1    Lee, J.M.2    Hardin, S.E.3    Greenleaf, A.L.4
  • 67
    • 0018961145 scopus 로고
    • 3′-end labeling of DNA with [alpha-32P]cordycepin-5′- triphosphate
    • C.P. Tu, and S.N. Cohen 3′-end labeling of DNA with [alpha-32P]cordycepin-5′-triphosphate Gene 10 1980 177 183
    • (1980) Gene , vol.10 , pp. 177-183
    • Tu, C.P.1    Cohen, S.N.2
  • 71
    • 47249119315 scopus 로고    scopus 로고
    • Differential binding of quadruplex structures of muscle-specific genes regulatory sequences by MyoD, MRF4 and myogenin
    • A. Yafe, J. Shklover, P. Weisman-Shomer, E. Bengal, and M. Fry Differential binding of quadruplex structures of muscle-specific genes regulatory sequences by MyoD, MRF4 and myogenin Nucleic Acids Res. 36 2008 3916 3925
    • (2008) Nucleic Acids Res. , vol.36 , pp. 3916-3925
    • Yafe, A.1    Shklover, J.2    Weisman-Shomer, P.3    Bengal, E.4    Fry, M.5
  • 75
    • 84876004639 scopus 로고    scopus 로고
    • Mapping genomic hotspots of DNA damage by a single-strand-DNA-compatible and strand-specific ChIP-seq method
    • Z.-X. Zhou, M.-J. Zhang, X. Peng, Y. Takayama, X.-Y. Xu, L.-Z. Huang, and L.-L. Du Mapping genomic hotspots of DNA damage by a single-strand-DNA- compatible and strand-specific ChIP-seq method Genome Res. 23 2013 705 715
    • (2013) Genome Res. , vol.23 , pp. 705-715
    • Zhou, Z.-X.1    Zhang, M.-J.2    Peng, X.3    Takayama, Y.4    Xu, X.-Y.5    Huang, L.-Z.6    Du, L.-L.7
  • 77
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • B. Langmead, C. Trapnell, M. Pop, and S.L. Salzberg Ultrafast and memory-efficient alignment of short DNA sequences to the human genome Genome Biol. 10 2009 R25
    • (2009) Genome Biol. , vol.10 , pp. 25
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 78
    • 0025333058 scopus 로고
    • Small-scale preparation of extracts from radiolabeled cells efficient in pre-mRNA splicing
    • K.A. Lee, and M.R. Green Small-scale preparation of extracts from radiolabeled cells efficient in pre-mRNA splicing Methods Enzymol. 181 1990 20 30
    • (1990) Methods Enzymol. , vol.181 , pp. 20-30
    • Lee, K.A.1    Green, M.R.2
  • 80
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • C. Trapnell, L. Pachter, and S.L. Salzberg TopHat: discovering splice junctions with RNA-Seq Bioinformatics 25 2009 1105 1111
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 82
    • 67650711619 scopus 로고    scopus 로고
    • A clustering approach for identification of enriched domains from histone modification ChIP-Seq data
    • C. Zang, D.E. Schones, C. Zeng, K. Cui, K. Zhao, and W. Peng A clustering approach for identification of enriched domains from histone modification ChIP-Seq data Bioinformatics 25 2009 1952 1958
    • (2009) Bioinformatics , vol.25 , pp. 1952-1958
    • Zang, C.1    Schones, D.E.2    Zeng, C.3    Cui, K.4    Zhao, K.5    Peng, W.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.