메뉴 건너뛰기




Volumn 40, Issue 5, 2013, Pages 205-210

Epigenetic Variations in Plant Hybrids and Their Potential Roles in Heterosis

Author keywords

[No Author keywords available]

Indexed keywords

CIS ACTING ELEMENT; CYTOSINE; DICER; DNA METHYLTRANSFERASE; LATE ELONGATED HYPOCOTYL; PLANT DNA; SMALL INTERFERING RNA; TRANS ACTING FACTOR; TRANSCRIPTION FACTOR CLOCK; UNCLASSIFIED DRUG;

EID: 84878120893     PISSN: 16738527     EISSN: 18735533     Source Type: Journal    
DOI: 10.1016/j.jgg.2013.03.011     Document Type: Article
Times cited : (41)

References (53)
  • 2
    • 75849126549 scopus 로고    scopus 로고
    • Intraspecific hybrids of Arabidopsis thaliana revealed no gross alterations in endopolyploidy, DNA methylation, histone modifications and transcript levels
    • Banaei Moghaddam A.M., Fuchs J., Czauderna T., Houben A., Mette M.F. Intraspecific hybrids of Arabidopsis thaliana revealed no gross alterations in endopolyploidy, DNA methylation, histone modifications and transcript levels. Theor. Appl. Genet. 2010, 120:215-226.
    • (2010) Theor. Appl. Genet. , vol.120 , pp. 215-226
    • Banaei Moghaddam, A.M.1    Fuchs, J.2    Czauderna, T.3    Houben, A.4    Mette, M.F.5
  • 5
    • 34249299791 scopus 로고    scopus 로고
    • The complex language of chromatin regulation during transcription
    • Berger S.L. The complex language of chromatin regulation during transcription. Nature 2007, 447:407-412.
    • (2007) Nature , vol.447 , pp. 407-412
    • Berger, S.L.1
  • 6
    • 0142060823 scopus 로고    scopus 로고
    • In search of the molecular basis of heterosis
    • Birchler J.A., Auger D.L., Riddle N.C. In search of the molecular basis of heterosis. Plant Cell 2003, 15:2236-2239.
    • (2003) Plant Cell , vol.15 , pp. 2236-2239
    • Birchler, J.A.1    Auger, D.L.2    Riddle, N.C.3
  • 7
    • 37049192065 scopus 로고
    • The mendelian theory of heredity and the augmentation of vigor
    • Bruce A.B. The mendelian theory of heredity and the augmentation of vigor. Science 1910, 32:627-628.
    • (1910) Science , vol.32 , pp. 627-628
    • Bruce, A.B.1
  • 8
    • 17744364327 scopus 로고    scopus 로고
    • Gardening the genome: DNA methylation in Arabidopsis thaliana
    • Chan S.W., Henderson I.R., Jacobsen S.E. Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat. Rev. Genet. 2005, 6:351-360.
    • (2005) Nat. Rev. Genet. , vol.6 , pp. 351-360
    • Chan, S.W.1    Henderson, I.R.2    Jacobsen, S.E.3
  • 9
    • 77958602989 scopus 로고    scopus 로고
    • Expression analysis of miRNAs and highly-expressed small RNAs in two rice subspecies and their reciprocal hybrids
    • Chen F., He G., He H., Chen W., Zhu X., Liang M., Chen L., Deng X.W. Expression analysis of miRNAs and highly-expressed small RNAs in two rice subspecies and their reciprocal hybrids. J. Integr. Plant Biol. 2010, 52:971-980.
    • (2010) J. Integr. Plant Biol. , vol.52 , pp. 971-980
    • Chen, F.1    He, G.2    He, H.3    Chen, W.4    Zhu, X.5    Liang, M.6    Chen, L.7    Deng, X.W.8
  • 10
    • 70350227275 scopus 로고    scopus 로고
    • Small RNAs and their roles in plant development
    • Chen X. Small RNAs and their roles in plant development. Annu. Rev. Cell Dev. Biol. 2009, 25:21-44.
    • (2009) Annu. Rev. Cell Dev. Biol. , vol.25 , pp. 21-44
    • Chen, X.1
  • 12
    • 0001412302 scopus 로고
    • Degeneration, albinism and inbreeding
    • Davenport C.B. Degeneration, albinism and inbreeding. Science 1908, 28:454-455.
    • (1908) Science , vol.28 , pp. 454-455
    • Davenport, C.B.1
  • 13
    • 84863005563 scopus 로고    scopus 로고
    • MicroRNA transcriptomic analysis of heterosis during maize seed germination
    • Ding D., Wang Y., Han M., Fu Z., Li W., Liu Z., Hu Y., Tang J. MicroRNA transcriptomic analysis of heterosis during maize seed germination. PLoS ONE 2012, 7:e39578.
    • (2012) PLoS ONE , vol.7
    • Ding, D.1    Wang, Y.2    Han, M.3    Fu, Z.4    Li, W.5    Liu, Z.6    Hu, Y.7    Tang, J.8
  • 21
    • 34249330696 scopus 로고    scopus 로고
    • Epigenetic inheritance in plants
    • Henderson I.R., Jacobsen S.E. Epigenetic inheritance in plants. Nature 2007, 447:418-424.
    • (2007) Nature , vol.447 , pp. 418-424
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 22
    • 34548395815 scopus 로고    scopus 로고
    • Towards the molecular basis of heterosis
    • Hochholdinger F., Hoecker N. Towards the molecular basis of heterosis. Trends Plant Sci. 2007, 12:427-432.
    • (2007) Trends Plant Sci. , vol.12 , pp. 427-432
    • Hochholdinger, F.1    Hoecker, N.2
  • 23
    • 55149086560 scopus 로고    scopus 로고
    • Alterations in cytosine methylation and species-specific transcription induced by interspecific hybridization between Oryza sativa and O. officinalis
    • Jin H., Hu W., Wei Z., Wan L., Li G., Tan G., Zhu L., He G. Alterations in cytosine methylation and species-specific transcription induced by interspecific hybridization between Oryza sativa and O. officinalis. Theor. Appl. Genet. 2008, 117:1271-1279.
    • (2008) Theor. Appl. Genet. , vol.117 , pp. 1271-1279
    • Jin, H.1    Hu, W.2    Wei, Z.3    Wan, L.4    Li, G.5    Tan, G.6    Zhu, L.7    He, G.8
  • 24
    • 0001136614 scopus 로고
    • Dominance of linked factors as a means of accounting for heterosis
    • Jones D.F. Dominance of linked factors as a means of accounting for heterosis. Genetics 1917, 2:466-479.
    • (1917) Genetics , vol.2 , pp. 466-479
    • Jones, D.F.1
  • 25
    • 0002791516 scopus 로고
    • The mode of inheritance of stature and of time of flowering in peas (Pisum sativum)
    • Keeble F., Pellew C. The mode of inheritance of stature and of time of flowering in peas (Pisum sativum). J. Genet. 1910, 1:47-56.
    • (1910) J. Genet. , vol.1 , pp. 47-56
    • Keeble, F.1    Pellew, C.2
  • 27
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • Kouzarides T. Chromatin modifications and their function. Cell 2007, 128:693-705.
    • (2007) Cell , vol.128 , pp. 693-705
    • Kouzarides, T.1
  • 28
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law J.A., Jacobsen S.E. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat. Rev. Genet. 2010, 11:204-220.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 29
    • 33847070442 scopus 로고    scopus 로고
    • The role of chromatin during transcription
    • Li B., Carey M., Workman J.L. The role of chromatin during transcription. Cell 2007, 128:707-719.
    • (2007) Cell , vol.128 , pp. 707-719
    • Li, B.1    Carey, M.2    Workman, J.L.3
  • 30
    • 79960078099 scopus 로고    scopus 로고
    • Altered levels of histone deacetylase OsHDT1 affect differential gene expression patterns in hybrid rice
    • Li C., Huang L., Xu C., Zhao Y., Zhou D.X. Altered levels of histone deacetylase OsHDT1 affect differential gene expression patterns in hybrid rice. PLoS ONE 2011, 6:e21789.
    • (2011) PLoS ONE , vol.6
    • Li, C.1    Huang, L.2    Xu, C.3    Zhao, Y.4    Zhou, D.X.5
  • 31
    • 42549090878 scopus 로고    scopus 로고
    • High-resolution mapping of epigenetic modifications of the rice genome uncovers interplay between DNA methylation, histone methylation, and gene expression
    • Li X., Wang X., He K., Ma Y., Su N., He H., Stolc V., Tongprasit W., Jin W., Jiang J., Terzaghi W., Li S., Deng X.W. High-resolution mapping of epigenetic modifications of the rice genome uncovers interplay between DNA methylation, histone methylation, and gene expression. Plant Cell 2008, 20:259-276.
    • (2008) Plant Cell , vol.20 , pp. 259-276
    • Li, X.1    Wang, X.2    He, K.3    Ma, Y.4    Su, N.5    He, H.6    Stolc, V.7    Tongprasit, W.8    Jin, W.9    Jiang, J.10    Terzaghi, W.11    Li, S.12    Deng, X.W.13
  • 32
    • 84868279963 scopus 로고    scopus 로고
    • The inheritance pattern of 24 nt siRNA clusters in arabidopsis hybrids is influenced by proximity to transposable elements
    • Li Y., Varala K., Moose S.P., Hudson M.E. The inheritance pattern of 24 nt siRNA clusters in arabidopsis hybrids is influenced by proximity to transposable elements. PLoS ONE 2012, 7:e47043.
    • (2012) PLoS ONE , vol.7
    • Li, Y.1    Varala, K.2    Moose, S.P.3    Hudson, M.E.4
  • 34
    • 58249105076 scopus 로고    scopus 로고
    • Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids
    • Ni Z., Kim E.D., Ha M., Lackey E., Liu J., Zhang Y., Sun Q., Chen Z.J. Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids. Nature 2009, 457:327-331.
    • (2009) Nature , vol.457 , pp. 327-331
    • Ni, Z.1    Kim, E.D.2    Ha, M.3    Lackey, E.4    Liu, J.5    Zhang, Y.6    Sun, Q.7    Chen, Z.J.8
  • 36
    • 34548417381 scopus 로고
    • An expansion of Jones's theory for the explanation of heterosis
    • Powers L. An expansion of Jones's theory for the explanation of heterosis. Am. Nat. 1944, 78:275-280.
    • (1944) Am. Nat. , vol.78 , pp. 275-280
    • Powers, L.1
  • 38
    • 33646193822 scopus 로고    scopus 로고
    • Inherited epigenetic variation-revisiting soft inheritance
    • Richards E.J. Inherited epigenetic variation-revisiting soft inheritance. Nat. Rev. Genet. 2006, 7:395-401.
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 395-401
    • Richards, E.J.1
  • 39
    • 34547890019 scopus 로고    scopus 로고
    • Functions of site-specific histone acetylation and deacetylation
    • Shahbazian M.D., Grunstein M. Functions of site-specific histone acetylation and deacetylation. Annu. Rev. Biochem. 2007, 76:75-100.
    • (2007) Annu. Rev. Biochem. , vol.76 , pp. 75-100
    • Shahbazian, M.D.1    Grunstein, M.2
  • 40
    • 84860109530 scopus 로고    scopus 로고
    • Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsis ecotypes and their reciprocal hybrids
    • Shen H., He H., Li J., Chen W., Wang X., Guo L., Peng Z., He G., Zhong S., Qi Y., Terzaghi W., Deng X.W. Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsis ecotypes and their reciprocal hybrids. Plant Cell 2012, 24:875-892.
    • (2012) Plant Cell , vol.24 , pp. 875-892
    • Shen, H.1    He, H.2    Li, J.3    Chen, W.4    Wang, X.5    Guo, L.6    Peng, Z.7    He, G.8    Zhong, S.9    Qi, Y.10    Terzaghi, W.11    Deng, X.W.12
  • 41
    • 84960602046 scopus 로고
    • The composition of a field of maize
    • OS-4
    • Shull G.H. The composition of a field of maize. J. Hered. 1908, os-4:296-301.
    • (1908) J. Hered. , pp. 296-301
    • Shull, G.H.1
  • 43
    • 33847701258 scopus 로고    scopus 로고
    • Allelic variation and heterosis in maize: how do two halves make more than a whole?
    • Springer N.M., Stupar R.M. Allelic variation and heterosis in maize: how do two halves make more than a whole?. Genome Res. 2007, 17:264-275.
    • (2007) Genome Res. , vol.17 , pp. 264-275
    • Springer, N.M.1    Stupar, R.M.2
  • 45
    • 66149176899 scopus 로고    scopus 로고
    • Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize
    • Wang X., Elling A.A., Li X., Li N., Peng Z., He G., Sun H., Qi Y., Liu X.S., Deng X.W. Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize. Plant Cell 2009, 21:1053-1069.
    • (2009) Plant Cell , vol.21 , pp. 1053-1069
    • Wang, X.1    Elling, A.A.2    Li, X.3    Li, N.4    Peng, Z.5    He, G.6    Sun, H.7    Qi, Y.8    Liu, X.S.9    Deng, X.W.10
  • 48
    • 66049146171 scopus 로고    scopus 로고
    • A genome-wide transcription analysis reveals a close correlation of promoter INDEL polymorphism and heterotic gene expression in rice hybrids
    • Zhang H.Y., He H., Chen L.B., Li L., Liang M.Z., Wang X.F., Liu X.G., He G.M., Chen R.S., Ma L.G., Deng X.W. A genome-wide transcription analysis reveals a close correlation of promoter INDEL polymorphism and heterotic gene expression in rice hybrids. Mol. Plant 2008, 1:720-731.
    • (2008) Mol. Plant , vol.1 , pp. 720-731
    • Zhang, H.Y.1    He, H.2    Chen, L.B.3    Li, L.4    Liang, M.Z.5    Wang, X.F.6    Liu, X.G.7    He, G.M.8    Chen, R.S.9    Ma, L.G.10    Deng, X.W.11
  • 50
    • 42549085238 scopus 로고    scopus 로고
    • The epigenetic landscape of plants
    • Zhang X. The epigenetic landscape of plants. Science 2008, 320:489-492.
    • (2008) Science , vol.320 , pp. 489-492
    • Zhang, X.1
  • 51
    • 34047168659 scopus 로고    scopus 로고
    • Epigenetic inheritance and variation of DNA methylation level and pattern in maize intra-specific hybrids
    • Zhao X., Chai Y., Liu B. Epigenetic inheritance and variation of DNA methylation level and pattern in maize intra-specific hybrids. Plant Sci. 2007, 172:930-938.
    • (2007) Plant Sci. , vol.172 , pp. 930-938
    • Zhao, X.1    Chai, Y.2    Liu, B.3
  • 52
    • 73349104113 scopus 로고    scopus 로고
    • Active DNA demethylation mediated by DNA glycosylases
    • Zhu J.K. Active DNA demethylation mediated by DNA glycosylases. Annu. Rev. Genet. 2009, 43:143-166.
    • (2009) Annu. Rev. Genet. , vol.43 , pp. 143-166
    • Zhu, J.K.1
  • 53
    • 33845880624 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
    • Zilberman D., Gehring M., Tran R.K., Ballinger T., Henikoff S. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nat. Genet. 2007, 39:61-69.
    • (2007) Nat. Genet. , vol.39 , pp. 61-69
    • Zilberman, D.1    Gehring, M.2    Tran, R.K.3    Ballinger, T.4    Henikoff, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.