Orthology Guided Assembly in highly heterozygous crops: Creating a reference transcriptome to uncover genetic diversity in Lolium perenne

Plant Biotechnology Journal

Volumn 11, Issue 5, 2013, Pages 605-617

  Ruttink, Tom ^a   Sterck, Lieven ^b,c   Rohde, Antje ^a,d   Bendixen, Christian ^e   Rouzé, Pierre ^b,c   Asp, Torben ^f   Van de Peer, Yves ^b,c   Roldan Ruiz, Isabel ^a  

^a INSTITUTE FOR AGRICULTURAL AND FISHERIES RESEARCH ILVO   (Belgium)

^b DEPARTMENT OF PLANT SYSTEMS BIOLOGY   (Belgium)

^c GHENT UNIVERSITY   (Belgium)

^d Bayer Cropscience Belgium   (Belgium)

^e AARHUS UNIVERSITY   (Denmark)

^f AARHUS UNIVERSITY   (Denmark)

Author keywords

Crops; de novo transcriptome assembly; Genetic diversity; Heterozygosity; Lolium perenne; SNP

Indexed keywords

TRANSCRIPTOME;

ARTICLE; BIOLOGY; CROP; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENETIC VARIABILITY; GENETICS; HETEROZYGOTE; LOLIUM; METHODOLOGY; OPEN READING FRAME; PHYLOGENY; SINGLE NUCLEOTIDE POLYMORPHISM; STANDARD;

COMPUTATIONAL BIOLOGY; CROPS, AGRICULTURAL; GENE EXPRESSION REGULATION, PLANT; GENETIC VARIATION; HETEROZYGOTE; LOLIUM; OPEN READING FRAMES; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE; REFERENCE STANDARDS; SEQUENCE ANALYSIS, DNA; TRANSCRIPTOME;

LOLIUM PERENNE;

EID: 84878015090     PISSN: 14677644     EISSN: 14677652     Source Type: Journal    
DOI: 10.1111/pbi.12051     Document Type: Article

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