메뉴 건너뛰기




Volumn 67, Issue 2, 2013, Pages 367-378

Intricate patterns of phylogenetic relationships in the olive family as inferred from multi-locus plastid and nuclear DNA sequence analyses: A close-up on Chionanthus and Noronhia (Oleaceae)

Author keywords

Cenozoic dispersal; Chionanthus; Madagascar; Noronhia; Phylogeny; Taxonomy

Indexed keywords

NUCLEAR PROTEIN;

EID: 84877929786     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2013.02.003     Document Type: Article
Times cited : (40)

References (100)
  • 2
    • 76249088920 scopus 로고    scopus 로고
    • Mammalian biodiversity on Madagascar controlled by ocean currents
    • Ali J.R., Huber M. Mammalian biodiversity on Madagascar controlled by ocean currents. Nature 2010, 463:653-657.
    • (2010) Nature , vol.463 , pp. 653-657
    • Ali, J.R.1    Huber, M.2
  • 3
    • 0344613211 scopus 로고    scopus 로고
    • Ribosomal ITS sequences and plant phylogenetic inference
    • álvarez I., Wendel J.F. Ribosomal ITS sequences and plant phylogenetic inference. Mol. Phylogenet. Evol. 2003, 29:417-434.
    • (2003) Mol. Phylogenet. Evol. , vol.29 , pp. 417-434
    • Álvarez, I.1    Wendel, J.F.2
  • 4
    • 84877930260 scopus 로고    scopus 로고
    • Day-time feeding ecology of Eulemur cinereiceps in the Agnalazaha forest, Mahabo-Mananivo, Madagascar
    • Andriamaharoa H., Birkinshaw C.R., Ludovic R. Day-time feeding ecology of Eulemur cinereiceps in the Agnalazaha forest, Mahabo-Mananivo, Madagascar. Madag. Conserv. Dev. 2010, 5:55-63.
    • (2010) Madag. Conserv. Dev. , vol.5 , pp. 55-63
    • Andriamaharoa, H.1    Birkinshaw, C.R.2    Ludovic, R.3
  • 6
    • 0036086958 scopus 로고    scopus 로고
    • Phylogenetic relationships among Olea species, based on nucleotide variation at a non-coding chloroplast DNA region
    • Baldoni L., Guerrero C., Sossey-Alaoui K., Abbott A.G., Angiolillo A., Lumaret R. Phylogenetic relationships among Olea species, based on nucleotide variation at a non-coding chloroplast DNA region. Plant Biol. 2002, 4:346-351.
    • (2002) Plant Biol. , vol.4 , pp. 346-351
    • Baldoni, L.1    Guerrero, C.2    Sossey-Alaoui, K.3    Abbott, A.G.4    Angiolillo, A.5    Lumaret, R.6
  • 7
    • 0036699888 scopus 로고    scopus 로고
    • The utility of the incongruence length difference test
    • Barker F.K., Lutzoni F.M. The utility of the incongruence length difference test. Syst. Biol. 2002, 51:625-637.
    • (2002) Syst. Biol. , vol.51 , pp. 625-637
    • Barker, F.K.1    Lutzoni, F.M.2
  • 8
    • 0032099630 scopus 로고    scopus 로고
    • Biogeography and floral evolution of baobabs (Adansonia, Bombacaceae) as inferred from multiple data sets
    • Baum D.A., Small R.A., Wendel J.F. Biogeography and floral evolution of baobabs (Adansonia, Bombacaceae) as inferred from multiple data sets. Syst. Biol. 1998, 47:181-207.
    • (1998) Syst. Biol. , vol.47 , pp. 181-207
    • Baum, D.A.1    Small, R.A.2    Wendel, J.F.3
  • 9
    • 37249092922 scopus 로고    scopus 로고
    • Polyploidy in the olive complex (Olea europaea): evidence from flow cytometry and nuclear microsatellites analyses
    • Besnard G., García-Verdugo C., Rubio de Casas R., Treier U.A., Galland N., Vargas P. Polyploidy in the olive complex (Olea europaea): evidence from flow cytometry and nuclear microsatellites analyses. Ann. Bot. 2008, 101:25-30.
    • (2008) Ann. Bot. , vol.101 , pp. 25-30
    • Besnard, G.1    García-Verdugo, C.2    Rubio de Casas, R.3    Treier, U.A.4    Galland, N.5    Vargas, P.6
  • 10
    • 69149105958 scopus 로고    scopus 로고
    • Phylogenetics of Olea (Oleaceae) based on plastid and nuclear ribosomal DNA sequences: tertiary climatic shifts and lineage differentiation times
    • Besnard G., Rubio de Casas R., Christin P.-A., Vargas P. Phylogenetics of Olea (Oleaceae) based on plastid and nuclear ribosomal DNA sequences: tertiary climatic shifts and lineage differentiation times. Ann. Bot. 2009, 104:143-160.
    • (2009) Ann. Bot. , vol.104 , pp. 143-160
    • Besnard, G.1    Rubio de Casas, R.2    Christin, P.-A.3    Vargas, P.4
  • 12
    • 0000311729 scopus 로고    scopus 로고
    • The importance of the black lemur (Eulemur macaco) for seed dispersal in Lokobe forest, Nosy Be
    • Kluwer Academic, New York, B. Rakotosaminana, H. Rasamimanana, J.U. Ganzhorn, S.M. Goodman (Eds.)
    • Birkinshaw C.R. The importance of the black lemur (Eulemur macaco) for seed dispersal in Lokobe forest, Nosy Be. New Directions in Lemur Studies 1999, 189-199. Kluwer Academic, New York. B. Rakotosaminana, H. Rasamimanana, J.U. Ganzhorn, S.M. Goodman (Eds.).
    • (1999) New Directions in Lemur Studies , pp. 189-199
    • Birkinshaw, C.R.1
  • 13
    • 0035730999 scopus 로고    scopus 로고
    • Fruit characteristics of species dispersed by the black lemur (Eulemur macaco) in the Lokobe forest, Madagascar
    • Birkinshaw C.R. Fruit characteristics of species dispersed by the black lemur (Eulemur macaco) in the Lokobe forest, Madagascar. Biotropica 2001, 33:478-486.
    • (2001) Biotropica , vol.33 , pp. 478-486
    • Birkinshaw, C.R.1
  • 14
    • 67949111069 scopus 로고    scopus 로고
    • Molecular phylogenetic analyses of nuclear and plastid DNA sequences support dysploid and polyploid chromosome number changes and reticulate evolution in the diversification of Melampodium (Milleriieae, Asteraceae)
    • Blöch C., Weiss-Schneeweiss H., Schneeweiss G.M., Barfuss M.H.J., Rebernig C.A., Villaseñor J.L., Stuessy T.F. Molecular phylogenetic analyses of nuclear and plastid DNA sequences support dysploid and polyploid chromosome number changes and reticulate evolution in the diversification of Melampodium (Milleriieae, Asteraceae). Mol. Phylogenet. Evol. 2009, 53:220-233.
    • (2009) Mol. Phylogenet. Evol. , vol.53 , pp. 220-233
    • Blöch, C.1    Weiss-Schneeweiss, H.2    Schneeweiss, G.M.3    Barfuss, M.H.J.4    Rebernig, C.A.5    Villaseñor, J.L.6    Stuessy, T.F.7
  • 15
    • 33645092742 scopus 로고
    • Deux nouvelles espèces de Noronhia Stadm. ex Thouars (Oleaceae) de Madagascar
    • Bosser J. Deux nouvelles espèces de Noronhia Stadm. ex Thouars (Oleaceae) de Madagascar. Adansonia 1973, 13:461-466.
    • (1973) Adansonia , vol.13 , pp. 461-466
    • Bosser, J.1
  • 16
    • 79955409280 scopus 로고    scopus 로고
    • Challenges in polyploid phylogenetic reconstruction: a case story from the arctic-alpine Cerastium alpinum complex
    • Brysting A.K., Mathiesen C., Marcussen T. Challenges in polyploid phylogenetic reconstruction: a case story from the arctic-alpine Cerastium alpinum complex. Taxon 2011, 60:333-347.
    • (2011) Taxon , vol.60 , pp. 333-347
    • Brysting, A.K.1    Mathiesen, C.2    Marcussen, T.3
  • 17
    • 0027040270 scopus 로고
    • Investigations of angiosperms from the Eocene of southeastern North America: samaras of Fraxinus wilcoxiana Berry
    • Call V.B., Dilcher D.L. Investigations of angiosperms from the Eocene of southeastern North America: samaras of Fraxinus wilcoxiana Berry. Rev. Palaeobot. Palynol. 1992, 74:249-266.
    • (1992) Rev. Palaeobot. Palynol. , vol.74 , pp. 249-266
    • Call, V.B.1    Dilcher, D.L.2
  • 19
    • 0036221248 scopus 로고    scopus 로고
    • When does the incongruence length difference test fail?
    • Darlu P., Lecointre G. When does the incongruence length difference test fail?. Mol. Biol. Evol. 2002, 19:432-437.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 432-437
    • Darlu, P.1    Lecointre, G.2
  • 20
    • 65649131928 scopus 로고    scopus 로고
    • Gene tree discordance, phylogenetic inference and the multispecies coalescent
    • Degnan J.H., Rosenberg N.A. Gene tree discordance, phylogenetic inference and the multispecies coalescent. Trends Ecol. Evol. 2009, 24:332-340.
    • (2009) Trends Ecol. Evol. , vol.24 , pp. 332-340
    • Degnan, J.H.1    Rosenberg, N.A.2
  • 21
    • 0002196344 scopus 로고    scopus 로고
    • Cathemeral activity of red-fronted brown lemurs (Eulemur fulvus rufus) in the Kirindy forest/CFPF
    • Kluwer Academic, New York, B. Rakotosaminana, H. Rasamimanana, J.U. Ganzhorn, S.M. Goodman (Eds.)
    • Donati G., Lunardini A., Kappeler P.M. Cathemeral activity of red-fronted brown lemurs (Eulemur fulvus rufus) in the Kirindy forest/CFPF. New Directions in Lemur Studies 1999, 119-137. Kluwer Academic, New York. B. Rakotosaminana, H. Rasamimanana, J.U. Ganzhorn, S.M. Goodman (Eds.).
    • (1999) New Directions in Lemur Studies , pp. 119-137
    • Donati, G.1    Lunardini, A.2    Kappeler, P.M.3
  • 22
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214.
    • (2007) BMC Evol. Biol. , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 24
    • 84877929477 scopus 로고
    • Genera Nova Madagascariensia, Paris.
    • Du Petit-Thouars, L.-M.A.A., 1806. Genera Nova Madagascariensia, Paris.
    • (1806)
    • Du Petit-Thouars, L.-M.A.A.1
  • 25
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 2004, 32:1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 26
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using Phred I. Accuracy assessment
    • Ewing B., Hillier L., Wendl M., Green P. Base-calling of automated sequencer traces using Phred I. Accuracy assessment. Genome Res. 1998, 8:175-185.
    • (1998) Genome Res. , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.3    Green, P.4
  • 28
    • 70349487868 scopus 로고    scopus 로고
    • Hybrid origins and homoploid reticulate evolution within Heliosperma (Sileneae, Caryophyllaceae) - a multigene phylogenetic approach with relative dating
    • Frajman B., Eggens F., Oxelman B. Hybrid origins and homoploid reticulate evolution within Heliosperma (Sileneae, Caryophyllaceae) - a multigene phylogenetic approach with relative dating. Syst. Biol. 2009, 58:328-345.
    • (2009) Syst. Biol. , vol.58 , pp. 328-345
    • Frajman, B.1    Eggens, F.2    Oxelman, B.3
  • 29
    • 0036284979 scopus 로고    scopus 로고
    • A revision of Olea L. (Oleaceae)
    • Green P.S. A revision of Olea L. (Oleaceae). Kew Bull. 2002, 57:91-140.
    • (2002) Kew Bull. , vol.57 , pp. 91-140
    • Green, P.S.1
  • 30
    • 79957639729 scopus 로고    scopus 로고
    • Molecular phylogenetic reconstruction of Osmanthus Lour. (Oleaceae) and related genera based on three chloroplast intergenic spacers
    • Guo S.-Q., Xiong M., Ji C.-F., Zhang Z.-R., Li D.-Z., Zhang Z.-Y. Molecular phylogenetic reconstruction of Osmanthus Lour. (Oleaceae) and related genera based on three chloroplast intergenic spacers. Plant Syst. Evol. 2011, 294:57-64.
    • (2011) Plant Syst. Evol. , vol.294 , pp. 57-64
    • Guo, S.-Q.1    Xiong, M.2    Ji, C.-F.3    Zhang, Z.-R.4    Li, D.-Z.5    Zhang, Z.-Y.6
  • 33
    • 0036695118 scopus 로고    scopus 로고
    • Mathematical consequences of the genealogical species concept
    • Hudson R.R., Coyne J.A. Mathematical consequences of the genealogical species concept. Evolution 2002, 56:1557-1565.
    • (2002) Evolution , vol.56 , pp. 1557-1565
    • Hudson, R.R.1    Coyne, J.A.2
  • 34
    • 11144277878 scopus 로고    scopus 로고
    • Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models
    • Huelsenbeck J.P., Rannala B. Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models. Syst. Biol. 2004, 53:904-913.
    • (2004) Syst. Biol. , vol.53 , pp. 904-913
    • Huelsenbeck, J.P.1    Rannala, B.2
  • 35
    • 33646594138 scopus 로고    scopus 로고
    • From famine to feast? Selecting nuclear DNA sequence loci for plant species-level phylogeny reconstruction
    • Hughes C.E., Eastwood R.J., Bailey C.D. From famine to feast? Selecting nuclear DNA sequence loci for plant species-level phylogeny reconstruction. Phil. Trans. R. Soc. B 2006, 361:211-225.
    • (2006) Phil. Trans. R. Soc. B , vol.361 , pp. 211-225
    • Hughes, C.E.1    Eastwood, R.J.2    Bailey, C.D.3
  • 36
    • 0031115165 scopus 로고    scopus 로고
    • Phylogeny and phylogeography of the circumpolar genus Fraxinus (Oleaceae) based on internal transcribed spacer sequences of nuclear ribosomal DNA
    • Jeandroz S., Roy A., Bousquet J. Phylogeny and phylogeography of the circumpolar genus Fraxinus (Oleaceae) based on internal transcribed spacer sequences of nuclear ribosomal DNA. Mol. Phylogenet. Evol. 1997, 7:241-251.
    • (1997) Mol. Phylogenet. Evol. , vol.7 , pp. 241-251
    • Jeandroz, S.1    Roy, A.2    Bousquet, J.3
  • 37
    • 0024307824 scopus 로고
    • Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
    • Kishino K., Hasegawa M. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 1989, 29:170-179.
    • (1989) J. Mol. Evol. , vol.29 , pp. 170-179
    • Kishino, K.1    Hasegawa, M.2
  • 38
    • 79955080458 scopus 로고    scopus 로고
    • Biogeography and diversification of hermit spiders on Indian Ocean islands (Nephilidae: Nephilengys)
    • Kuntner M., Agnarsson I. Biogeography and diversification of hermit spiders on Indian Ocean islands (Nephilidae: Nephilengys). Mol. Phylogenet. Evol. 2011, 59:477-488.
    • (2011) Mol. Phylogenet. Evol. , vol.59 , pp. 477-488
    • Kuntner, M.1    Agnarsson, I.2
  • 39
    • 0032920002 scopus 로고    scopus 로고
    • Trois espèces nouvelles d'Oleaceae et note sur la présence d'Olea capensis dans l'Archipel des Comores
    • Labat J.-N., Pignal M., Pascal O. Trois espèces nouvelles d'Oleaceae et note sur la présence d'Olea capensis dans l'Archipel des Comores. Novon 1999, 9:66-72.
    • (1999) Novon , vol.9 , pp. 66-72
    • Labat, J.-N.1    Pignal, M.2    Pascal, O.3
  • 41
    • 77955070467 scopus 로고    scopus 로고
    • Multiple colonizations from Madagascar and converged acquisition of dioecy in the Mascarene Dombeyoideae (Malvaceae) as inferred from chloroplast and nuclear DNA sequences analyses
    • Le Péchon T., Dubuisson J.Y., Haevermans T., Cruaud C., Couloux A., Gigord L.D.B. Multiple colonizations from Madagascar and converged acquisition of dioecy in the Mascarene Dombeyoideae (Malvaceae) as inferred from chloroplast and nuclear DNA sequences analyses. Ann. Bot. 2010, 106:343-357.
    • (2010) Ann. Bot. , vol.106 , pp. 343-357
    • Le Péchon, T.1    Dubuisson, J.Y.2    Haevermans, T.3    Cruaud, C.4    Couloux, A.5    Gigord, L.D.B.6
  • 42
    • 34548321590 scopus 로고    scopus 로고
    • Gene relocations within chloroplast genomes of Jasminum and Menodora (Oleaceae) are due to multiple, overlapping inversions
    • Lee H.-L., Jansen R.K., Chumley T.W., Kim K.-J. Gene relocations within chloroplast genomes of Jasminum and Menodora (Oleaceae) are due to multiple, overlapping inversions. Mol. Biol. Evol. 2007, 24:1161-1180.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1161-1180
    • Lee, H.-L.1    Jansen, R.K.2    Chumley, T.W.3    Kim, K.-J.4
  • 43
    • 60349091886 scopus 로고    scopus 로고
    • Phylogenetic utility of nuclear nitrate reductase: a multi-locus comparison of nuclear and chloroplast sequence data for inference of relationships among American Lycieae (Solanaceae)
    • Levin R.A., Blanton J., Miller J.S. Phylogenetic utility of nuclear nitrate reductase: a multi-locus comparison of nuclear and chloroplast sequence data for inference of relationships among American Lycieae (Solanaceae). Mol. Phylogenet. Evol. 2009, 50:608-617.
    • (2009) Mol. Phylogenet. Evol. , vol.50 , pp. 608-617
    • Levin, R.A.1    Blanton, J.2    Miller, J.S.3
  • 44
    • 0036656002 scopus 로고    scopus 로고
    • Paraphyletic Syringa (Oleaceae): evidence from sequences of nuclear ribosomal DNA ITS and ETS regions
    • Li J., Alexander J.H., Zhang D. Paraphyletic Syringa (Oleaceae): evidence from sequences of nuclear ribosomal DNA ITS and ETS regions. Syst. Bot. 2002, 27:592-597.
    • (2002) Syst. Bot. , vol.27 , pp. 592-597
    • Li, J.1    Alexander, J.H.2    Zhang, D.3
  • 45
    • 33646423282 scopus 로고    scopus 로고
    • Allopolyploid origin of Cardamine asarifolia (Brassicaceae): incongruence between plastid and nuclear ribosomal DNA sequences solved by a single-copy nuclear gene
    • Lihová J., Shimizu K.K., Marhold K. Allopolyploid origin of Cardamine asarifolia (Brassicaceae): incongruence between plastid and nuclear ribosomal DNA sequences solved by a single-copy nuclear gene. Mol. Phylogenet. Evol. 2006, 39:759-786.
    • (2006) Mol. Phylogenet. Evol. , vol.39 , pp. 759-786
    • Lihová, J.1    Shimizu, K.K.2    Marhold, K.3
  • 46
    • 17044416291 scopus 로고    scopus 로고
    • Reconstructing patterns of reticulate evolution in plants
    • Linder C.R., Rieseberg L.H. Reconstructing patterns of reticulate evolution in plants. Am. J. Bot. 2004, 91:1700-1708.
    • (2004) Am. J. Bot. , vol.91 , pp. 1700-1708
    • Linder, C.R.1    Rieseberg, L.H.2
  • 47
    • 84877929942 scopus 로고    scopus 로고
    • Forest Restoration in Masoala National Park, Madagascar: The Contribution of Red-ruffed Lemur (Varecia rubra) and the Livelihoods of Subsistence Farmers at Ambatoladama
    • Ph.D. Dissertation. The University of Minnesota at St. Paul.
    • Martinez, B.T., 2010. Forest Restoration in Masoala National Park, Madagascar: The Contribution of Red-ruffed Lemur (Varecia rubra) and the Livelihoods of Subsistence Farmers at Ambatoladama. Ph.D. Dissertation. The University of Minnesota at St. Paul.
    • (2010)
    • Martinez, B.T.1
  • 48
    • 0030683524 scopus 로고    scopus 로고
    • Implications of recent geological investigations of the Mozambique Channel for the mammalian colonization of Madagascar
    • McCall R.A. Implications of recent geological investigations of the Mozambique Channel for the mammalian colonization of Madagascar. Proc. R. Soc. Lond. B 1997, 264:663-665.
    • (1997) Proc. R. Soc. Lond. B , vol.264 , pp. 663-665
    • McCall, R.A.1
  • 49
    • 0033302341 scopus 로고    scopus 로고
    • Incongruence between chloroplast and species phylogenies in Eucalyptus subgenus Monocalyptus (Myrtaceae)
    • McKinnon G.E., Steane D.A., Potts B.M., Vaillancourt R.E. Incongruence between chloroplast and species phylogenies in Eucalyptus subgenus Monocalyptus (Myrtaceae). Am. J. Bot. 1999, 86:1038-1046.
    • (1999) Am. J. Bot. , vol.86 , pp. 1038-1046
    • McKinnon, G.E.1    Steane, D.A.2    Potts, B.M.3    Vaillancourt, R.E.4
  • 52
    • 33845242233 scopus 로고
    • Fossil pollen records of extant angiosperms
    • Muller J. Fossil pollen records of extant angiosperms. Bot. Rev. 1981, 47:1-142.
    • (1981) Bot. Rev. , vol.47 , pp. 1-142
    • Muller, J.1
  • 53
    • 39149141072 scopus 로고    scopus 로고
    • AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
    • Nylander J.A.A., Wilgenbusch J.C., Warren D.L., Swofford D.L. AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinform. Appl. Note 2008, 24:581-583.
    • (2008) Bioinform. Appl. Note , vol.24 , pp. 581-583
    • Nylander, J.A.A.1    Wilgenbusch, J.C.2    Warren, D.L.3    Swofford, D.L.4
  • 54
    • 0001825177 scopus 로고
    • Paleobotanical evidences of the Tertiary history and origin of the Mediterranean sclerophyll dendroflora
    • Palamarev E. Paleobotanical evidences of the Tertiary history and origin of the Mediterranean sclerophyll dendroflora. Plant Syst. Evol. 1989, 162:93-107.
    • (1989) Plant Syst. Evol. , vol.162 , pp. 93-107
    • Palamarev, E.1
  • 57
    • 84877929893 scopus 로고
    • Oléacées. In: Humbert, H. (Ed.). Flore de Madagascar et des Comores. 166e famille. Muséum National D'Histoire Naturelle, Paris.
    • Perrier de la Bâthie, H., 1952. Oléacées. In: Humbert, H. (Ed.). Flore de Madagascar et des Comores. 166e famille. Muséum National D'Histoire Naturelle, Paris.
    • (1952)
    • Perrier De La Bâthie, H.1
  • 58
    • 84877928216 scopus 로고    scopus 로고
    • PIER (Pacific Island Ecosystem at Risk), Noronhia emarginata (Oleaceae).
    • PIER (Pacific Island Ecosystem at Risk), 2011. Noronhia emarginata (Oleaceae). http://www.hear.org/pier/species/noronhia_emarginata.htm.
    • (2011)
  • 59
    • 45849154165 scopus 로고    scopus 로고
    • JModelTest: phylogenetic model averaging
    • Posada D. JModelTest: phylogenetic model averaging. Mol. Biol. Evol. 2008, 25:1253-1256.
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 60
    • 44149095115 scopus 로고    scopus 로고
    • Ecological diversity and seasonal adaptations of mouse lemurs (Microcebus spp.)
    • Springer, New York, L. Gould, M.L. Sauther (Eds.)
    • Radespiel U. Ecological diversity and seasonal adaptations of mouse lemurs (Microcebus spp.). Lemurs: Ecology and Adaptation (Developments in Primatology: Progress and Prospects) 2007, 211-234. Springer, New York. L. Gould, M.L. Sauther (Eds.).
    • (2007) Lemurs: Ecology and Adaptation (Developments in Primatology: Progress and Prospects) , pp. 211-234
    • Radespiel, U.1
  • 61
    • 84877929244 scopus 로고    scopus 로고
    • FigTree v1.3.1.
    • Rambaut, A., 2006. FigTree v1.3.1. http://tree.bio.ed.ac.uk/software/figtree.
    • (2006)
    • Rambaut, A.1
  • 62
    • 84877928836 scopus 로고    scopus 로고
    • Tracer v1.5
    • Rambaut, A., Drummond, A., 2009. Tracer v1.5. http://beast.bio.ed.ac.uk/Tracer.
    • (2009)
    • Rambaut, A.1    Drummond, A.2
  • 64
    • 78649694222 scopus 로고    scopus 로고
    • Geographic and phylogenetic patterns in Silene section Melandrium (Caryophyllaceae) as inferred from chloroplast and nuclear DNA sequences
    • Rautenberg A., Hathaway L., Oxelman B., Prentice H.C. Geographic and phylogenetic patterns in Silene section Melandrium (Caryophyllaceae) as inferred from chloroplast and nuclear DNA sequences. Mol. Phylogenet. Evol. 2010, 57:978-991.
    • (2010) Mol. Phylogenet. Evol. , vol.57 , pp. 978-991
    • Rautenberg, A.1    Hathaway, L.2    Oxelman, B.3    Prentice, H.C.4
  • 66
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinform. Appl. Note 2003, 19:1572-1574.
    • (2003) Bioinform. Appl. Note , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 68
    • 43449107387 scopus 로고    scopus 로고
    • Coalescent analyses support multiple mainland-to-island dispersals in the evolution of Malagasy Triaenops bats (Chiroptera: Hipposideridae)
    • Russel A.L., Goodman S.M., Cox M.P. Coalescent analyses support multiple mainland-to-island dispersals in the evolution of Malagasy Triaenops bats (Chiroptera: Hipposideridae). J. Biogeogr. 2008, 35:995-1003.
    • (2008) J. Biogeogr. , vol.35 , pp. 995-1003
    • Russel, A.L.1    Goodman, S.M.2    Cox, M.P.3
  • 69
    • 0030733827 scopus 로고    scopus 로고
    • Congruence and consensus in the cotton tribe (Malvaceae)
    • Seelanan T., Schnabel A., Wendel J.F. Congruence and consensus in the cotton tribe (Malvaceae). Syst. Biol. 1997, 22:259-290.
    • (1997) Syst. Biol. , vol.22 , pp. 259-290
    • Seelanan, T.1    Schnabel, A.2    Wendel, J.F.3
  • 70
    • 0036623258 scopus 로고    scopus 로고
    • An approximately unbiased test of phylogenetic tree selection
    • Shimodaira H. An approximately unbiased test of phylogenetic tree selection. Syst. Biol. 2002, 51:492-508.
    • (2002) Syst. Biol. , vol.51 , pp. 492-508
    • Shimodaira, H.1
  • 71
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of log-likelihoods with applications to phylogenetic inference
    • Shimodaira H., Hasegawa M. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 1999, 16:1114-1116.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 72
    • 0036139287 scopus 로고    scopus 로고
    • CONSEL: for assessing the confidence of phylogenetic tree selection
    • Shimodaira H., Hasegawa M. CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinform. Appl. Note 2001, 17:1246-1247.
    • (2001) Bioinform. Appl. Note , vol.17 , pp. 1246-1247
    • Shimodaira, H.1    Hasegawa, M.2
  • 74
    • 0346091308 scopus 로고    scopus 로고
    • Use of nuclear genes for phylogeny reconstruction in plants
    • Small R.L., Cronn R.C., Wendel J.F. Use of nuclear genes for phylogeny reconstruction in plants. Aust. Syst. Bot. 2004, 17:145-170.
    • (2004) Aust. Syst. Bot. , vol.17 , pp. 145-170
    • Small, R.L.1    Cronn, R.C.2    Wendel, J.F.3
  • 75
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinform. Appl. Note 2006, 22:2688-2690.
    • (2006) Bioinform. Appl. Note , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 76
    • 0344779123 scopus 로고
    • Union of Chionanthus and Linociera (Oleaceae)
    • Stearn W.T. Union of Chionanthus and Linociera (Oleaceae). Ann. Missouri Bot. Gard. 1976, 63:355-357.
    • (1976) Ann. Missouri Bot. Gard. , vol.63 , pp. 355-357
    • Stearn, W.T.1
  • 77
    • 84990406047 scopus 로고
    • African species of Chionanthus L. (Oleaceae) hitherto included in Linociera Swartz
    • Stearn W.T. African species of Chionanthus L. (Oleaceae) hitherto included in Linociera Swartz. Bot. J. Linn. Soc. 1980, 80:191-206.
    • (1980) Bot. J. Linn. Soc. , vol.80 , pp. 191-206
    • Stearn, W.T.1
  • 78
    • 75149150388 scopus 로고    scopus 로고
    • TreeGraph2: combining and visualizing evidence from different phylogenetic analyses
    • Stöver B.C., Müller K.F. TreeGraph2: combining and visualizing evidence from different phylogenetic analyses. BMC Bioinform. 2010, 11:7.
    • (2010) BMC Bioinform. , vol.11 , pp. 7
    • Stöver, B.C.1    Müller, K.F.2
  • 79
    • 0031081404 scopus 로고    scopus 로고
    • Nuclear DNA-based markers for plant evolutionary biology
    • Strand A.E., Leebens-Mack J., Milligan B.G. Nuclear DNA-based markers for plant evolutionary biology. Mol. Ecol. 1997, 6:113-118.
    • (1997) Mol. Ecol. , vol.6 , pp. 113-118
    • Strand, A.E.1    Leebens-Mack, J.2    Milligan, B.G.3
  • 80
    • 84865020568 scopus 로고    scopus 로고
    • In and out of Madagascar: dispersal to peripheral islands, insular speciation and diversification of Indian Ocean daisy trees (Psiadia, Asteraceae)
    • Strijk J.S., Noyes R.D., Strasberg D., Cruaud C., Gavory F., Chase M.W., Abbott R.J., Thébaud C. In and out of Madagascar: dispersal to peripheral islands, insular speciation and diversification of Indian Ocean daisy trees (Psiadia, Asteraceae). PLoS ONE 2012, 7:e42932.
    • (2012) PLoS ONE , vol.7
    • Strijk, J.S.1    Noyes, R.D.2    Strasberg, D.3    Cruaud, C.4    Gavory, F.5    Chase, M.W.6    Abbott, R.J.7    Thébaud, C.8
  • 81
    • 51249185019 scopus 로고
    • Some fossil woods from the Palaeogene of Northern Kyushu, II
    • Suzuki M. Some fossil woods from the Palaeogene of Northern Kyushu, II. J. Plant Res. 1982, 95:281-294.
    • (1982) J. Plant Res. , vol.95 , pp. 281-294
    • Suzuki, M.1
  • 82
    • 0003474197 scopus 로고    scopus 로고
    • PAUP*. Phylogenetic Analysis Using Parsimony (* and Other Methods)
    • Version 4. Sinauer Associates, Sunderland, Massachusetts.
    • Swofford, D.L., 2002. PAUP*. Phylogenetic Analysis Using Parsimony (* and Other Methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
    • (2002)
    • Swofford, D.L.1
  • 83
  • 84
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 85
    • 0000611468 scopus 로고
    • Cyto-taxonomy and phylogeny of the Oleaceae
    • Taylor H. Cyto-taxonomy and phylogeny of the Oleaceae. Brittonia 1945, 5:337-367.
    • (1945) Brittonia , vol.5 , pp. 337-367
    • Taylor, H.1
  • 86
    • 9344257870 scopus 로고    scopus 로고
    • A hydraulic conductivity model points to post-Neogene survival of the Mediterranean olive
    • Terral J.F., Badal E., Heinz C., Roiron P., Thiebault S., Figueiral I. A hydraulic conductivity model points to post-Neogene survival of the Mediterranean olive. Ecology 2004, 85:3158-3165.
    • (2004) Ecology , vol.85 , pp. 3158-3165
    • Terral, J.F.1    Badal, E.2    Heinz, C.3    Roiron, P.4    Thiebault, S.5    Figueiral, I.6
  • 87
    • 1942485886 scopus 로고    scopus 로고
    • The effect of gene conversion on the divergence between duplicated genes
    • Teshima K.M., Innan H. The effect of gene conversion on the divergence between duplicated genes. Genetics 2004, 166:1553-1560.
    • (2004) Genetics , vol.166 , pp. 1553-1560
    • Teshima, K.M.1    Innan, H.2
  • 88
    • 84877928988 scopus 로고    scopus 로고
    • Comparative Feeding Ecology of Two Sympatric Mouse Lemurs (Microcebus spp.) in Northwestern Madagascar
    • Ph.D. Dissertation. The University of Veterinary Medicine at Hannover.
    • Thorén, S.I.K., 2011. Comparative Feeding Ecology of Two Sympatric Mouse Lemurs (Microcebus spp.) in Northwestern Madagascar. Ph.D. Dissertation. The University of Veterinary Medicine at Hannover.
    • (2011)
    • Thorén, S.I.K.1
  • 89
    • 34447279942 scopus 로고    scopus 로고
    • Profiling phylogenetic informativeness
    • Townsend J.P. Profiling phylogenetic informativeness. Syst. Biol. 2007, 56:222-231.
    • (2007) Syst. Biol. , vol.56 , pp. 222-231
    • Townsend, J.P.1
  • 90
    • 45849138951 scopus 로고    scopus 로고
    • Systematics of Fraxinus (Oleaceae) and evolution of dioecy
    • Wallander E. Systematics of Fraxinus (Oleaceae) and evolution of dioecy. Plant Syst. Evol. 2008, 273:25-49.
    • (2008) Plant Syst. Evol. , vol.273 , pp. 25-49
    • Wallander, E.1
  • 91
    • 0034524865 scopus 로고    scopus 로고
    • Phylogeny and classification of Oleaceae based on rps16 and trnL-F sequence data
    • Wallander E., Albert V.A. Phylogeny and classification of Oleaceae based on rps16 and trnL-F sequence data. Am. J. Bot. 2000, 87:1827-1841.
    • (2000) Am. J. Bot. , vol.87 , pp. 1827-1841
    • Wallander, E.1    Albert, V.A.2
  • 92
    • 84855258710 scopus 로고    scopus 로고
    • The promiscuous and the chaste: frequent allopolyploid speciation and its genomic consequences in American daisies (Melampodium sect. Melampodium; Asteraceae)
    • Weiss-Schneeweiss H., Blöch C., Turner B., Villaseñor J.L., Stuessy T.F., Schneeweiss G.M. The promiscuous and the chaste: frequent allopolyploid speciation and its genomic consequences in American daisies (Melampodium sect. Melampodium; Asteraceae). Evolution 2012, 66:211-228.
    • (2012) Evolution , vol.66 , pp. 211-228
    • Weiss-Schneeweiss, H.1    Blöch, C.2    Turner, B.3    Villaseñor, J.L.4    Stuessy, T.F.5    Schneeweiss, G.M.6
  • 93
    • 0000162362 scopus 로고    scopus 로고
    • Phylogenetic incongruence: window into genome history and molecular evolution
    • Kluwer Academic Publishers, Massachusetts, D.E. Soltis, P.S. Soltis, J.J. Doyle (Eds.)
    • Wendel J.F., Doyle J.J. Phylogenetic incongruence: window into genome history and molecular evolution. Molecular Systematics of Plants II: DNA Sequencing 1998, 265-296. Kluwer Academic Publishers, Massachusetts. D.E. Soltis, P.S. Soltis, J.J. Doyle (Eds.).
    • (1998) Molecular Systematics of Plants II: DNA Sequencing , pp. 265-296
    • Wendel, J.F.1    Doyle, J.J.2
  • 94
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Academic Press, San Diego, M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.)
    • White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: A Guide to Methods and Applications 1990, 315-322. Academic Press, San Diego. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 95
    • 79956344248 scopus 로고    scopus 로고
    • Estimating the species tree for Hawaiian Schiedea (Caryophyllaceae) from multiple loci in the presence of reticulate evolution
    • Willyard A., Wallace L.E., Wagner W.L., Weller S.G., Sakai A.K., Nepokroeff M. Estimating the species tree for Hawaiian Schiedea (Caryophyllaceae) from multiple loci in the presence of reticulate evolution. Mol. Phylogenet. Evol. 2011, 60:29-48.
    • (2011) Mol. Phylogenet. Evol. , vol.60 , pp. 29-48
    • Willyard, A.1    Wallace, L.E.2    Wagner, W.L.3    Weller, S.G.4    Sakai, A.K.5    Nepokroeff, M.6
  • 96
    • 33845390384 scopus 로고    scopus 로고
    • Has vicariance or dispersal been the predominant biogeographic force in Madagascar? Only time will tell
    • Yoder A.D., Nowak M.D. Has vicariance or dispersal been the predominant biogeographic force in Madagascar? Only time will tell. Annu. Rev. Ecol. Evol. Syst. 2006, 37:405-431.
    • (2006) Annu. Rev. Ecol. Evol. Syst. , vol.37 , pp. 405-431
    • Yoder, A.D.1    Nowak, M.D.2
  • 97
    • 0035527350 scopus 로고    scopus 로고
    • Failure of the ILD to determine data combinability for Slow Loris phylogeny
    • Yoder A.D., Irwin J.A., Payseur B.A. Failure of the ILD to determine data combinability for Slow Loris phylogeny. Syst. Biol. 2001, 50:408-424.
    • (2001) Syst. Biol. , vol.50 , pp. 408-424
    • Yoder, A.D.1    Irwin, J.A.2    Payseur, B.A.3
  • 98
    • 78649561508 scopus 로고    scopus 로고
    • Molecular phylogeny of Osmanthus (Oleaceae) based on non-coding chloroplast and nuclear ribosomal internal transcribed spacer regions
    • Yuan W.-J., Zhang W.-R., Han Y.-J., Dong M.-F., Shang F.-D. Molecular phylogeny of Osmanthus (Oleaceae) based on non-coding chloroplast and nuclear ribosomal internal transcribed spacer regions. J. Syst. Evol. 2010, 48:482-489.
    • (2010) J. Syst. Evol. , vol.48 , pp. 482-489
    • Yuan, W.-J.1    Zhang, W.-R.2    Han, Y.-J.3    Dong, M.-F.4    Shang, F.-D.5
  • 99
    • 78650328485 scopus 로고    scopus 로고
    • Conflicting phylogenies of section Macrantha (Acer, Aceroideae, Sapindaceae) based on chloroplast and nuclear DNA
    • Zhang Z., Li C., Li J. Conflicting phylogenies of section Macrantha (Acer, Aceroideae, Sapindaceae) based on chloroplast and nuclear DNA. Sys. Bot. 2010, 35:801-810.
    • (2010) Sys. Bot. , vol.35 , pp. 801-810
    • Zhang, Z.1    Li, C.2    Li, J.3
  • 100
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 2003, 31:3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.