Teuvoa, a new lichen genus in Megasporaceae (Ascomycota: Pertusariales), including Teuvoa junipericola sp. nov.

Lichenologist

Volumn 45, Issue 3, 2013, Pages 347-360

  Sohrabi, Mohammad ^a   Leavitt, Steven D ^b   Rico, Víctor J ^c   Halici, Mehmet G ^d   Shrestha, Gajendra ^e   Stenroos, Soili ^f  

^a IRANIAN RESEARCH ORGANIZATION FOR SCIENCE AND TECHNOLOGY IROST   (Iran)

^b FIELD MUSEUM OF NATURAL HISTORY   (United States)

^c UNIVERSIDAD COMPLUTENSE DE MADRID   (Spain)

^d ERCIYES UNIVERSITY   (Turkey)

^e BRIGHAM YOUNG UNIVERSITY   (United States)

^f UNIVERSITY OF HELSINKI   (Finland)

Author keywords

Aspicilia; Juniperus; Lecanora; lignicolous; Lobothallia; Pachyothallia; substratum preference; terricolous

Indexed keywords

EID: 84877330494     PISSN: 00242829     EISSN: 10961135     Source Type: Journal    
DOI: 10.1017/S0024282913000108     Document Type: Article

References (63)

1. Babulatova, N. E. (1988) Lichens of Sary-Dzhaz river basin (Central Tien-Shan). Botaniceskij Z urnal 73: 349-354.
2. Barkman, J. J. (1958) Phytosociology and Ecology of Cryptogamic Epiphytes. Including a Taxonomic Survey and Description of the Vegetation Units in Europe. Assen: Van Gorcum & Co.
3. Barreno, E. (1991) Phytogeography of terricolous lichens in the Iberian Peninsula and the Canary Islands. Botanika Chronika 10: 199-210.
4. Bas, C. (1969) Morphology and subdivision of Amanita and a monograph of its section Lepidella. Persoonia 5: 285-579.
5. Blanco, O., Crespo, A., Elix, J. A., Hawksworth, D. L. & Lumbsch, H. T. (2004) A molecular phylogeny and a new classification of parmelioid lichens containing Xanthoparmelia-type lichenan (Ascomycota: Lecanorales). Taxon 53: 959-975. (Pubitemid 40059402)
6. Castresana, J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 17: 540-552. (Pubitemid 30210700)
7. Clauzade, G. & Roux, C. (1984) Les genres Aspicilia et Bellemerea. Bulletin de la Societe Botanique du Centre-Ouest, Nouvelle Serie 15: 127-141.
8. Crespo, A. & Barreno, E. (1978) Sobre las comunidades terrolas de luenes vagantes (Sphaerothallio-Xanthoparmelion vagantis al. nov.). Acta Botanica Malacitana 4: 55-62.
9. Dzhuraeva, Z. (1974) Species lichenum novae e Turcomania. Novosti Sistematiki Nizshikh Rastenii. Moscow & Leningrad (St. Petersburg) 11: 294-296.
10. Egea, J. M. & Alonso, F. L. (1996) Patrones de distribucio en la flora liqueica xeroila del sureste de Españ a. Acta Botanica Malacitana 21: 35-47. (Pubitemid 28149093)
11. Farjon, A. (1992) The taxonomy of multiseed junipers ( Juniperus Sect. Sabina) in southwest Asia and east Africa (Taxonomic notes on Cupressaceae I). Edinburgh Journal of Botany 49: 251-283.
12. Farjon, A. (2005) A Monograph of Cupressaceae and Sciadopitys. Royal Botanic Gardens, Kew: Kew Publishing.
13. Follmann, G. & Crespo, A. (1974) Observaciones acerca de la distribucio de luenes españoles. II. Sphaerothalllia fruticulosa (Eversm.) Follm. & Crespo. Anales del Instituto Botanico A. J. Cavanilles 31: 325-333.
14. Gardes, M. & Bruns, T. D. (1993) ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Molecular Ecology Notes 2: 113-118.
15. Gintovt, E. A. (1959) Species formaeque novae et curiosae Lichenum epiphytorum quae in Asia Media inventae sunt. Uzbekskij Biologiceskij Z urnal (Taskent) 4: 72-75.
16. Hall, B. G. (2007) Phylogenetic Trees Made Easy: A How-To Manual. Sunderland, Massachusetts: Sinauer Associates.
17. Huelsenbeck, J., Ronquist, F., Nielsen, R. & Bollback, J. (2001) Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294: 2310-2314. (Pubitemid 33140548)
18. Kudratov, I. (1984) Lishajniki zapovednika "Romit". Izvestija Akademii Nauk Tadzhikskoj SSR. Otdelenie Biologicheskoe 3: 29-34.
19. Kudratov, I. (1985) Lishajniki Gornogo Zeravshana. Dushanbe: Donish.
20. Kudratov, I. & Mayrhofer, H. (2002) Catalogue of the lichenized and lichenicolous fungi of Tajikistan. Herzogia 15: 91-128.
21. Leavitt, S. D., Johnson, L. A. & St. Clair, L. L. (2011) Species delimitation and evolution in morphologically and chemically diverse communities of the lichen-forming genus Xanthoparmelia (Parmeliaceae, Ascomycota) in western North America. American Journal of Botany 98: 1-14.
22. Leavitt, S. D., Esslinger, T. L. & Lumbsch, H. T. (2012) Neogene-dominated diversification in neotropical montane lichens: dating divergence events in the lichen-forming fungal genus Oropogon (Parmeliaceae). American Journal of Botany 99: 1764-1777.
23. Lee, M. S. Y. (2001) Unalignable sequences and molecular evolution. Trends in Ecology & Evolution 16: 681-685. (Pubitemid 33082107)
24. Liu, K., Raghavan, S., Nelesen, S., Linder, C. R. & Warnow, T. (2009) Rapid and accurate large-scale coestimation of sequence alignments and phylogenetic trees. Science 324: 1561-1564.
25. Liu, K., Warnow, T. J., Holder, M. T., Nelesen, S. M., Yu, J., Stamatakis, A. P. & Linder, C. R. (2012) SATeII: very fast and accurate simultaneous estimation of multiple sequence alignments and phylogenetic trees. Systematic Biology 61: 90-106.
26. Lumbsch, H. T., Schmitt, I., Lucking, R., Wiklund, E. & Wedin, M. (2007) The phylogenetic placement of Ostropales within Lecanoromycetes (Ascomycota) revisited. Mycological Research 111: 257-267. (Pubitemid 46507746)
27. Lumbsch, H. T., Ahti, T., Altermann, S., Amo de Paz, G., Aptroot, A., Arup, U., Bacenas Peñ a, A., Bawingan, P. A., Benatti, M. N., Betancourt, L. et al. (2011) One hundred new species of lichenized fungi: a signature of undiscovered global diversity. Phytotaxa 18: 1-127.
28. Mangold, A., Mart, M. P., Kalb, K., Lucking, R. & Lumbsch, H. T. (2008) Molecular data show that Topeliopsis (Ascomycota, Thelotremataceae) is polyphyletic. Lichenologist 40: 39-46. (Pubitemid 351206409)
29. Martez, I., Arago, G., Carrio, F. J., Escudero, A., Burgaz, A. R. & Coppins, B. J. (2003) Threatened lichens in central Spain. Cryptogamie, Mycologie 24: 73-96.
30. Moya, J. J., Ros, R. M., Guerra, J. & Cano, M. J. (1995) Weissia papillosissima Laz. (Pottiaceae, Musci) a species new to the European bryophyte flora. Journal of Bryology 18: 493-498.
31. Nordin, A., Tibell, L. & Savic S. (2010) Phylogeny and taxonomy of Aspicilia and Megasporaceae. Mycologia 102: 1339-1349.
32. Orange, A., James, P. W. & White, F. J. (2001) Microchemical Methods for the Identification of Lichens. London: British Lichen Society.
33. Owe-Larsson, B., Nordin, A. & Tibell, L. (2007) Aspicilia. In Lichen Flora of the Greater Sonoran Desert Region, Vol. 3 (T. H. Nash III, C. Gries & F. Bungartz, eds): 61-108. Tempe, Arizona: Lichens Unlimited, Arizona State University.
34. Owe-Larsson, B., Nordin, A., Tibell, L. & Sohrabi, M. (2011) Circinaria arida spec. nova and the Aspicilia desertorum complex. Bibliotheca Lichenologica 106: 231-242.
35. Posada, D. & Buckley, T. R. (2004) Model selection and model averaging in phylogenetics: advantages of Akaike Information Criterion and Bayesian approaches over likelihood ratio tests. Systematic Biology 53: 793-808. (Pubitemid 39568279)
36. Posada, D. & Crandall, K. A. (2001) Selecting the bestfit model of nucleotide substitution. Systematic Biology 50: 580-601.
37. Queel, P. (1978) Analysis of the flora of Mediterranean and Saharan Africa. Annals of the Missouri Botanical Garden 65: 479-534.
38. Rambaut, A. & Drummond, A. (2005). Tracer v1.5: MCMC Trace Analysis Tool. University of Edinburgh, Edinburgh. http://tree.bio.ed.ac.uk/software/ tracer/
39. R Development Core Team (2008) R: A Language and Environment for Statistical Computing. Vienna: R Foundation for Statistical Computing. URL: http://www.R-project.org. Accessed date: 08 February 2013.
40. Raven, P. H. (1971) Floristic relationships between distant areas with Mediterranean-type climates. In Plant Life of South-West Asia (P. Davis, P. Harper & I. Hedge, eds): 119-134. Edinburgh: The Botanical Society of Edinburgh.
41. Rico, V. J. (1999) Aspicilia crespiana, a new lichen species from southern Europe. Lichenologist 31: 129-139. (Pubitemid 29172848)
42. Rico, V. J., Arago, G. & Esnault, J. (2007) Aspicilia uxoris, an epiphytic species from Algeria, Morocco and Spain. Lichenologist 39: 109-119. (Pubitemid 46340593)
43. Ronquist, F. & Huelsenbeck, J. P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574. (Pubitemid 37038874)
44. Rosentreter, R. (1993) Vagrant lichens in North America. Bryologist 96: 333-338. (Pubitemid 24414825)
45. Schmitt, I., Yamamoto, Y. & Lumbsch, H. T. (2006) Phylogeny of Pertusariales (Ascomycotina): resurrection of Ochrolechiaceae and new circumscription of Megasporaceae. Journal of the Hattori Botanical Laboratory 100: 753-764. (Pubitemid 44884640)
46. Schoch, C. L., Seifert, K. A., Huhndorf, S., Robert, V., Spouge, J. L., Levesque, C. A., Chen, W. & Fungal Barcoding Consortium (2012) Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proceedings of the National Academy of Sciences of the United States of America 109: 6241-6246.
47. Shafeev, N. G. (1953) Ad cognitionem lichenum vallis Ferganae. Botaniceskie Materialy Otdela Sporovyh Rastenij Botaniceskogo Instituta Imeni V. L. Komarova Akademii Nauk SSSR. 9: 17-26.
48. Shrestha, G. & St. Clair, L. L. (2009) The lichen flora of southwestern Colorado. Evansia 26: 102-123.
49. Sohrabi, M. & Ahti, T. (2010) Nomenclatural synopsis of the Old World's "manna" lichens of the genus Aspicilia (Megasporaceae). Taxon 59: 628-636.
50. Sohrabi, M.,Myllys, L. & Stenroos, S. (2010a) Successful DNA sequencing of a 75 year-old herbarium specimen of Aspicilia aschabadensis ( J. Steiner) Mereschk. Lichenologist 42: 626-628.
51. Sohrabi, M., Owe-Larsson, B., Nordin, N. & Obermayer, W. (2010b) Aspicilia tibetica, a new terricolous species of the Himalayas and adjacent regions. Mycological Progress 9: 491-499.
52. Sohrabi, M., Ahti, T. & Litterski, B. (2011a) Aspicilia digitata sp. nov., a new vagrant lichen from Kyrgyzstan. Lichenologist 43: 39-46.
53. Sohrabi, M., Stenroos, S., Honabba, F., Owe-Larsson, B. & Nordin, A. (2011b) Aspicilia rogeri sp. nov. (Megasporaceae) and other allied vagrant species in North America. Bryologist 114: 178-189.
54. Sohrabi, M., Stenroos, S., Myllys, L., Shting U., Ahti, T. & Hyvoen, J. (2013) Phylogeny and taxonomy of the 'manna lichens'. Mycological Progress (in press) DOI 10.1007/s11557-012-0830-1.
55. Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. (Pubitemid 44642609)
56. Stamatakis, A., Hoover, P. & Rougemont, J. (2008) A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology 57: 758-771.
57. Talavera, G. & Castresana, J. (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology 56: 564-577. (Pubitemid 47171631)
58. Tomin, M. P. (1950) Species lichenum URSS novae et curiosae II. Sbornik Naucnyh Trudov Institut Biologii, Akademija Nauk Belorusskoj SSR (Minsk) 1: 77-86.
59. Vidakovic, M. (1991) Conifers: Morphology and Variation (Translated from Croatian byMaja Soljan). Croatia: Graficki Zavod Hrvatske.
60. Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246. (Pubitemid 20236711)
61. Wen, J. & Ickert-Bond, S. (2009) Evolution of Madrean-Tethyan disjunctions and the North and South American amphitropical disjunctions in plants. Journal of Systematics and Evolution 47: 331-348.
62. Wheeler, D. L., Barrett, T., Benson, D. A., Bryant, S. H., Canese, K., Chetvernin, V., Church, D. M., DiCuccio, M., Edgar, R., Federhen, S., et al. (2005) Database resources of the National Center for Biotechnology Information. Nucleic Acids Research 33: D39-D45. (Pubitemid 40207828)
63. White, T. J., Bruns, T. D., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications (M. A. Innis, D. H. Gelfand, J. J. Sninsky & T. J. White, eds): 315-322. San Diego: Academic Press.