메뉴 건너뛰기




Volumn 5, Issue 5, 2013, Pages 390-394

Functional RNAs exhibit tolerance for non-heritable 2′-5′ versus 3′-5′ backbone heterogeneity

Author keywords

[No Author keywords available]

Indexed keywords

RNA;

EID: 84876824197     PISSN: 17554330     EISSN: 17554349     Source Type: Journal    
DOI: 10.1038/nchem.1623     Document Type: Article
Times cited : (91)

References (44)
  • 1
    • 36849148382 scopus 로고
    • The RNA world
    • Gilbert, W. The RNA world. Nature 319, 618 (1986
    • (1986) Nature , vol.319 , pp. 618
    • Gilbert, W.1
  • 2
    • 0024476917 scopus 로고
    • RNA evolution and the origins of life
    • Joyce, G. F. RNA evolution and the origins of life. Nature 338, 217-224 (1989
    • (1989) Nature , vol.338 , pp. 217-224
    • Joyce, G.F.1
  • 3
    • 0003604405 scopus 로고    scopus 로고
    • 2nd edn (eds R. F. Gesteland & J. F. Atkins) Cold Spring Harbor Laboratory Press
    • Joyce, G. F. & Orgel, L. E. in The RNAWorld 2nd edn (eds R. F. Gesteland & J. F. Atkins) 49-77 (Cold Spring Harbor Laboratory Press, 1999
    • (1999) RNA World , pp. 49-77
    • Joyce, G.F.1    Orgel, L.E.2
  • 4
    • 0034637111 scopus 로고    scopus 로고
    • The complete atomic structure of the large ribosomal subunit at 2.4 Ångstrom resolution
    • Ban, N., Nissen, P., Hansen, J., Moore, P. B. & Steitz, T. A. The complete atomic structure of the large ribosomal subunit at 2.4 Ångstrom resolution. Science 289, 905-920 (2000
    • (2000) Science , vol.289 , pp. 905-920
    • Ban, N.1    Nissen, P.2    Hansen, J.3    Moore, P.B.4    Steitz, T.A.5
  • 5
    • 0034637161 scopus 로고    scopus 로고
    • The structural basis of ribosome activity in peptide bond synthesis
    • Nissen, P., Hansen, J., Ban, N., Moore, P. B. & Steitz, T. A. The structural basis of ribosome activity in peptide bond synthesis. Science 289, 920-930 (2000
    • (2000) Science , vol.289 , pp. 920-930
    • Nissen, P.1    Hansen, J.2    Ban, N.3    Moore, P.B.4    Steitz, T.A.5
  • 6
    • 66149108671 scopus 로고    scopus 로고
    • Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions
    • Powner, M.W., Gerland, B. & Sutherland, J. D. Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions. Nature 459, 239-242 (2009
    • (2009) Nature , vol.459 , pp. 239-242
    • Powner, M.W.1    Gerland, B.2    Sutherland, J.D.3
  • 7
    • 78649927354 scopus 로고    scopus 로고
    • Chemoselective multicomponent one-pot assembly of purine precursors in water
    • Powner, M. W., Sutherland, J. D. & Szostak, J. W. Chemoselective multicomponent one-pot assembly of purine precursors in water. J. Am. Chem. Soc. 132, 16677-16688 (2010
    • (2010) J. Am. Chem. Soc , vol.132 , pp. 16677-16688
    • Powner, M.W.1    Sutherland, J.D.2    Szostak, J.W.3
  • 8
    • 77953942525 scopus 로고    scopus 로고
    • Phosphate-mediated interconversion of riboand arabino-configured prebiotic nucleotide intermediates
    • Powner, M.W. & Sutherland, J. D. Phosphate-mediated interconversion of riboand arabino-configured prebiotic nucleotide intermediates. Angew. Chem. Int. Ed. 49, 4641-4643 (2010
    • (2010) Angew. Chem. Int. Ed. , vol.49 , pp. 4641-4643
    • Powner, M.W.1    Sutherland, J.D.2
  • 9
    • 0029876064 scopus 로고    scopus 로고
    • Synthesis of long prebiotic oligomers on mineral surfaces
    • Ferris, J. P. Jr, Hill, A. R., Liu, R. & Orgel, L. E. Synthesis of long prebiotic oligomers on mineral surfaces. Nature 381, 59-61 (1996
    • (1996) Nature , vol.381 , pp. 59-61
    • Ferris Jr., J.P.1    Hill, A.R.2    Liu, R.3    Orgel, L.E.4
  • 10
    • 0035453348 scopus 로고    scopus 로고
    • Eutectic phases in ice facilitate nonenzymatic nucleic acid synthesis
    • Kanavarioti, A., Monnard, P-A. & Deamer, D.W. Eutectic phases in ice facilitate nonenzymatic nucleic acid synthesis. Astrobiology 1, 271-281 (2001
    • (2001) Astrobiology , vol.1 , pp. 271-281
    • Kanavarioti, A.1    Monnard, P.-A.2    Deamer, D.W.3
  • 11
    • 0027746565 scopus 로고
    • The limits of template-directed synthesis with nucleoside-5'-phosphoro(2- methyl)imidazolides
    • Hill, A. J., Orgel, L. & Wu, T. The limits of template-directed synthesis with nucleoside-5'-phosphoro(2-methyl)imidazolides. Origins Life Evol. Biospheres 23, 285-290 (1993
    • (1993) Origins Life Evol. Biospheres , vol.23 , pp. 285-290
    • Hill, A.J.1    Orgel, L.2    Wu, T.3
  • 12
    • 3042709433 scopus 로고    scopus 로고
    • Prebiotic chemistry and the origin of the RNA world
    • Orgel, L. E. Prebiotic chemistry and the origin of the RNA world. Crit. Rev. Biochem. Mol. Biol. 39, 99-123 (2004
    • (2004) Crit. Rev. Biochem. Mol. Biol , vol.39 , pp. 99-123
    • Orgel, L.E.1
  • 13
    • 79960684944 scopus 로고    scopus 로고
    • Efficient enzyme-free copying of all four nucleobases templated by immobilized RNA
    • Deck, C., Jauker, M. & Richert, C. Efficient enzyme-free copying of all four nucleobases templated by immobilized RNA. Nature Chem. 3, 603-608 (2011
    • (2011) Nature Chem , vol.3 , pp. 603-608
    • Deck, C.1    Jauker, M.2    Richert, C.3
  • 14
    • 84864875884 scopus 로고    scopus 로고
    • The eightfold path to non-enzymatic RNA replication
    • 10.1186/1759-2208-3-2
    • Szostak, J. W. The eightfold path to non-enzymatic RNA replication. J. Syst. Chem. 3, 2 doi: 10.1186/1759-2208-3-2 (2012
    • (2012) J. Syst. Chem , vol.3 , Issue.2
    • Szostak, J.W.1
  • 15
    • 0023372377 scopus 로고
    • The case for an ancestral genetic system involving simple analogues of the nucleotides
    • Joyce, G. F., Schwartz, A.W., Miller, S. L. & Orgel, L. E. The case for an ancestral genetic system involving simple analogues of the nucleotides. Proc. Natl Acad. Sci. USA 84, 4398-4402 (1987
    • (1987) Proc. Natl Acad. Sci. USA , vol.84 , pp. 4398-4402
    • Joyce, G.F.1    Schwartz, A.W.2    Miller, S.L.3    Orgel, L.E.4
  • 16
    • 0027364174 scopus 로고
    • PNA hybridizes to complementary oligonucleotides obeying the Watson-Crick hydrogen-bonding rules
    • Egholm, M. et al. PNA hybridizes to complementary oligonucleotides obeying the Watson-Crick hydrogen-bonding rules. Nature 365, 566-568 (1993
    • (1993) Nature , vol.365 , pp. 566-568
    • Egholm, M.1
  • 17
    • 0029896648 scopus 로고    scopus 로고
    • Nonionic analogs of RNA with dimethylene sulfone bridges
    • Richert, C., Roughton, A. L. & Benner, S. A. Nonionic analogs of RNA with dimethylene sulfone bridges. J. Am. Chem. Soc. 118, 4518-4531 (1996
    • (1996) J. Am. Chem. Soc , vol.118 , pp. 4518-4531
    • Richert, C.1    Roughton, A.L.2    Benner, S.A.3
  • 18
    • 0344326234 scopus 로고    scopus 로고
    • Chemical etiology of nucleic acid structure
    • Eschenmoser, A. Chemical etiology of nucleic acid structure. Science 284, 2118-2124 (1999
    • (1999) Science , vol.284 , pp. 2118-2124
    • Eschenmoser, A.1
  • 19
    • 0033709099 scopus 로고    scopus 로고
    • Nonenzymatic oligomerization on templates containing phosphodiester- linked acyclic glycerol nucleic acid analogues
    • Chaput, J. C. & Switzer, C. Nonenzymatic oligomerization on templates containing phosphodiester-linked acyclic glycerol nucleic acid analogues. J. Mol. Evol. 51, 464-470 (2000
    • (2000) J. Mol. Evol , vol.51 , pp. 464-470
    • Chaput, J.C.1    Switzer, C.2
  • 21
    • 64549154434 scopus 로고    scopus 로고
    • N2'-P3' phosphoramidate glycerol nucleic acid as a potential alternative genetic system
    • Chen, J. J., Cai, X. & Szostak, J. W. N2'-P3' phosphoramidate glycerol nucleic acid as a potential alternative genetic system. J. Am. Chem. Soc. 131, 2119-2121 (2009
    • (2009) J. Am. Chem. Soc , vol.131 , pp. 2119-2121
    • Chen, J.J.1    Cai, X.2    Szostak, J.W.3
  • 23
    • 0000806492 scopus 로고
    • Hydrolytic stability of helical RNA - selective advantage for the natural 3',5'-bond
    • Usher, D. A. & McHale, A. H. Hydrolytic stability of helical RNA - selective advantage for the natural 3',5'-bond. Proc. Natl Acad. Sci. USA 73, 1149-1153 (1976
    • (1976) Proc. Natl Acad. Sci. USA , vol.73 , pp. 1149-1153
    • Usher, D.A.1    McHale, A.H.2
  • 24
    • 0019333283 scopus 로고
    • Catalysis of accurate poly (C)-directed synthesis of 3'-5'-linked oligoguanylates by Zn2+
    • Bridson, P. K. & Orgel, L. E. Catalysis of accurate poly(C)-directed synthesis of 3'-5'-linked oligoguanylates by Zn2+. J. Mol. Biol. 144, 567-577 (1980
    • (1980) J. Mol. Biol , Issue.144 , pp. 567-577
    • Bridson, P.K.1    Orgel, L.E.2
  • 25
    • 0020370504 scopus 로고
    • Oligomerization of (guanosine-5'-phosphor) 2- methylimidazole on poly(C) - an RNA-polymerase model
    • Inoue, T. & Orgel, L. E. Oligomerization of (guanosine-5'-phosphor)- 2- methylimidazole on poly(C) - an RNA-polymerase model. J. Mol. Biol. 162, 201-217 (1982
    • (1982) J. Mol. Biol , Issue.162 , pp. 201-217
    • Inoue, T.1    Orgel, L.E.2
  • 26
    • 0029915714 scopus 로고    scopus 로고
    • Nonenzymatic template-directed ligation of oligoribonucleotides is highly regioselective for the formation of 3'-5' phosphodiester bonds
    • Rohatgi, R., Bartel, D. P. & Szostak, J. W. Nonenzymatic, template-directed ligation of oligoribonucleotides is highly regioselective for the formation of 3'-5' phosphodiester bonds. J. Am. Chem. Soc. 118, 3340-3344 (1996
    • (1996) J. Am. Chem. Soc , vol.118 , pp. 3340-3344
    • Rohatgi, R.1    Bartel, D.P.2    Szostak, J.W.3
  • 27
    • 0029832218 scopus 로고    scopus 로고
    • RNA-catalysed RNA polymerization using nucleoside triphosphates
    • Ekland, E. H. & Bartel, D. P. RNA-catalysed RNA polymerization using nucleoside triphosphates. Nature 382, 373-376 (1996
    • (1996) Nature , vol.382 , pp. 373-376
    • Ekland, E.H.1    Bartel, D.P.2
  • 28
    • 0035906978 scopus 로고    scopus 로고
    • RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension
    • Johnston, W. K., Unrau, P. J., Lawrence, M. S., Glasner, M. E. & Bartel, D. P. RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension. Science 292, 1319-1325 (2001
    • (2001) Science , vol.292 , pp. 1319-1325
    • Johnston, W.K.1    Unrau, P.J.2    Lawrence, M.S.3    Glasner, M.E.4    Bartel, D.P.5
  • 29
    • 0030799343 scopus 로고    scopus 로고
    • Activity of 2',5'-linked RNA in the template-directed oligomerization of mononucleotides
    • Prakash, T. P., Roberts, C. & Switzer, C. Activity of 2',5'-linked RNA in the template-directed oligomerization of mononucleotides. Angew. Chem. Int. Ed. Engl. 36, 1522-1523 (1997
    • (1997) Angew. Chem. Int. Ed. Engl , vol.36 , pp. 1522-1523
    • Prakash, T.P.1    Roberts, C.2    Switzer, C.3
  • 30
    • 80051958795 scopus 로고    scopus 로고
    • Evolution of functional nucleic acids in the presence of nonheritable backbone heterogeneity
    • Trevino, S. G., Zhang, N., Elenko, M. P., Luptak, A. & Szostak, J.W. Evolution of functional nucleic acids in the presence of nonheritable backbone heterogeneity. Proc. Natl Acad. Sci. USA 108, 13492-13497 (2011
    • (2011) Proc. Natl Acad. Sci. USA , vol.108 , pp. 13492-13497
    • Trevino, S.G.1    Zhang, N.2    Elenko, M.P.3    Luptak, A.4    Szostak, J.W.5
  • 31
    • 0027445885 scopus 로고
    • Oligoribonucleotides containing 2',5'- phosphodiester linkages exhibit binding selectivity for 3',5'-RNA over 3',5'-ssDNA
    • Giannaris, P. A. & Damha, M. J. Oligoribonucleotides containing 2',5'- phosphodiester linkages exhibit binding selectivity for 3',5'-RNA over 3',5'-ssDNA. Nucleic Acids Res. 21, 4742-4749 (1993
    • (1993) Nucleic Acids Res , vol.21 , pp. 4742-4749
    • Giannaris, P.A.1    Damha, M.J.2
  • 32
    • 0032546612 scopus 로고    scopus 로고
    • Physicochemical And Biochemical Properties Of 2'5'-linked RNA And 2'5'-RNA: 3'5'-RNA 'hybrid' duplexes
    • Wasner, M. et al. Physicochemical and biochemical properties of 2',5'-linked RNA and 2',5'-RNA: 3',5'-RNA 'hybrid' duplexes. Biochemistry 37, 7478-7486 (1998
    • (1998) Biochemistry , vol.37 , pp. 7478-7486
    • Wasner, M.1
  • 33
    • 0027995790 scopus 로고
    • Isolation of RNA aptamers for biological cofactors by in-vitro selection
    • Burgstaller, P. & Famulok, M. Isolation of RNA aptamers for biological cofactors by in-vitro selection. Angew. Chem. Int. Ed. Engl. 33, 1084-1087 (1994
    • (1994) Angew. Chem. Int. Ed. Engl , vol.33 , pp. 1084-1087
    • Burgstaller, P.1    Famulok, M.2
  • 34
    • 0029864853 scopus 로고    scopus 로고
    • Molecular recognition in the FMN-RNA aptamer complex
    • Fan, P., Suri, A. K., Fiala, R., Live, D. & Patel, D. J. Molecular recognition in the FMN-RNA aptamer complex. J. Mol. Biol. 258, 480-500 (1996
    • (1996) J. Mol. Biol , vol.258 , pp. 480-500
    • Fan, P.1    Suri, A.K.2    Fiala, R.3    Live, D.4    Patel, D.J.5
  • 35
    • 0030939002 scopus 로고    scopus 로고
    • The structure, function and application of the hammerhead ribozyme
    • Birikh, K. R., Heaton, P. A. & Eckstein, F. The structure, function and application of the hammerhead ribozyme. Eur. J. Biochem. 245, 1-16 (1997
    • (1997) Eur. J. Biochem , vol.245 , pp. 1-16
    • Birikh, K.R.1    Heaton, P.A.2    Eckstein, F.3
  • 36
    • 0016849198 scopus 로고
    • Oligonucleotide synthesis catalyzed by the Zn2+ ion
    • Hiraki, S. & Orgel, L. E. Oligonucleotide synthesis catalyzed by the Zn2+ ion. J. Am. Chem. Soc. 97, 3532-3533 (1975
    • (1975) J. Am. Chem. Soc , vol.97 , pp. 3532-3533
    • Hiraki, S.1    Orgel, L.E.2
  • 37
    • 0033546087 scopus 로고    scopus 로고
    • Cleavage activity of a hammerhead ribozyme domain containing 2',5'-phosphodiester linkages
    • Burlina, F., Fourrey, J., Lefort, V. & Favre, A. Cleavage activity of a hammerhead ribozyme domain containing 2',5'-phosphodiester linkages. Tetrahedron Lett. 40, 4559-4562 (1999
    • (1999) Tetrahedron Lett , vol.40 , pp. 4559-4562
    • Burlina, F.1    Fourrey, J.2    Lefort, V.3    Favre, A.4
  • 38
    • 0032832044 scopus 로고    scopus 로고
    • Ribozyme cleavage of a 2',5'-phosphodiester linkage: Mechanism and a restricted divalent metal-ion requirement
    • Shih, I. & Been, M. D. Ribozyme cleavage of a 2',5'-phosphodiester linkage: Mechanism and a restricted divalent metal-ion requirement. RNA 5, 1140-1148 (1999
    • (1999) RNA , vol.5 , pp. 1140-1148
    • Shih, I.1    Been, M.D.2
  • 39
    • 0029165074 scopus 로고
    • Reverse transcriptase reads through a 2'-5' linkage and a 2'-thiophosphate in a template
    • Lorsch, J. R., Bartel, D. P. & Szostak, J. W. Reverse transcriptase reads through a 2'-5' linkage and a 2'-thiophosphate in a template. Nucleic Acids Res. 23, 2811-2814 (1995
    • (1995) Nucleic Acids Res , vol.23 , pp. 2811-2814
    • Lorsch, J.R.1    Bartel, D.P.2    Szostak, J.W.3
  • 40
    • 84860013215 scopus 로고    scopus 로고
    • Synthetic genetic polymers capable of heredity and evolution
    • Pinheiro, V. B. et al. Synthetic genetic polymers capable of heredity and evolution. Science 336, 341-344 (2012
    • (2012) Science , vol.336 , pp. 341-344
    • Pinheiro, V.B.1
  • 41
    • 70149117710 scopus 로고    scopus 로고
    • Life on earth
    • Ricardo, A. & Szostak, J. W. Life on earth. Sci Am 301, 54-61 (2009
    • (2009) Sci Am , vol.301 , pp. 54-61
    • Ricardo, A.1    Szostak, J.W.2
  • 42
    • 77952906690 scopus 로고    scopus 로고
    • Expanding roles for diverse physical phenomena during the origin of life
    • Budin, I. & Szostak, J. W. Expanding roles for diverse physical phenomena during the origin of life. Annu. Rev. Biophys. 39, 245-263 (2010
    • (2010) Annu. Rev. Biophys , vol.39 , pp. 245-263
    • Budin, I.1    Szostak, J.W.2
  • 43
    • 79955109405 scopus 로고    scopus 로고
    • Physical effects underlying the transition from primitive to modern cell membranes
    • Budin, I. & Szostak, J. W. Physical effects underlying the transition from primitive to modern cell membranes. Proc. Natl Acad. Sci. USA 108, 5249-5254 (2011
    • (2011) Proc. Natl Acad. Sci. USA , vol.108 , pp. 5249-5254
    • Budin, I.1    Szostak, J.W.2
  • 44
    • 0033922698 scopus 로고    scopus 로고
    • Analysis of drug-DNA binding data
    • Qu, X. G. & Chaires, J. B. Analysis of drug-DNA binding data. Method. Enzymol. 321, 353-369 (2000
    • (2000) Method. Enzymol , vol.321 , pp. 353-369
    • Qu, X.G.1    Chaires, J.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.