Thermostable and alkalistable endoxylanase of the extremely thermophilic bacterium geobacillus thermodenitrificans TSAA1: Cloning, expression, characteristics and its applicability in generating xylooligosaccharides and fermentable sugars

Applied Biochemistry and Biotechnology

Volumn 170, Issue 1, 2013, Pages 119-130

  Verma, Digvijay ^a   Anand, Ashima ^a   Satyanarayana, T ^a  

^a UNIVERSITY OF DELHI   (India)

Author keywords

Geobacillus thermodenitrificans; Prebiotics; Pulp pre bleaching; Thermo alkalistable xylanase; Xylooligosaccharides

Indexed keywords

GEOBACILLUS THERMODENITRIFICANS; PRE-BLEACHING; PREBIOTICS; XYLANASES; XYLOOLIGOSACCHARIDES;

AMINO ACIDS; BLEACHING; CHROMOPHORES; CLEANING; ESCHERICHIA COLI;

CLONING;

BACTERIAL ENZYME; ENDOXYLANASE; GLYCOSIDASE; OLIGOSACCHARIDE; SUGAR; UNCLASSIFIED DRUG; XYLAN; XYLAN ENDO 1,3 BETA XYLOSIDASE; XYLOOLIGOSACCHARIDE; XYLOSE;

ALKALINITY; AMINO ACID SEQUENCE; ARTICLE; ENZYME ACTIVITY; ESCHERICHIA COLI; GENE AMPLIFICATION; GEOBACILLUS; GEOBACILLUS THERMODENITRIFICANS; HYDROLYSIS; MOLECULAR CLONING; MOLECULAR PHYLOGENY; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PROTEIN EXPRESSION; SACCHARIFICATION; SEQUENCE ANALYSIS; THERMOSTABILITY;

BACTERIAL PROTEINS; CLONING, MOLECULAR; DISACCHARIDES; ENDO-1,4-BETA XYLANASES; ENZYME STABILITY; ESCHERICHIA COLI; FERMENTATION; GENE EXPRESSION; GEOBACILLUS; GLUCURONATES; HYDROGEN-ION CONCENTRATION; KINETICS; MODELS, MOLECULAR; OLIGOSACCHARIDES; OPEN READING FRAMES; RECOMBINANT PROTEINS; TEMPERATURE; XYLANS; XYLOSE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; GEOBACILLUS THERMODENITRIFICANS;

EID: 84876682808     PISSN: 02732289     EISSN: 15590291     Source Type: Journal    
DOI: 10.1007/s12010-013-0174-6     Document Type: Article

References (49)

1. Collins, T.; Gerday, C.; Feller, G. (2005). FEMS Microbiology Reviews, 29, 3-23. (Pubitemid 40103579)
2. Bazzicalupo, M.; Fani, R. (1995). In: Methods in molecular biology, species diagnostic protocols: PCR and other nucleic acids methods. (Eds. Clapp, J.P.), pp. 155-77. Totowa: Humana Press.
3. Verma, D.; Satyanarayana, T. (2012). Bioresource Technology, 107, 333-338.
4. Archana, A.; Satyanarayana, T. (1997). Enzyme and Microbial Technology, 21, 12-17. (Pubitemid 27334185)
5. Miller, G. L. (1959). Anaytical Chemistry, 31, 426-428.
6. Patel, R. N.; Grabski, A. C.; Jeffries, T. W. (1993). Applied Microbiology and Biotechnology, 39, 405-412.
7. Lambert, C.; Leonard, N.; De Bolle, X.; Depiereux, E. (2002). Bioinformatics, 18, 1250-1256.
8. Gerasimova, J.; Kuisiene, N. (2012). Microbiology, 81, 418-424.
9. Saksono, B.; Sukmarini, L. (2010). HAYATI Journal of Biosciences, 17, 189-197.
10. Canakci, S.; Cevher, Z.; Inan, K.; Tokgoz, M.; Bahar, F.; Kacagan, M.; et al. (2012). World Journal of Microbiology and Biotechnology, 28, 1981-1988.
11. Mamo, G.; Hatti-Kaul, R.; Mattiasson, B. (2007). Extremophiles, 11, 169-177. (Pubitemid 46089640)
12. Guo, B.; Chen, X. L.; Sun, C. Y.; Zhou, B. C.; Zhang, Y. Z. (2009). Applied Microbiology and Biotechnology, 84, 1107-1115.
13. Sinnot, M. L. (1990). Chemical Reviews, 90, 1171-1202.
14. McCarter, J. D.; Withers, S. G. (1994). Current Opinion in Structure Biology, 4, 885-892.
15. Shi, P.; Tian, J.; Yuan, T.; Liu, X.; Huang, H.; et al. (2011). Applied and Environmental Microbiology, 76, 3620-3624.
16. Ko, E. P.; Akatsuka, H.; Moriyama, H.; Shinmyo, A.; Hata, Y.; Kastube, Y.; et al. (1992). Journal of Biochemistry, 288, 117-121.
17. Coughlan, M.; Visser, J. (1992). In J. Visser, G. Beldman, M. A. K. Someren, & A. G. J. Voragen (Eds.), Xylans and xylanases (pp. 111-140). Amsterdam: Elsevier.
18. Paes, G.; Berrin, J. G.; Beaugrand, J. (2012). Advances in Biotechnology, 30, 564-592.
19. Jalal, A.; Rashid, N.; Rasool, N.; Akhtar, M. (2009). Journal of Bioscience and Bioengineering, 107, 360-365.
20. Hyeong, H. L.; Lim, P. O.; Lee, Y. E. (2007). Journal of Microbiology and Biotechnology, 17, 29-36.
21. Son-Ng, I.; Li, C. W.; Yeh, Y.; Chen, P. T.; Chir, J. L.; Ma, C. H.; et al. (2009). Extremophiles, 13, 425-435.
22. Chang, W. S.; Tsai, C. L.; Tseng, M. J. (2004). Biochemical and Biophysical Research Communications, 319, 1017-1025. (Pubitemid 38739421)
23. Cheng, Y. F.; Yang, C. H.; Liu, W. H. (2005). Enzyme and Microbial Technology, 37, 541-546. (Pubitemid 41138186)
24. Gupta, N.; Vohra, R. M.; Hoondal, G. S. (1992). Biotechnology Letters, 14, 1045-1046.
25. Bajaj, B. K.; Razdan, K.; Sharma, A. (2010). Indian Journal of Chemical Technology, 17, 375-380.
26. Zhang, G.; Mao, L.; Zhao, Y.; Xue, Y.; Ma, Y. (2010). Biotechnology Letters, 32, 1915-1920.
27. Khasin, A.; Alchanati, I.; Shoham, Y. (1993). Applied and Environmental Microbiology, 59, 1725-1730.
28. Shrinivas, D.; Savitha, G.; Naik, G. R. (2010). Applied Biochemistry and Biotechnology, 162, 2049-2057.
29. Viikari, L.; Ranua, M.; Kantelinen, A.; Sunduist, J.; Linko, M. (1986). In: Proc 3rd Int Conf Biotechnology in the Pulp and Paper Industry, STFI, Stockholm, Sweden, pp.67-9.
30. Kulkarni, N.; Rao, N. (1996). Journal of Biotechnology, 51, 167-173. (Pubitemid 26375855)
31. Zhang, G. M.; Huang, J.; Huang, G. R.; Ma, L. X.; Zhang, X. E. (2007). Applied Microbiology and Biotechnology, 74, 339-346. (Pubitemid 46204509)
32. Liu, W.; Shi, P.; Chen, Q.; Yang, P.; Wang, G.; Wang, Y.; et al. (2010). Applied Biochemistry and Biotechnology, 162, 1-12.
33. Yin, L.; Lin, H.; Chiang, Y.; Jiang, S. (2010). Journal of Agriculture & Food Chemistry, 58, 557-562.
34. Gupta, S.; Bhushan, B.; Hoondal, G. S. (2000). Journal of Applied Microbiology, 88, 325-334. (Pubitemid 30154436)
35. Kamble, R. D.; Jadhav, A. R. (2012). ISRN Biotechnology, 2013, 1-5.
36. Salama, M. A.; Ismail, K. M. I.; Amany, H. A.; Abo, E.-L.; Genweely, N. S. I. (2008). International Journal of Botany, 4, 41-48.
37. Lu, F.; Lu, M.; Lu, Z.; Bie, X.; Zhao, H.; Wang, Y. (2008). Bioresource Technology, 99, 5938-5941.
38. Cardoso, O. A. V.; Filho, E. X. F. (2003). FEMS Microbiology Letters, 223, 309-314. (Pubitemid 36776341)
39. Wu, S.; Liu, B.; Zhang, X. (2006). Applied Microbiology and Biotechnology, 72, 1210-1216. (Pubitemid 44564456)
40. Do, T. T.; Quyen, D. T. (2010). Middle East Journal of Scientific Research, 6, 392-397.
41. Torronen, A.; Mach, R. L.; Messner, R.; Gonzalez, R.; Kakkinen, N.; Harkki, A.; et al. (1992). Biotechnology (NY), 10, 1461-1465.
42. Khandeparkar, R. D. S.; Bhosle, N. B. (2006). Enzyme and Microbial Technology, 4, 732-742.
43. Gruppen, H.; Hamer, R. J.; Voragen, A. G. J. (1992). Journal of Cereal Science, 16, 53-67.
44. Kormelink, F. J. M.; Voragen, A. G. J. (1993). Applied Microbiology and Biotechnology, 38, 688-695.
45. Jiang, Z. Q.; Deng, W.; Zhu, Y. P.; Li, L. T.; Sheng, Y. J.; Hayashi, K. (2004). Journal of Molecular Catalysis B Enzymatic, 27, 207-213. (Pubitemid 38221108)
46. Ratanakhanokchai, K.; Kyu, K. L.; Tanticharoen, M. (1999). Applied and Environmental Microbiology, 65, 694-697.
47. Damiano, V. B.; Bocchini, D. A.; Gomes, E.; Da Silva, R. (2003). World Journal of Microbiology and Biotechnology, 19, 139-144. (Pubitemid 36543767)
48. Choudhury, B.; Sunita, C.; Singh, S. N.; Ghosh, P. (2006). World Journal of Microbiology and Biotechnology, 22, 283-288.
49. Kaur, A.; Mahajan, R.; Singh, A.; Garg, G.; Sharma, J. (2010). Bioresource Technology, 101, 9150-9155.