-
1
-
-
0020489781
-
Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells
-
PMID:7079182
-
Ehrlich M, Gama-Sosa MA, Huang LH, Midgett RM, Kuo KC, McCune RA, et al. Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells. Nucleic Acids Res 1982; 10:2709-21; PMID:7079182; http://dx.doi.org/10.1093/nar/10.8.2709.
-
(1982)
Nucleic Acids Res
, vol.10
, pp. 2709-2721
-
-
Ehrlich, M.1
Gama-Sosa, M.A.2
Huang, L.H.3
Midgett, R.M.4
Kuo, K.C.5
McCune, R.A.6
-
2
-
-
79959884168
-
Exposing the DNA methylome iceberg
-
PMID:21497094
-
Ndlovu MN, Denis H, Fuks F. Exposing the DNA methylome iceberg. Trends Biochem Sci 2011; 36:381-7; PMID:21497094.
-
(2011)
Trends Biochem Sci
, vol.36
, pp. 381-387
-
-
Ndlovu, M.N.1
Denis, H.2
Fuks, F.3
-
3
-
-
66149123748
-
The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain
-
PMID:19372393
-
Kriaucionis S, Heintz N. The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain. Science 2009; 324:929-30; PMID:19372393; http://dx.doi.org/10.1126/science.1169786.
-
(2009)
Science
, vol.324
, pp. 929-930
-
-
Kriaucionis, S.1
Heintz, N.2
-
4
-
-
79956323623
-
Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation
-
PMID:21460836
-
Ficz G, Branco MR, Seisenberger S, Santos F, Krueger F, Hore TA, et al. Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation. Nature 2011; 473:398-402; PMID:21460836; http://dx.doi.org/10.1038/nature10008.
-
(2011)
Nature
, vol.473
, pp. 398-402
-
-
Ficz, G.1
Branco, M.R.2
Seisenberger, S.3
Santos, F.4
Krueger, F.5
Hore, T.A.6
-
5
-
-
79955538247
-
Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain
-
PMID:21496894
-
Guo JU, Su Y, Zhong C, Ming GL, Song H. Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain. Cell 2011; 145:423-34; PMID:21496894; http://dx.doi.org/10.1016/j.cell.2011.03.022.
-
(2011)
Cell
, vol.145
, pp. 423-434
-
-
Guo, J.U.1
Su, Y.2
Zhong, C.3
Ming, G.L.4
Song, H.5
-
6
-
-
79960249232
-
Genomic mapping of 5-hydroxymethylcytosine in the human brain
-
PMID:21378125
-
Jin SG, Wu X, Li AX, Pfeifer GP. Genomic mapping of 5-hydroxymethylcytosine in the human brain. Nucleic Acids Res 2011; 39:5015-24; PMID:21378125; http://dx.doi.org/10.1093/nar/gkr120.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 5015-5024
-
-
Jin, S.G.1
Wu, X.2
Li, A.X.3
Pfeifer, G.P.4
-
7
-
-
78149430876
-
Molecular coupling of DNA methylation and histone methylation
-
PMID:21339843
-
Hashimoto H, Vertino PM, Cheng X. Molecular coupling of DNA methylation and histone methylation. Epigenomics 2010; 2:657-69; PMID:21339843; http://dx.doi.org/10.2217/epi.10.44.
-
(2010)
Epigenomics
, vol.2
, pp. 657-669
-
-
Hashimoto, H.1
Vertino, P.M.2
Cheng, X.3
-
8
-
-
79961022818
-
Chromosome-wide DNA methylation analysis predicts human tissue-specific X inactivation
-
PMID:21597963
-
Cotton AM, Lam L, Affleck JG, Wilson IM, Peñaherrera MS, McFadden DE, et al. Chromosome-wide DNA methylation analysis predicts human tissue-specific X inactivation. Hum Genet 2011; 130:187-201; PMID:21597963; http://dx.doi.org/10.1007/s00439-011-1007-8.
-
(2011)
Hum Genet
, vol.130
, pp. 187-201
-
-
Cotton, A.M.1
Lam, L.2
Affleck, J.G.3
Wilson, I.M.4
Peñaherrera, M.S.5
McFadden, D.E.6
-
9
-
-
79955564613
-
Extensive epigenetic reprogramming in human somatic tissues between fetus and adult
-
PMID:21545704
-
Yuen RK, Neumann SM, Fok AK, Peñaherrera MS, McFadden DE, Robinson WP, et al. Extensive epigenetic reprogramming in human somatic tissues between fetus and adult. Epigenetics Chromatin 2011; 4:7; PMID:21545704; http://dx.doi.org/10.1186/1756-8935-4-7.
-
(2011)
Epigenetics Chromatin
, vol.4
, pp. 7
-
-
Yuen, R.K.1
Neumann, S.M.2
Fok, A.K.3
Peñaherrera, M.S.4
McFadden, D.E.5
Robinson, W.P.6
-
10
-
-
80053894461
-
DNA methylation profiling of embryonic stem cell differentiation into the three germ layers
-
PMID:22016810
-
Isagawa T, Nagae G, Shiraki N, Fujita T, Sato N, Ishikawa S, et al. DNA methylation profiling of embryonic stem cell differentiation into the three germ layers. PLoS One 2011; 6:e26052; PMID:22016810; http://dx.doi.org/10.1371/journal.pone.0026052.
-
(2011)
PLoS One
, vol.6
-
-
Isagawa, T.1
Nagae, G.2
Shiraki, N.3
Fujita, T.4
Sato, N.5
Ishikawa, S.6
-
11
-
-
84869171494
-
DNA methylation plasticity of human adipose-derived stem cells in lineage commitment
-
PMID:23031258
-
Berdasco M, Melguizo C, Prados J, Gómez A, Alaminos M, Pujana MA, et al. DNA methylation plasticity of human adipose-derived stem cells in lineage commitment. Am J Pathol 2012; 181:2079-93; PMID:23031258; http://dx.doi.org/10.1016/j.ajpath.2012.08.016.
-
(2012)
Am J Pathol
, vol.181
, pp. 2079-2093
-
-
Berdasco, M.1
Melguizo, C.2
Prados, J.3
Gómez, A.4
Alaminos, M.5
Pujana, M.A.6
-
12
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
PMID:18600261
-
Meissner A, Mikkelsen TS, Gu H, Wernig M, Hanna J, Sivachenko A, et al. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature 2008; 454:766-70; PMID:18600261.
-
(2008)
Nature
, vol.454
, pp. 766-770
-
-
Meissner, A.1
Mikkelsen, T.S.2
Gu, H.3
Wernig, M.4
Hanna, J.5
Sivachenko, A.6
-
13
-
-
80053349950
-
Gene expression during normal and FSHD myogenesis
-
PMID:21951698
-
Tsumagari K, Chang SC, Lacey M, Baribault C, Chittur SV, Sowden J, et al. Gene expression during normal and FSHD myogenesis. BMC Med Genomics 2011; 4:67; PMID:21951698; http://dx.doi.org/10.1186/17558794-4-67.
-
(2011)
BMC Med Genomics
, vol.4
, pp. 67
-
-
Tsumagari, K.1
Chang, S.C.2
Lacey, M.3
Baribault, C.4
Chittur, S.V.5
Sowden, J.6
-
14
-
-
78650826181
-
Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates
-
PMID:21203455
-
Globisch D, Münzel M, Müller M, Michalakis S, Wagner M, Koch S, et al. Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates. PLoS One 2010; 5:e15367; PMID:21203455; http://dx.doi.org/10.1371/journal.pone.0015367.
-
(2010)
PLoS One
, vol.5
-
-
Globisch, D.1
Münzel, M.2
Müller, M.3
Michalakis, S.4
Wagner, M.5
Koch, S.6
-
15
-
-
84255200412
-
5-Hydroxymethylcytosine is strongly depleted in human cancers but its levels do not correlate with IDH1 mutations
-
PMID:22052461
-
Jin SG, Jiang Y, Qiu R, Rauch TA, Wang Y, Schackert G, et al. 5-Hydroxymethylcytosine is strongly depleted in human cancers but its levels do not correlate with IDH1 mutations. Cancer Res 2011; 71:7360-5; PMID:22052461; http://dx.doi.org/10.1158/00085472.CAN-11-2023.
-
(2011)
Cancer Res
, vol.71
, pp. 7360-7365
-
-
Jin, S.G.1
Jiang, Y.2
Qiu, R.3
Rauch, T.A.4
Wang, Y.5
Schackert, G.6
-
16
-
-
84863042219
-
Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes
-
PMID:22229759
-
Terragni J, Bitinaite J, Zheng Y, Pradhan S. Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes. Biochemistry 2012; 51:1009-19; PMID:22229759; http://dx.doi.org/10.1021/bi2014739.
-
(2012)
Biochemistry
, vol.51
, pp. 1009-1019
-
-
Terragni, J.1
Bitinaite, J.2
Zheng, Y.3
Pradhan, S.4
-
17
-
-
84887212617
-
Integrated functions of Pax3 and Pax7 in the regulation of proliferation, cell size and myogenic differentiation
-
PMID:19221588
-
Collins CA, Gnocchi VF, White RB, Boldrin L, Perez-Ruiz A, Relaix F, et al. Integrated functions of Pax3 and Pax7 in the regulation of proliferation, cell size and myogenic differentiation. PLoS One 2009; 4:e4475; PMID:19221588; http://dx.doi.org/10.1371/journal.pone.0004475.
-
(2009)
PLoS One
, vol.4
-
-
Collins, C.A.1
Gnocchi, V.F.2
White, R.B.3
Boldrin, L.4
Perez-Ruiz, A.5
Relaix, F.6
-
18
-
-
80051558407
-
Differential PAX3 functions in normal skin melanocytes and melanoma cells
-
PMID:21802410
-
Medic S, Rizos H, Ziman M. Differential PAX3 functions in normal skin melanocytes and melanoma cells. Biochem Biophys Res Commun 2011; 411:832-7; PMID:21802410; http://dx.doi.org/10.1016/j. bbrc.2011.07.053.
-
(2011)
Biochem Biophys Res Commun
, vol.411
, pp. 832-837
-
-
Medic, S.1
Rizos, H.2
Ziman, M.3
-
19
-
-
84861128913
-
Tbx1 is a negative modulator of Mef2c
-
PMID:22367967
-
Pane LS, Zhang Z, Ferrentino R, Huynh T, Cutillo L, Baldini A. Tbx1 is a negative modulator of Mef2c. Hum Mol Genet 2012; 21:2485-96; PMID:22367967; http://dx.doi.org/10.1093/hmg/dds063.
-
(2012)
Hum Mol Genet
, vol.21
, pp. 2485-2496
-
-
Pane, L.S.1
Zhang, Z.2
Ferrentino, R.3
Huynh, T.4
Cutillo, L.5
Baldini, A.6
-
20
-
-
83755228903
-
Detecting 22q11.2 deletion in Chinese children with conotruncal heart defects and single nucleotide polymorphisms in the haploid TBX1 locus
-
PMID:22185286
-
Xu YJ, Wang J, Xu R, Zhao PJ, Wang XK, Sun HJ, et al. Detecting 22q11.2 deletion in Chinese children with conotruncal heart defects and single nucleotide polymorphisms in the haploid TBX1 locus. BMC Med Genet 2011; 12:169; PMID:22185286; http://dx.doi.org/10.1186/1471-2350-12-169.
-
(2011)
BMC Med Genet
, vol.12
, pp. 169
-
-
Xu, Y.J.1
Wang, J.2
Xu, R.3
Zhao, P.J.4
Wang, X.K.5
Sun, H.J.6
-
21
-
-
77950658339
-
Uncoupling of expression of an intronic microRNA and its myosin host gene by exon skipping
-
PMID:20154144
-
Bell ML, Buvoli M, Leinwand LA. Uncoupling of expression of an intronic microRNA and its myosin host gene by exon skipping. Mol Cell Biol 2010; 30:1937-45; PMID:20154144; http://dx.doi.org/10.1128/MCB.01370-09.
-
(2010)
Mol Cell Biol
, vol.30
, pp. 1937-1945
-
-
Bell, M.L.1
Buvoli, M.2
Leinwand, L.A.3
-
22
-
-
79955800181
-
Elevated miR-499 levels blunt the cardiac stress response
-
PMID:21573063
-
Shieh JT, Huang Y, Gilmore J, Srivastava D. Elevated miR-499 levels blunt the cardiac stress response. PLoS One 2011; 6:e19481; PMID:21573063; http://dx.doi.org/10.1371/journal.pone.0019481.
-
(2011)
PLoS One
, vol.6
-
-
Shieh, J.T.1
Huang, Y.2
Gilmore, J.3
Srivastava, D.4
-
23
-
-
70349670977
-
Muscle giants: Molecular scaffolds in sarcomerogenesis
-
PMID:19789381
-
Kontrogianni-Konstantopoulos A, Ackermann MA, Bowman AL, Yap SV, Bloch RJ. Muscle giants: molecular scaffolds in sarcomerogenesis. Physiol Rev 2009; 89:1217-67; PMID:19789381; http://dx.doi.org/10.1152/physrev.00017.2009.
-
(2009)
Physiol Rev
, vol.89
, pp. 1217-1267
-
-
Kontrogianni-Konstantopoulos, A.1
Ackermann, M.A.2
Bowman, A.L.3
Yap, S.V.4
Bloch, R.J.5
-
24
-
-
77957257570
-
CpG island clusters and pro-epigenetic selection for CpGs in protein-coding exons of HOX and other transcription factors
-
PMID:20716685
-
Branciamore S, Chen ZX, Riggs AD, Rodin SN. CpG island clusters and pro-epigenetic selection for CpGs in protein-coding exons of HOX and other transcription factors. Proc Natl Acad Sci U S A 2010; 107:15485-90; PMID:20716685; http://dx.doi.org/10.1073/pnas.1010506107.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 15485-15490
-
-
Branciamore, S.1
Chen, Z.X.2
Riggs, A.D.3
Rodin, S.N.4
-
25
-
-
77952214662
-
GREAT improves functional interpretation of cis-regulatory regions
-
PMID:20436461
-
McLean CY, Bristor D, Hiller M, Clarke SL, Schaar BT, Lowe CB, et al. GREAT improves functional interpretation of cis-regulatory regions. Nat Biotechnol 2010; 28:495-501; PMID:20436461; http://dx.doi.org/10.1038/nbt.1630.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 495-501
-
-
McLean, C.Y.1
Bristor, D.2
Hiller, M.3
Clarke, S.L.4
Schaar, B.T.5
Lowe, C.B.6
-
26
-
-
33846904563
-
Tbx1 regulation of myogenic differentiation in the limb and cranial mesoderm
-
PMID:17117436
-
Dastjerdi A, Robson L, Walker R, Hadley J, Zhang Z, Rodriguez-Niedenführ M, et al. Tbx1 regulation of myogenic differentiation in the limb and cranial mesoderm. Dev Dyn 2007; 236:353-63; PMID:17117436; http://dx.doi.org/10.1002/dvdy.21010.
-
(2007)
Dev Dyn
, vol.236
, pp. 353-363
-
-
Dastjerdi, A.1
Robson, L.2
Walker, R.3
Hadley, J.4
Zhang, Z.5
Rodriguez-Niedenführ, M.6
-
27
-
-
84860780042
-
Sim2 prevents entry into the myogenic program by repressing MyoD transcription during limb embryonic myogenesis
-
PMID:22513369
-
Havis E, Coumailleau P, Bonnet A, Bismuth K, Bonnin MA, Johnson R, et al. Sim2 prevents entry into the myogenic program by repressing MyoD transcription during limb embryonic myogenesis. Development 2012; 139:1910-20; PMID:22513369; http://dx.doi.org/10.1242/dev.072561.
-
(2012)
Development
, vol.139
, pp. 1910-1920
-
-
Havis, E.1
Coumailleau, P.2
Bonnet, A.3
Bismuth, K.4
Bonnin, M.A.5
Johnson, R.6
-
28
-
-
84865679748
-
Deciphering transcription dys-regulation in FSH muscular dystrophy
-
PMID:22718021
-
Ehrlich M, Lacey M. Deciphering transcription dys-regulation in FSH muscular dystrophy. J Hum Genet 2012; 57:477-84; PMID:22718021; http://dx.doi.org/10.1038/jhg.2012.74.
-
(2012)
J Hum Genet
, vol.57
, pp. 477-484
-
-
Ehrlich, M.1
Lacey, M.2
-
29
-
-
80051712275
-
Emerging roles of TET proteins and 5-hydroxymethylcytosines in active DNA demethylation and beyond
-
PMID:21811096
-
Guo JU, Su Y, Zhong C, Ming GL, Song H. Emerging roles of TET proteins and 5-hydroxymethylcytosines in active DNA demethylation and beyond. Cell Cycle 2011; 10:2662-8; PMID:21811096; http://dx.doi.org/10.4161/cc.10.16.17093.
-
(2011)
Cell Cycle
, vol.10
, pp. 2662-2668
-
-
Guo, J.U.1
Su, Y.2
Zhong, C.3
Ming, G.L.4
Song, H.5
-
30
-
-
77951441114
-
Muscle stem cells in developmental and regenerative myogenesis
-
PMID:20098319
-
Kang JS, Krauss RS. Muscle stem cells in developmental and regenerative myogenesis. Curr Opin Clin Nutr Metab Care 2010; 13:243-8; PMID:20098319; http://dx.doi.org/10.1097/MCO.0b013e328336ea98.
-
(2010)
Curr Opin Clin Nutr Metab Care
, vol.13
, pp. 243-248
-
-
Kang, J.S.1
Krauss, R.S.2
-
31
-
-
1342327349
-
Identification of minimal enhancer elements sufficient for Pax3 expression in neural crest and implication of Tead2 as a regulator of Pax3
-
PMID:14736747
-
Milewski RC, Chi NC, Li J, Brown C, Lu MM, Epstein JA. Identification of minimal enhancer elements sufficient for Pax3 expression in neural crest and implication of Tead2 as a regulator of Pax3. Development 2004; 131:829-37; PMID:14736747; http://dx.doi.org/10.1242/dev.00975.
-
(2004)
Development
, vol.131
, pp. 829-837
-
-
Milewski, R.C.1
Chi, N.C.2
Li, J.3
Brown, C.4
Lu, M.M.5
Epstein, J.A.6
-
32
-
-
18544367498
-
Identification of a hypaxial somite enhancer element regulating Pax3 expression in migrating myoblasts and characterization of hypaxial muscle Cre transgenic mice
-
PMID:15789408
-
Brown CB, Engleka KA, Wenning J, Min Lu M, Epstein JA. Identification of a hypaxial somite enhancer element regulating Pax3 expression in migrating myoblasts and characterization of hypaxial muscle Cre transgenic mice. Genesis 2005; 41:202-9; PMID:15789408; http://dx.doi.org/10.1002/gene.20116.
-
(2005)
Genesis
, vol.41
, pp. 202-209
-
-
Brown, C.B.1
Engleka, K.A.2
Wenning, J.3
Min, L.M.4
Epstein, J.A.5
-
33
-
-
76949102298
-
Distinct enhancers at the Pax3 locus can function redundantly to regulate neural tube and neural crest expressions
-
PMID:20045680
-
Degenhardt KR, Milewski RC, Padmanabhan A, Miller M, Singh MK, Lang D, et al. Distinct enhancers at the Pax3 locus can function redundantly to regulate neural tube and neural crest expressions. Dev Biol 2010; 339:519-27; PMID:20045680; http://dx.doi.org/10.1016/j.ydbio.2009.12.030.
-
(2010)
Dev Biol
, vol.339
, pp. 519-527
-
-
Degenhardt, K.R.1
Milewski, R.C.2
Padmanabhan, A.3
Miller, M.4
Singh, M.K.5
Lang, D.6
-
34
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
PMID:20436464
-
Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, et al. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol 2010; 28:511-5; PMID:20436464; http://dx.doi.org/10.1038/nbt.1621.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 511-515
-
-
Trapnell, C.1
Williams, B.A.2
Pertea, G.3
Mortazavi, A.4
Kwan, G.5
van Baren, M.J.6
-
35
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
PMID:18516045
-
Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 2008; 5:621-8; PMID:18516045; http://dx.doi.org/10.1038/nmeth.1226.
-
(2008)
Nat Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
36
-
-
0028147421
-
Isolation of two isoforms of the PAX3 gene transcripts and their tissue-specific alternative expression in human adult tissues
-
PMID:7545913
-
Tsukamoto K, Nakamura Y, Niikawa N. Isolation of two isoforms of the PAX3 gene transcripts and their tissue-specific alternative expression in human adult tissues. Hum Genet 1994; 93:270-4; PMID:7545913; http://dx.doi.org/10.1007/BF00212021.
-
(1994)
Hum Genet
, vol.93
, pp. 270-274
-
-
Tsukamoto, K.1
Nakamura, Y.2
Niikawa, N.3
-
37
-
-
33646429798
-
Gene expression analyses reveal molecular relationships among 20 regions of the human CNS
-
PMID:16572319
-
Roth RB, Hevezi P, Lee J, Willhite D, Lechner SM, Foster AC, et al. Gene expression analyses reveal molecular relationships among 20 regions of the human CNS. Neurogenetics 2006; 7:67-80; PMID:16572319; http://dx.doi.org/10.1007/s10048-006-0032-6.
-
(2006)
Neurogenetics
, vol.7
, pp. 67-80
-
-
Roth, R.B.1
Hevezi, P.2
Lee, J.3
Willhite, D.4
Lechner, S.M.5
Foster, A.C.6
-
38
-
-
76249090489
-
BioGPS: An extensible and customizable portal for querying and organizing gene annotation resources
-
PMID:19919682
-
Wu C, Orozco C, Boyer J, Leglise M, Goodale J, Batalov S, et al. BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources. Genome Biol 2009; 10:R130; PMID:19919682; http://dx.doi.org/10.1186/gb-2009-10-11-r130.
-
(2009)
Genome Biol
, vol.10
-
-
Wu, C.1
Orozco, C.2
Boyer, J.3
Leglise, M.4
Goodale, J.5
Batalov, S.6
-
39
-
-
44649113118
-
DNA methylation profiling of pseudogene-parental gene pairs and two gene families
-
PMID:18450418
-
Cortese R, Krispin M, Weiss G, Berlin K, Eckhardt F. DNA methylation profiling of pseudogene-parental gene pairs and two gene families. Genomics 2008; 91:492-502; PMID:18450418; http://dx.doi.org/10.1016/j.ygeno.2008.02.004.
-
(2008)
Genomics
, vol.91
, pp. 492-502
-
-
Cortese, R.1
Krispin, M.2
Weiss, G.3
Berlin, K.4
Eckhardt, F.5
-
40
-
-
84856120332
-
Understanding the language of Lys36 methylation at histone H3
-
PMID:22266761
-
Wagner EJ, Carpenter PB. Understanding the language of Lys36 methylation at histone H3. Nat Rev Mol Cell Biol 2012; 13:115-26; PMID:22266761; http://dx.doi.org/10.1038/nrm3274.
-
(2012)
Nat Rev Mol Cell Biol
, vol.13
, pp. 115-126
-
-
Wagner, E.J.1
Carpenter, P.B.2
-
41
-
-
38649099445
-
High-resolution mapping and characterization of open chromatin across the genome
-
PMID:18243105
-
Boyle AP, Davis S, Shulha HP, Meltzer P, Margulies EH, Weng Z, et al. High-resolution mapping and characterization of open chromatin across the genome. Cell 2008; 132:311-22; PMID:18243105; http://dx.doi.org/10.1016/j.cell.2007.12.014.
-
(2008)
Cell
, vol.132
, pp. 311-322
-
-
Boyle, A.P.1
Davis, S.2
Shulha, H.P.3
Meltzer, P.4
Margulies, E.H.5
Weng, Z.6
-
42
-
-
33646733029
-
Tbx1 haploinsufficiency is linked to behavioral disorders in mice and humans: Implications for 22q11 deletion syndrome
-
PMID:16684884
-
Paylor R, Glaser B, Mupo A, Ataliotis P, Spencer C, Sobotka A, et al. Tbx1 haploinsufficiency is linked to behavioral disorders in mice and humans: implications for 22q11 deletion syndrome. Proc Natl Acad Sci U S A 2006; 103:7729-34; PMID:16684884; http://dx.doi.org/10.1073/pnas.0600206103.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 7729-7734
-
-
Paylor, R.1
Glaser, B.2
Mupo, A.3
Ataliotis, P.4
Spencer, C.5
Sobotka, A.6
-
43
-
-
67650654610
-
CCCTC-binding factor: To loop or to bridge
-
PMID:19137260
-
Zlatanova J, Caiafa P. CCCTC-binding factor: to loop or to bridge. Cell Mol Life Sci 2009; 66:1647-60; PMID:19137260; http://dx.doi.org/10.1007/s00018009-8647-z.
-
(2009)
Cell Mol Life Sci
, vol.66
, pp. 1647-1660
-
-
Zlatanova, J.1
Caiafa, P.2
-
44
-
-
79955550445
-
ENCODE Project Consortium. A user's guide to the encyclopedia of DNA elements (ENCODE)
-
PMID:21526222
-
Myers RM, Stamatoyannopoulos J, Snyder M, Dunham I, Hardison RC, Bernstein BE, et al.; ENCODE Project Consortium. A user's guide to the encyclopedia of DNA elements (ENCODE). PLoS Biol 2011; 9:e1001046; PMID:21526222; http://dx.doi.org/10.1371/journal.pbio.1001046.
-
(2011)
PLoS Biol
, vol.9
-
-
Myers, R.M.1
Stamatoyannopoulos, J.2
Snyder, M.3
Dunham, I.4
Hardison, R.C.5
Bernstein, B.E.6
-
45
-
-
0037045426
-
Identification, tissue expression and chromosomal localization of human Obscurin-MLCK, a member of the titin and Dbl families of myosin light chain kinases
-
PMID:11814696
-
Russell MW, Raeker MO, Korytkowski KA, Sonneman KJ. Identification, tissue expression and chromosomal localization of human Obscurin-MLCK, a member of the titin and Dbl families of myosin light chain kinases. Gene 2002; 282:237-46; PMID:11814696; http://dx.doi.org/10.1016/S0378-1119(01)00795-8.
-
(2002)
Gene
, vol.282
, pp. 237-246
-
-
Russell, M.W.1
Raeker, M.O.2
Korytkowski, K.A.3
Sonneman, K.J.4
-
46
-
-
79251534990
-
Regulation of synapse structure and function by distinct myosin II motors
-
PMID:21273429
-
Rubio MD, Johnson R, Miller CA, Huganir RL, Rumbaugh G. Regulation of synapse structure and function by distinct myosin II motors. J Neurosci 2011; 31:1448-60; PMID:21273429; http://dx.doi.org/10.1523/JNEUROSCI.3294-10.2011.
-
(2011)
J Neurosci
, vol.31
, pp. 1448-1460
-
-
Rubio, M.D.1
Johnson, R.2
Miller, C.A.3
Huganir, R.L.4
Rumbaugh, G.5
-
47
-
-
71549165765
-
A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance
-
PMID:19922871
-
van Rooij E, Quiat D, Johnson BA, Sutherland LB, Qi X, Richardson JA, et al. A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance. Dev Cell 2009; 17:662-73; PMID:19922871; http://dx.doi.org/10.1016/j.devcel.2009.10.013.
-
(2009)
Dev Cell
, vol.17
, pp. 662-673
-
-
van Rooij, E.1
Quiat, D.2
Johnson, B.A.3
Sutherland, L.B.4
Qi, X.5
Richardson, J.A.6
-
48
-
-
0035833261
-
Obscurin, a giant sarcomeric Rho guanine nucleotide exchange factor protein involved in sarcomere assembly
-
PMID:11448995
-
Young P, Ehler E, Gautel M. Obscurin, a giant sarcomeric Rho guanine nucleotide exchange factor protein involved in sarcomere assembly. J Cell Biol 2001; 154:123-36; PMID:11448995; http://dx.doi.org/10.1083/jcb.200102110.
-
(2001)
J Cell Biol
, vol.154
, pp. 123-136
-
-
Young, P.1
Ehler, E.2
Gautel, M.3
-
49
-
-
83855163995
-
Uncovering the role of 5-hydroxymethylcytosine in the epigenome
-
PMID:22083101
-
Branco MR, Ficz G, Reik W. Uncovering the role of 5-hydroxymethylcytosine in the epigenome. Nat Rev Genet 2012; 13:7-13; PMID:22083101.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 7-13
-
-
Branco, M.R.1
Ficz, G.2
Reik, W.3
-
50
-
-
84862776719
-
Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA
-
PMID:22327402
-
Zhang L, Lu X, Lu J, Liang H, Dai Q, Xu GL, et al. Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA. Nat Chem Biol 2012; 8:328-30; PMID:22327402; http://dx.doi.org/10.1038/nchembio.914.
-
(2012)
Nat Chem Biol
, vol.8
, pp. 328-330
-
-
Zhang, L.1
Lu, X.2
Lu, J.3
Liang, H.4
Dai, Q.5
Xu, G.L.6
-
51
-
-
84859002909
-
Parallel mechanisms of epigenetic reprogramming in the germline
-
PMID:22386917
-
Hackett JA, Zylicz JJ, Surani MA. Parallel mechanisms of epigenetic reprogramming in the germline. Trends Genet 2012; 28:164-74; PMID:22386917; http://dx.doi.org/10.1016/j.tig.2012.01.005.
-
(2012)
Trends Genet
, vol.28
, pp. 164-174
-
-
Hackett, J.A.1
Zylicz, J.J.2
Surani, M.A.3
-
52
-
-
80052495940
-
Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA
-
PMID:21817016
-
He YF, Li BZ, Li Z, Liu P, Wang Y, Tang Q, et al. Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA. Science 2011; 333:1303-7; PMID:21817016; http://dx.doi.org/10.1126/science.1210944.
-
(2011)
Science
, vol.333
, pp. 1303-1307
-
-
He, Y.F.1
Li, B.Z.2
Li, Z.3
Liu, P.4
Wang, Y.5
Tang, Q.6
-
53
-
-
79959937861
-
Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair
-
PMID:21722948
-
Cortellino S, Xu J, Sannai M, Moore R, Caretti E, Cigliano A, et al. Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair. Cell 2011; 146:67-79; PMID:21722948; http://dx.doi.org/10.1016/j. cell.2011.06.020.
-
(2011)
Cell
, vol.146
, pp. 67-79
-
-
Cortellino, S.1
Xu, J.2
Sannai, M.3
Moore, R.4
Caretti, E.5
Cigliano, A.6
-
54
-
-
84865165385
-
AID enzymatic activity is inversely proportional to the size of cytosine C5 orbital cloud
-
PMID:22916236
-
Rangam G, Schmitz KM, Cobb AJ, Petersen-Mahrt SK. AID enzymatic activity is inversely proportional to the size of cytosine C5 orbital cloud. PLoS One 2012; 7:e43279; PMID:22916236; http://dx.doi.org/10.1371/journal.pone.0043279.
-
(2012)
PLoS One
, vol.7
-
-
Rangam, G.1
Schmitz, K.M.2
Cobb, A.J.3
Petersen-Mahrt, S.K.4
-
55
-
-
0037099537
-
LCX, leukemia-associated protein with a CXXC domain, is fused to MLL in acute myeloid leukemia with trilineage dysplasia having t(10;11)(q22;q23)
-
PMID:12124344
-
Ono R, Taki T, Taketani T, Taniwaki M, Kobayashi H, Hayashi Y. LCX, leukemia-associated protein with a CXXC domain, is fused to MLL in acute myeloid leukemia with trilineage dysplasia having t(10;11)(q22;q23). Cancer Res 2002; 62:4075-80; PMID:12124344.
-
(2002)
Cancer Res
, vol.62
, pp. 4075-4080
-
-
Ono, R.1
Taki, T.2
Taketani, T.3
Taniwaki, M.4
Kobayashi, H.5
Hayashi, Y.6
-
56
-
-
46649119290
-
Characterization of Ayu17-449 gene expression and resultant kidney pathology in a knockout mouse model
-
PMID:18288583
-
Tang H, Araki K, Li Z, Yamamura K. Characterization of Ayu17-449 gene expression and resultant kidney pathology in a knockout mouse model. Transgenic Res 2008; 17:599-608; PMID:18288583; http://dx.doi.org/10.1007/s11248-008-9170-y.
-
(2008)
Transgenic Res
, vol.17
, pp. 599-608
-
-
Tang, H.1
Araki, K.2
Li, Z.3
Yamamura, K.4
-
57
-
-
84860221291
-
Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation
-
PMID:22362737
-
Hashimoto H, Liu Y, Upadhyay AK, Chang Y, Howerton SB, Vertino PM, et al. Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation. Nucleic Acids Res 2012; 40:4841-9; PMID:22362737; http://dx.doi.org/10.1093/nar/gks155.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 4841-4849
-
-
Hashimoto, H.1
Liu, Y.2
Upadhyay, A.K.3
Chang, Y.4
Howerton, S.B.5
Vertino, P.M.6
-
58
-
-
0031215021
-
Isolation and characterization of a gene from the DiGeorge chromosomal region homologous to the mouse Tbx1 gene
-
PMID:9268629
-
Chieffo C, Garvey N, Gong W, Roe B, Zhang G, Silver L, et al. Isolation and characterization of a gene from the DiGeorge chromosomal region homologous to the mouse Tbx1 gene. Genomics 1997; 43:267-77; PMID:9268629; http://dx.doi.org/10.1006/geno.1997.4829.
-
(1997)
Genomics
, vol.43
, pp. 267-277
-
-
Chieffo, C.1
Garvey, N.2
Gong, W.3
Roe, B.4
Zhang, G.5
Silver, L.6
-
59
-
-
84864311315
-
Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster
-
PMID:22569366
-
Bocker MT, Tuorto F, Raddatz G, Musch T, Yang FC, Xu M, et al. Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster. Nat Commun 2012; 3:818; PMID:22569366; http://dx.doi.org/10.1038/ncomms1826.
-
(2012)
Nat Commun
, vol.3
, pp. 818
-
-
Bocker, M.T.1
Tuorto, F.2
Raddatz, G.3
Musch, T.4
Yang, F.C.5
Xu, M.6
-
60
-
-
84866936331
-
Dynamic hydroxymethylation of deoxyribonucleic acid marks differentiation-associated enhancers
-
PMID:22730288
-
Sérandour AA, Avner S, Oger F, Bizot M, Percevault F, Lucchetti-Miganeh C, et al. Dynamic hydroxymethylation of deoxyribonucleic acid marks differentiation-associated enhancers. Nucleic Acids Res 2012; 40:8255-65; PMID:22730288; http://dx.doi.org/10.1093/nar/gks595.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 8255-8265
-
-
Sérandour, A.A.1
Avner, S.2
Oger, F.3
Bizot, M.4
Percevault, F.5
Lucchetti-Miganeh, C.6
-
61
-
-
80455176999
-
CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing
-
PMID:21964334
-
Shukla S, Kavak E, Gregory M, Imashimizu M, Shutinoski B, Kashlev M, et al. CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing. Nature 2011; 479:74-9; PMID:21964334; http://dx.doi.org/10.1038/nature10442.
-
(2011)
Nature
, vol.479
, pp. 74-79
-
-
Shukla, S.1
Kavak, E.2
Gregory, M.3
Imashimizu, M.4
Shutinoski, B.5
Kashlev, M.6
-
62
-
-
84867230056
-
5-hmC in the brain is abundant in synaptic genes and shows differences at the exonintron boundary
-
PMID:22961382
-
Khare T, Pai S, Koncevicius K, Pal M, Kriukiene E, Liutkeviciute Z, et al. 5-hmC in the brain is abundant in synaptic genes and shows differences at the exonintron boundary. Nat Struct Mol Biol 2012; 19:1037-43; PMID:22961382; http://dx.doi.org/10.1038/nsmb.2372.
-
(2012)
Nat Struct Mol Biol
, vol.19
, pp. 1037-1043
-
-
Khare, T.1
Pai, S.2
Koncevicius, K.3
Pal, M.4
Kriukiene, E.5
Liutkeviciute, Z.6
-
63
-
-
79955583542
-
Mapping and analysis of chromatin state dynamics in nine human cell types
-
PMID:21441907
-
Ernst J, Kheradpour P, Mikkelsen TS, Shoresh N, Ward LD, Epstein CB, et al. Mapping and analysis of chromatin state dynamics in nine human cell types. Nature 2011; 473:43-9; PMID:21441907; http://dx.doi.org/10.1038/nature09906.
-
(2011)
Nature
, vol.473
, pp. 43-49
-
-
Ernst, J.1
Kheradpour, P.2
Mikkelsen, T.S.3
Shoresh, N.4
Ward, L.D.5
Epstein, C.B.6
-
64
-
-
80054910846
-
H3K4 tri-methylation provides an epigenetic signature of active enhancers
-
PMID:21847099
-
Pekowska A, Benoukraf T, Zacarias-Cabeza J, Belhocine M, Koch F, Holota H, et al. H3K4 tri-methylation provides an epigenetic signature of active enhancers. EMBO J 2011; 30:4198-210; PMID:21847099; http://dx.doi.org/10.1038/emboj.2011.295.
-
(2011)
EMBO J
, vol.30
, pp. 4198-4210
-
-
Pekowska, A.1
Benoukraf, T.2
Zacarias-Cabeza, J.3
Belhocine, M.4
Koch, F.5
Holota, H.6
-
65
-
-
78650967059
-
Manipulation of endogenous regulatory elements and transgenic analyses of the Tbx1 gene
-
PMID:21107579
-
Zhang Z, Baldini A. Manipulation of endogenous regulatory elements and transgenic analyses of the Tbx1 gene. Mamm Genome 2010; 21:556-64; PMID:21107579; http://dx.doi.org/10.1007/s00335010-9304-4.
-
(2010)
Mamm Genome
, vol.21
, pp. 556-564
-
-
Zhang, Z.1
Baldini, A.2
-
66
-
-
84864008154
-
Biallelic expression of Tbx1 protects the embryo from developmental defects caused by increased receptor tyrosine kinase signaling
-
PMID:22674535
-
Simrick S, Szumska D, Gardiner JR, Jones K, Sagar K, Morrow B, et al. Biallelic expression of Tbx1 protects the embryo from developmental defects caused by increased receptor tyrosine kinase signaling. Dev Dyn 2012; 241:1310-24; PMID:22674535; http://dx.doi.org/10.1002/dvdy.23812.
-
(2012)
Dev Dyn
, vol.241
, pp. 1310-1324
-
-
Simrick, S.1
Szumska, D.2
Gardiner, J.R.3
Jones, K.4
Sagar, K.5
Morrow, B.6
-
67
-
-
78649974535
-
Bmp signaling regulates myocardial differentiation from cardiac progenitors through a MicroRNA-mediated mechanism
-
PMID:21145505
-
Wang J, Greene SB, Bonilla-Claudio M, Tao Y, Zhang J, Bai Y, et al. Bmp signaling regulates myocardial differentiation from cardiac progenitors through a MicroRNA-mediated mechanism. Dev Cell 2010; 19:903-12; PMID:21145505; http://dx.doi.org/10.1016/j.devcel.2010.10.022.
-
(2010)
Dev Cell
, vol.19
, pp. 903-912
-
-
Wang, J.1
Greene, S.B.2
Bonilla-Claudio, M.3
Tao, Y.4
Zhang, J.5
Bai, Y.6
-
68
-
-
84861221693
-
Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution
-
PMID:22539555
-
Booth MJ, Branco MR, Ficz G, Oxley D, Krueger F, Reik W, et al. Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution. Science 2012; 336:934-7; PMID:22539555; http://dx.doi.org/10.1126/science.1220671.
-
(2012)
Science
, vol.336
, pp. 934-937
-
-
Booth, M.J.1
Branco, M.R.2
Ficz, G.3
Oxley, D.4
Krueger, F.5
Reik, W.6
-
69
-
-
84867137051
-
Chromatin and epigenetic regulation of pre-mRNA processing
-
PMID:22936691
-
Brown SJ, Stoilov P, Xing Y. Chromatin and epigenetic regulation of pre-mRNA processing. Hum Mol Genet 2012; 21(R1):R90-6; PMID:22936691; http://dx.doi.org/10.1093/hmg/dds353.
-
(2012)
Hum Mol Genet
, vol.21
, Issue.R1
-
-
Brown, S.J.1
Stoilov, P.2
Xing, Y.3
-
70
-
-
77949478323
-
The embryonic genes Dkk3, Hoxd8, Hoxd9 and Tbx1 identify muscle types in a diet-independent and fiber-type unrelated way
-
PMID:20230627
-
de Wilde J, Hulshof MF, Boekschoten MV, de Groot P, Smit E, Mariman EC. The embryonic genes Dkk3, Hoxd8, Hoxd9 and Tbx1 identify muscle types in a diet-independent and fiber-type unrelated way. BMC Genomics 2010; 11:176; PMID:20230627; http://dx.doi.org/10.1186/1471-2164-11-176.
-
(2010)
BMC Genomics
, vol.11
, pp. 176
-
-
de Wilde, J.1
Hulshof, M.F.2
Boekschoten, M.V.3
de Groot, P.4
Smit, E.5
Mariman, E.C.6
-
71
-
-
79959949912
-
Mechanisms of T-box gene function in the developing heart
-
PMID:21498422
-
Greulich F, Rudat C, Kispert A. Mechanisms of T-box gene function in the developing heart. Cardiovasc Res 2011; 91:212-22; PMID:21498422; http://dx.doi.org/10.1093/cvr/cvr112.
-
(2011)
Cardiovasc Res
, vol.91
, pp. 212-222
-
-
Greulich, F.1
Rudat, C.2
Kispert, A.3
-
72
-
-
0028364906
-
MyoD1 promoter autoregulation is mediated by two proximal E-boxes
-
PMID:8036150
-
Zingg JM, Pedraza-Alva G, Jost JP. MyoD1 promoter autoregulation is mediated by two proximal E-boxes. Nucleic Acids Res 1994; 22:2234-41; PMID:8036150; http://dx.doi.org/10.1093/nar/22.12.2234.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 2234-2241
-
-
Zingg, J.M.1
Pedraza-Alva, G.2
Jost, J.P.3
-
73
-
-
77958482239
-
Early demethylation of non-CpG, CpCrich, elements in the myogenin 5'-flanking region: A priming effect on the spreading of active demethylation
-
PMID:20935518
-
Fuso A, Ferraguti G, Grandoni F, Ruggeri R, Scarpa S, Strom R, et al. Early demethylation of non-CpG, CpCrich, elements in the myogenin 5'-flanking region: a priming effect on the spreading of active demethylation. Cell Cycle 2010; 9:3965-76; PMID:20935518; http://dx.doi.org/10.4161/cc.9.19.13193.
-
(2010)
Cell Cycle
, vol.9
, pp. 3965-3976
-
-
Fuso, A.1
Ferraguti, G.2
Grandoni, F.3
Ruggeri, R.4
Scarpa, S.5
Strom, R.6
-
74
-
-
80355129718
-
Epigenetics: DNA demethylation promotes skeletal myotube maturation
-
PMID:21795504
-
Hupkes M, Jonsson MK, Scheenen WJ, van Rotterdam W, Sotoca AM, van Someren EP, et al. Epigenetics: DNA demethylation promotes skeletal myotube maturation. FASEB J 2011; 25:3861-72; PMID:21795504; http://dx.doi.org/10.1096/fj.11-186122.
-
(2011)
FASEB J
, vol.25
, pp. 3861-3872
-
-
Hupkes, M.1
Jonsson, M.K.2
Scheenen, W.J.3
van Rotterdam, W.4
Sotoca, A.M.5
van Someren, E.P.6
-
75
-
-
84858055958
-
Acute exercise remodels promoter methylation in human skeletal muscle
-
PMID:22405075
-
Barrès R, Yan J, Egan B, Treebak JT, Rasmussen M, Fritz T, et al. Acute exercise remodels promoter methylation in human skeletal muscle. Cell Metab 2012; 15:405-11; PMID:22405075; http://dx.doi.org/10.1016/j.cmet.2012.01.001.
-
(2012)
Cell Metab
, vol.15
, pp. 405-411
-
-
Barrès, R.1
Yan, J.2
Egan, B.3
Treebak, J.T.4
Rasmussen, M.5
Fritz, T.6
-
76
-
-
80052306947
-
Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation
-
PMID:21852959
-
Gertz J, Varley KE, Reddy TE, Bowling KM, Pauli F, Parker SL, et al. Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation. PLoS Genet 2011; 7:e1002228; PMID:21852959; http://dx.doi.org/10.1371/journal.pgen.1002228.
-
(2011)
PLoS Genet
, vol.7
-
-
Gertz, J.1
Varley, K.E.2
Reddy, T.E.3
Bowling, K.M.4
Pauli, F.5
Parker, S.L.6
-
77
-
-
84855199947
-
-
R-Development-Core-Team. R, R Foundation for Statistical Computing. Vienna, Austria: ISBN 3-900051-07-0
-
R-Development-Core-Team. R: A language and environment for statistical computing. R Foundation for Statistical Computing. Vienna, Austria: ISBN 3-900051-07-0, 2011.
-
(2011)
A Language and Environment For Statistical Computing
-
-
-
80
-
-
77951770756
-
BEDTools: A flexible suite of utilities for comparing genomic features
-
PMID:20110278
-
Quinlan AR, Hall IM. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 2010; 26:841-2; PMID:20110278; http://dx.doi.org/10.1093/bioinformatics/btq033.
-
(2010)
Bioinformatics
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
81
-
-
80053539409
-
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
-
PMID:21750106
-
Song L, Zhang Z, Grasfeder LL, Boyle AP, Giresi PG, Lee BK, et al. Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity. Genome Res 2011; 21:1757-67; PMID:21750106; http://dx.doi.org/10.1101/gr.121541.111.
-
(2011)
Genome Res
, vol.21
, pp. 1757-1767
-
-
Song, L.1
Zhang, Z.2
Grasfeder, L.L.3
Boyle, A.P.4
Giresi, P.G.5
Lee, B.K.6
-
82
-
-
84864073098
-
Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection
-
PMID:22761590
-
Shibata Y, Sheffield NC, Fedrigo O, Babbitt CC, Wortham M, Tewari AK, et al. Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection. PLoS Genet 2012; 8:e1002789; PMID:22761590; http://dx.doi.org/10.1371/journal.pgen.1002789.
-
(2012)
PLoS Genet
, vol.8
-
-
Shibata, Y.1
Sheffield, N.C.2
Fedrigo, O.3
Babbitt, C.C.4
Wortham, M.5
Tewari, A.K.6
-
83
-
-
84859885816
-
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
-
PMID:22383036
-
Trapnell C, Roberts A, Goff L, Pertea G, Kim D, Kelley DR, et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc 2012; 7:562-78; PMID:22383036; http://dx.doi.org/10.1038/nprot.2012.016.
-
(2012)
Nat Protoc
, vol.7
, pp. 562-578
-
-
Trapnell, C.1
Roberts, A.2
Goff, L.3
Pertea, G.4
Kim, D.5
Kelley, D.R.6
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