A putative transport protein is involved in citrulline excretion and re-uptake during arginine deiminase pathway activity by Lactobacillus sakei

Research in Microbiology

Volumn 164, Issue 3, 2013, Pages 216-225

  Rimaux, Tom ^a   Rivière, Audrey ^a   Hebert, Elvira María ^b   Mozzi, Fernanda ^b   Weckx, Stefan ^a   De Vuyst, Luc ^a   Leroy, Frédéric ^a  

^a VRIJE UNIVERSITEIT BRUSSEL   (Belgium)

^b CENTRO DE REFERENCIA PARA LACTOBACILOS CERELA CONICET   (Argentina)

Author keywords

Arginine deiminase; Citrulline; Lactobacillus sakei; Ornithine

Indexed keywords

ARGININE DEIMINASE; CARRIER PROTEIN; CITRULLINE; ORNITHINE; SPACER DNA;

AMINO ACID URINE LEVEL; ARTICLE; CONTROLLED STUDY; ENERGY RESOURCE; ENZYME ACTIVITY; ESCHERICHIA COLI; GENE EXPRESSION; LACTOBACILLUS SAKEI; NONHUMAN; OPERON; PH; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

ARGININE; BACTERIAL PROTEINS; BIOLOGICAL TRANSPORT, ACTIVE; CARRIER PROTEINS; CITRULLINE; GENE EXPRESSION; GENE EXPRESSION REGULATION, BACTERIAL; GENE KNOCKOUT TECHNIQUES; HYDROGEN-ION CONCENTRATION; HYDROLASES; LACTOBACILLUS; MUTATION; ORNITHINE;

LACTOBACILLUS SAKEI;

EID: 84875376378     PISSN: 09232508     EISSN: 17697123     Source Type: Journal    
DOI: 10.1016/j.resmic.2012.11.004     Document Type: Article

References (42)

1. Ammor S., Rachman C., Chaillou S., Prévost H., Dousset X., Zagorec M., Dufour E., Chevallier I. Phenotypic and genotypic identification of lactic acid bacteria isolated from a small-scale facility producing traditional dry sausages. Food Microbiol. 2005, 22:373-382.
2. Berthier F., Zagorec M., Champomier-Vergès M.C., Ehrlich S.D., Morel-Deville F. Efficient transformation of Lactobacillus sake by electroporation. Microbiology 1996, 142:1273-1279.
3. Chaillou S., Champomier-Vergès M.C., Cornet M., Crutz-Le Coq A.M., Dudez A.M., Martin V., Beaufils S., Darbon-Rongère E., Bossy R., Loux V., Zagorec M. The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K. Nat. Biotechnol. 2005, 23:1527-1533.
4. Champomier-Vergès M.C., Chaillou S., Cornet M., Zagorec M. Lactobacillus sakei: recent developments and future prospects. Res. Microbiol. 2001, 152:839-848.
5. Champomier-Vergès M.C., Zúñiga M., Morel-Deville F., Perez-Martinez G., Zagorec M., Ehrlich S.D. Relationships between arginine degradation, pH and survival in Lactobacillus sakei. FEMS Microbiol. Lett. 1999, 180:297-304.
6. Cunin R., Glansdorff N., Piérard A., Stalon V. Biosynthesis and metabolism of arginine in bacteria. Microbiol. Rev. 1986, 50:314-352.
7. de Man J.D., Rogosa M., Sharpe M.E. A medium for the cultivation of Lactobacilli. J. Appl. Bacteriol. 1960, 23:130-135.
8. Dong Y.Q., Chen Y.Y.M., Burne R.A. Control of expression of the arginine deiminase operon of Streptococcus gordonii by CcpA and Flp. J. Bacteriol. 2004, 186:2511-2514.
9. Fernández M., Zúñiga M. Amino acid catabolic pathways of lactic acid bacteria. Crit. Rev. Microbiol. 2006, 32:155-183.
10. Freiding S., Ehrmann M.A., Vogel R.F. Comparison of different IlvE aminotransferases in Lactobacillus sakei and investigation of their contribution to aroma formation from branched chain amino acids. Food Microbiol. 2011, 29:205-214.
11. Gamper M., Ganter B., Polito M.R., Haas D. RNA processing modulates the expression of the arcDABC operon in Pseudomonas aeruginosa. J. Mol. Biol. 1992, 226:943-957.
12. Gamper M., Zimmermann A., Haas D. Anaerobic regulation of transcription initiation in the arcDABC operon of Pseudomonas aeruginosa. J. Bacteriol. 1991, 173:4742-4750.
13. Guilbaud M., Zagorec M., Chaillou S., Champomier-Vergès M.C. Intraspecies diversity of Lactobacillus sakei response to oxidative stress and variability of strain performance in mixed strains challenges. Food Microbiol. 2011, 29:197-204.
14. Hugas M., Garriga M., Aymerich T., Monfort J.M. Biochemical characterization of lactobacilli from dry fermented sausages. Int. J. Food Microbiol. 1993, 18:107-113.
15. Janssens M., Myter N., De Vuyst L., Leroy F. Species diversity and metabolic impact of the microbiota are low in spontaneously acidified Belgian sausages with an added starter culture of Staphylococcus carnosus. Food Microbiol. 2011, 29:167-177.
16. Law J., Buist G., Haandrikman A., Kok J., Venema G., Leenhouts K. A system to generate chromosomal mutations in Lactococcus lactis which allows fast analysis of targeted genes. J. Bacteriol. 1995, 177:7011-7018.
17. Leenhouts K., Buist G., Bolhuis A., tenBerge A., Kiel J., Mierau I., Dabrowska M., Venema G., Kok J. A general system for generating unlabelled gene replacements in bacterial chromosomes. Mol. Gen. Genet. 1996, 253:217-224.
18. Leroy F., Verluyten J., De Vuyst L. Functional meat starter cultures for improved sausage fermentation. Int. J. Food Microbiol. 2006, 106:270-285.
19. Liu S.Q., Pilone G.J. Arginine metabolism in wine lactic acid bacteria and its practical significance. J. Appl. Microbiol. 1998, 84:315-327.
20. Liu S.Q., Pritchard G.G., Hardman M.J., Pilone G.J. Arginine catabolism in wine lactic acid bacteria: is it via the arginine deiminase pathway or the arginase-urease pathway?. J. Appl. Bacteriol. 1996, 81:486-492.
21. Liu Y., Dong Y., Chen Y.Y.M., Burne R.A. Environmental and growth phase regulation of the Streptococcus gordonii arginine deiminase genes. Appl. Environ. Microbiol. 2008, 74:5023-5030.
22. Maguin E., Duwat P., Hege T., Ehrlich D., Gruss A. New thermosensitive plasmid for Gram-positive bacteria. J. Bacteriol. 1992, 174:5633-5638.
23. McLeod A., Snipen L., Naterstad K., Axelsson L. Global transcriptome response in Lactobacillus sakei during growth on ribose. BMC Microbiol. 2011, 11:E145.
24. McLeod A., Zagorec M., Champomier-Vergès M.C., Naterstad K., Axelsson L. Primary metabolism in Lactobacillus sakei food isolates by proteomic analysis. BMC Microbiol. 2010, 10:E120.
25. Mira de Orduña R., Liu S.Q., Patchett M.L., Pilone G.J. Ethyl carbamate precursor citrulline formation from arginine degradation by malolactic wine lactic acid bacteria. FEMS Microbiol. Lett. 2000, 183:31-35.
26. Peirson S.N., Butler J.N., Foster R.G. Experimental validation of novel and conventional approaches to quantitative real-time PCR data analysis. Nucleic Acids Res. 2003, 31:14.
27. Ravyts F., Barbuti S., Frustoli M.A., Parolari G., Saccani G., De Vuyst L., Leroy F. Competitiveness and antibacterial potential of bacteriocin-producing starter cultures in different types of fermented sausages. J. Food Prot. 2008, 71:1817-1827.
28. Ravyts F., De Vuyst L. Prevalence and impact of single-strain starter cultures of lactic acid bacteria on metabolite formation in sourdough. Food Microbiol. 2011, 28:1129-1139.
29. Rimaux T., Rivière A., Illeghems K., Weckx S., De Vuyst L., Leroy F. Expression of the arginine deiminase pathway genes in Lactobacillus sakei is strain-dependent and is affected by environmental pH. Appl. Environ. Microbiol. 2012, 78:4874-4883.
30. Rimaux T., Vrancken G., Pothakos V., Maes D., De Vuyst L., Leroy F. The kinetics of the arginine deiminase pathway in the meat starter culture Lactobacillus sakei CTC 494 are pH-dependent. Food Microbiol. 2011, 28:597-604.
31. Rimaux T., Vrancken G., Vuylsteke B., De Vuyst L., Leroy F. The pentose moiety of adenosine and inosine is an important energy source for the fermented-meat starter culture Lactobacillus sakei CTC 494. Appl. Environ. Microbiol. 2011, 77:6539-6550.
32. Russell W.M., Klaenhammer T.R. Efficient system for directed integration into the Lactobacillus acidophilus and Lactobacillus gasseri chromosomes via homologous recombination. Appl. Environ. Microbiol. 2001, 67:4361-4364.
33. Sambrook J., Russell D.W. Plasmids and their usefulness in molecular cloning. Molecular Cloning. A Laboratory Manual 2001, vol. 1:1-162. Cold Spring Harbor Laboratory Press, New York, USA.
34. Schillinger U., Lücke F.K. Antibacterial activity of Lactobacillus sake isolated from meat. Appl. Environ. Microbiol. 1989, 55:1901-1906.
35. Talon R., Leroy S., Lebert I. Microbial ecosystems of traditional fermented meat products: the importance of indigenous starters. Meat Sci. 2007, 77:55-62.
36. Tettelin H., Nelson K.E., Paulsen I.T., Eisen J.A., Read T.D., Peterson S., Heidelberg J., DeBoy R.T. Complete genome sequence of a virulent isolate of Streptococcus pneumoniae. Science 2001, 293:498-506.
37. Vrancken G., Rimaux T., De Vuyst L., Leroy F. Kinetic analysis of growth and sugar consumption by Lactobacillus fermentum IMDO 130101 reveals adaptation to the acidic sourdough ecosystem. Int. J. Food Microbiol. 2008, 128:58-66.
38. Vrancken G., Rimaux T., Weckx S., De Vuyst L., Leroy F. Environmental pH determines citrulline and ornithine release through the arginine deiminase pathway in Lactobacillus fermentum IMDO 130101. Int. J. Food Microbiol. 2009, 135:216-222.
39. Vrancken G., Rimaux T., Wouters D., Leroy F., De Vuyst L. The arginine deiminase pathway of Lactobacillus fermentum IMDO 130101 responds to growth under stress conditions of both temperature and salt. Food Microbiol. 2009, 26:720-727.
40. Weckx S., De Rijk P., Van Broeckhoven C., Del-Favero J. SNPbox: web-based high-throughput primer design from gene to genome. Nucleic Acids Res. 2004, 32:W170-W172.
41. Zúñiga M., Champomier-Verges M.C., Zagorec M., Perez-Martinez G. Structural and functional analysis of the gene cluster encoding the enzymes of the arginine deiminase pathway of Lactobacillus sake. J. Bacteriol. 1998, 180:4154-4159.
42. Zúñiga M., Miralles M.C., Pérez-Martínez G. The product of arcR, the sixth gene of the arc operon of Lactobacillus sakei, is essential for expression of the arginine deiminase pathway. Appl. Environ. Microbiol. 2002, 68:6051-6058.