-
1
-
-
0037360437
-
Fed-batch cultivation of Saccharomyces cerevisiae in a hyperbaric bioreactor
-
10.1021/bp0257067, 12675615
-
Belo I, Pinheiro R, Mota M. Fed-batch cultivation of Saccharomyces cerevisiae in a hyperbaric bioreactor. Biotechnol Prog 2003, 19:665-671. 10.1021/bp0257067, 12675615.
-
(2003)
Biotechnol Prog
, vol.19
, pp. 665-671
-
-
Belo, I.1
Pinheiro, R.2
Mota, M.3
-
2
-
-
83455218132
-
Putting cells under pressure: A simple and efficient way to enhance the productivity of medium-chain-length polyhydroxyalkanoate in processes with Pseudomonas putida KT2440
-
10.1002/bit.23312, 21858788
-
Follonier S, Henes B, Panke S, Zinn M. Putting cells under pressure: A simple and efficient way to enhance the productivity of medium-chain-length polyhydroxyalkanoate in processes with Pseudomonas putida KT2440. Biotechnol Bioeng 2012, 109:451-461. 10.1002/bit.23312, 21858788.
-
(2012)
Biotechnol Bioeng
, vol.109
, pp. 451-461
-
-
Follonier, S.1
Henes, B.2
Panke, S.3
Zinn, M.4
-
3
-
-
77955414855
-
Online determination of viable biomass up to very high cell densities in Arxula adeninivorans fermentations using an impedance signal
-
10.1016/j.jbiotec.2010.06.007, 20599575
-
Knabben I, Regestein L, Grumbach C, Steinbusch S, Kunze G, Büchs J. Online determination of viable biomass up to very high cell densities in Arxula adeninivorans fermentations using an impedance signal. J Biotechnol 2010, 149:60-66. 10.1016/j.jbiotec.2010.06.007, 20599575.
-
(2010)
J Biotechnol
, vol.149
, pp. 60-66
-
-
Knabben, I.1
Regestein, L.2
Grumbach, C.3
Steinbusch, S.4
Kunze, G.5
Büchs, J.6
-
4
-
-
77957336872
-
High cell-density processes in batch mode of a genetically engineered Escherichia coli strain with minimized overflow metabolism using a pressurized bioreactor
-
Knabben I, Regestein L, Marquering F, Steinbusch S, Lara AR, Büchs J. High cell-density processes in batch mode of a genetically engineered Escherichia coli strain with minimized overflow metabolism using a pressurized bioreactor. J Biotechnol 2010, 150:73-79.
-
(2010)
J Biotechnol
, vol.150
, pp. 73-79
-
-
Knabben, I.1
Regestein, L.2
Marquering, F.3
Steinbusch, S.4
Lara, A.R.5
Büchs, J.6
-
5
-
-
35348962693
-
High cell density cultivation of recombinant yeasts and bacteria under non-pressurized and pressurized conditions in stirred tank bioreactors
-
10.1016/j.jbiotec.2007.06.010, 17681630
-
Knoll A, Bartsch S, Husemann B, Engel P, Schroer K, Ribeiro B. High cell density cultivation of recombinant yeasts and bacteria under non-pressurized and pressurized conditions in stirred tank bioreactors. J Biotechnol 2007, 132:167-179. 10.1016/j.jbiotec.2007.06.010, 17681630.
-
(2007)
J Biotechnol
, vol.132
, pp. 167-179
-
-
Knoll, A.1
Bartsch, S.2
Husemann, B.3
Engel, P.4
Schroer, K.5
Ribeiro, B.6
-
6
-
-
38349154899
-
Yarrowia lipolytica lipase production enhanced by increased air pressure
-
Lopes M, Gomes N, Gonçalves C, Coelho MAZ, Mota M, Belo I. Yarrowia lipolytica lipase production enhanced by increased air pressure. Lett Appl Microbiol 2008, 46:255-260.
-
(2008)
Lett Appl Microbiol
, vol.46
, pp. 255-260
-
-
Lopes, M.1
Gomes, N.2
Gonçalves, C.3
Coelho, M.A.Z.4
Mota, M.5
Belo, I.6
-
7
-
-
70350571906
-
Yarrowia lipolytica growth under increased air pressure: Influence on enzyme production
-
10.1007/s12010-008-8359-0, 18807214
-
Lopes M, Gomes N, Mota M, Belo I. Yarrowia lipolytica growth under increased air pressure: Influence on enzyme production. Appl Biochem Biotechnol 2009, 159:46-53. 10.1007/s12010-008-8359-0, 18807214.
-
(2009)
Appl Biochem Biotechnol
, vol.159
, pp. 46-53
-
-
Lopes, M.1
Gomes, N.2
Mota, M.3
Belo, I.4
-
8
-
-
77954670742
-
Oxygen transfer rate control in the production of human-like collagen by recombinant Escherichia coli
-
10.1042/BA20090314, 20132095
-
Ma X, Fan D, Shang L, Cai Q, Chi L, Zhu C. Oxygen transfer rate control in the production of human-like collagen by recombinant Escherichia coli. Biotechnol Appl Biochem 2010, 55:169-174. 10.1042/BA20090314, 20132095.
-
(2010)
Biotechnol Appl Biochem
, vol.55
, pp. 169-174
-
-
Ma, X.1
Fan, D.2
Shang, L.3
Cai, Q.4
Chi, L.5
Zhu, C.6
-
9
-
-
0034212494
-
Air pressure effects on biomass yield of two different Kluyveromyces strains
-
10.1016/S0141-0229(00)00168-X, 10862882
-
Pinheiro R, Belo I, Mota M. Air pressure effects on biomass yield of two different Kluyveromyces strains. Enzyme Microb Technol 2000, 26:756-762. 10.1016/S0141-0229(00)00168-X, 10862882.
-
(2000)
Enzyme Microb Technol
, vol.26
, pp. 756-762
-
-
Pinheiro, R.1
Belo, I.2
Mota, M.3
-
10
-
-
0026864192
-
Oxygen mass transfer enhancement via fermentor headspace pressurization
-
10.1021/bp00015a010, 1368260
-
Yang JD, Wang NS. Oxygen mass transfer enhancement via fermentor headspace pressurization. Biotechnol Prog 1992, 8:244-251. 10.1021/bp00015a010, 1368260.
-
(1992)
Biotechnol Prog
, vol.8
, pp. 244-251
-
-
Yang, J.D.1
Wang, N.S.2
-
11
-
-
69249092516
-
A microbial polyhydroxyalkanoates (PHA) based bio- and materials industry
-
10.1039/b812677c, 19623359
-
Chen GQ. A microbial polyhydroxyalkanoates (PHA) based bio- and materials industry. Chem Soc Rev 2009, 38:2434-2446. 10.1039/b812677c, 19623359.
-
(2009)
Chem Soc Rev
, vol.38
, pp. 2434-2446
-
-
Chen, G.Q.1
-
12
-
-
79952489524
-
Medium chain length polyhydroxyalkanoates, promising new biomedical materials for the future
-
Rai R, Keshavarz T, Roether JA, Boccaccini AR, Roy I. Medium chain length polyhydroxyalkanoates, promising new biomedical materials for the future. Mater Sci Eng R 2011, 72:29-47.
-
(2011)
Mater Sci Eng R
, vol.72
, pp. 29-47
-
-
Rai, R.1
Keshavarz, T.2
Roether, J.A.3
Boccaccini, A.R.4
Roy, I.5
-
13
-
-
0035803751
-
Occurrence, synthesis and medical application of bacterial polyhydroxyalkanoate
-
10.1016/S0169-409X(01)00218-6, 11733115
-
Zinn M, Witholt B, Egli T. Occurrence, synthesis and medical application of bacterial polyhydroxyalkanoate. Adv Drug Deliv Rev 2001, 53:5-21. 10.1016/S0169-409X(01)00218-6, 11733115.
-
(2001)
Adv Drug Deliv Rev
, vol.53
, pp. 5-21
-
-
Zinn, M.1
Witholt, B.2
Egli, T.3
-
14
-
-
79955945455
-
Growth of Pseudomonas putida at low temperature: global transcriptomic and proteomic analyses
-
Fonseca P, Moreno R, Rojo F. Growth of Pseudomonas putida at low temperature: global transcriptomic and proteomic analyses. Environ Microbiol Rep 2011, 3:329-339.
-
(2011)
Environ Microbiol Rep
, vol.3
, pp. 329-339
-
-
Fonseca, P.1
Moreno, R.2
Rojo, F.3
-
15
-
-
84856158988
-
Transcriptome dynamics of Pseudomonas putida KT2440 under water stress
-
Gülez G, Dechesne A, Workman CT, Smets BF. Transcriptome dynamics of Pseudomonas putida KT2440 under water stress. Appl Environ Microb 2012, 78:676-683.
-
(2012)
Appl Environ Microb
, vol.78
, pp. 676-683
-
-
Gülez, G.1
Dechesne, A.2
Workman, C.T.3
Smets, B.F.4
-
16
-
-
33744752451
-
Functional genomics of stress response in Pseudomonas putida KT2440
-
10.1128/JB.00101-06, 1482902, 16707699
-
Reva ON, Weinel C, Weinel M, Bohm K, Stjepandic D, Hoheisel JD. Functional genomics of stress response in Pseudomonas putida KT2440. J Bacteriol 2006, 188:4079-4092. 10.1128/JB.00101-06, 1482902, 16707699.
-
(2006)
J Bacteriol
, vol.188
, pp. 4079-4092
-
-
Reva, O.N.1
Weinel, C.2
Weinel, M.3
Bohm, K.4
Stjepandic, D.5
Hoheisel, J.D.6
-
17
-
-
0026956057
-
Microbial life at high-pressures
-
Bartlett DH. Microbial life at high-pressures. Sci Prog 1992, 76:479-496.
-
(1992)
Sci Prog
, vol.76
, pp. 479-496
-
-
Bartlett, D.H.1
-
18
-
-
0000486688
-
The influence of hydrostatic pressure on the growth and viability of terrestrial and marine bacteria
-
385493, 16561663
-
ZoBell CE, Johnson FH. The influence of hydrostatic pressure on the growth and viability of terrestrial and marine bacteria. J Bacteriol 1949, 57:179-189. 385493, 16561663.
-
(1949)
J Bacteriol
, vol.57
, pp. 179-189
-
-
ZoBell, C.E.1
Johnson, F.H.2
-
19
-
-
0011002047
-
Review: High-pressure, microbial inactivation and food preservation
-
Cheftel JC. Review: High-pressure, microbial inactivation and food preservation. Food Sci Technol Int 1995, 1:75-90.
-
(1995)
Food Sci Technol Int
, vol.1
, pp. 75-90
-
-
Cheftel, J.C.1
-
20
-
-
70049117912
-
Inactivation of Staphylococcus aureus in calcium phosphate biomaterials via isostatic compression
-
Brouillet M, Gautier H, Miègeville AF, Bouler JM, Merle C, Caillon J. Inactivation of Staphylococcus aureus in calcium phosphate biomaterials via isostatic compression. J Biomed Mater Res B Appl Biomater 2009, 91B:348-353.
-
(2009)
J Biomed Mater Res B Appl Biomater
, vol.91 B
, pp. 348-353
-
-
Brouillet, M.1
Gautier, H.2
Miègeville, A.F.3
Bouler, J.M.4
Merle, C.5
Caillon, J.6
-
21
-
-
32144452320
-
Effect of high hydrostatic pressure on biological properties of extracellular bone matrix proteins
-
Diehl P, Schmitt M, Schauwecker J, Eichelberg K, Gollwitzer H, Gradinger R. Effect of high hydrostatic pressure on biological properties of extracellular bone matrix proteins. Int J Mol Med 2005, 16:285-289.
-
(2005)
Int J Mol Med
, vol.16
, pp. 285-289
-
-
Diehl, P.1
Schmitt, M.2
Schauwecker, J.3
Eichelberg, K.4
Gollwitzer, H.5
Gradinger, R.6
-
22
-
-
33746732187
-
Biomechanical and immunohistochemical analysis of high hydrostatic pressure-treated Achilles tendons
-
10.1007/s00776-006-1031-z, 16897203
-
Diehl P, Steinhauser E, Gollwitzer H, Heister C, Schauwecker J, Milz S. Biomechanical and immunohistochemical analysis of high hydrostatic pressure-treated Achilles tendons. J Orthop Sci 2006, 11:380-385. 10.1007/s00776-006-1031-z, 16897203.
-
(2006)
J Orthop Sci
, vol.11
, pp. 380-385
-
-
Diehl, P.1
Steinhauser, E.2
Gollwitzer, H.3
Heister, C.4
Schauwecker, J.5
Milz, S.6
-
23
-
-
58149236904
-
High hydrostatic pressure, a novel approach in orthopedic surgical oncology to disinfect bone, tendons and cartilage
-
Diehl P, Schauwecker J, Mittelmeier W, Schmitt M. High hydrostatic pressure, a novel approach in orthopedic surgical oncology to disinfect bone, tendons and cartilage. Anticancer Res 2008, 28:3877-3883.
-
(2008)
Anticancer Res
, vol.28
, pp. 3877-3883
-
-
Diehl, P.1
Schauwecker, J.2
Mittelmeier, W.3
Schmitt, M.4
-
24
-
-
85056061855
-
High hydrostatic pressure for disinfection of bone grafts and biomaterials: An experimental study
-
10.2174/1874325000903010001, 2687106, 19516918
-
Gollwitzer H, Mittelmeier W, Brendle M, Weber P, Miethke T, Hofmann GO. High hydrostatic pressure for disinfection of bone grafts and biomaterials: An experimental study. Open Orthop J 2009, 3:1-7. 10.2174/1874325000903010001, 2687106, 19516918.
-
(2009)
Open Orthop J
, vol.3
, pp. 1-7
-
-
Gollwitzer, H.1
Mittelmeier, W.2
Brendle, M.3
Weber, P.4
Miethke, T.5
Hofmann, G.O.6
-
25
-
-
52449108106
-
Biomechanical and immunohistochemical properties of meniscal cartilage after high hydrostatic pressure treatment
-
Naal FD, Schauwecker J, Steinhauser E, Milz S, von Knoch F, Mittelmeier W. Biomechanical and immunohistochemical properties of meniscal cartilage after high hydrostatic pressure treatment. J Biome 2008, 87B:19-25.
-
(2008)
J Biome
, vol.87 B
, pp. 19-25
-
-
Naal, F.D.1
Schauwecker, J.2
Steinhauser, E.3
Milz, S.4
von Knoch, F.5
Mittelmeier, W.6
-
27
-
-
74549140572
-
Inactivation of Escherichia coli by high pressure
-
Washington DC: ASM Press, Michiels C, Bartlett DH, Aertsen A
-
Mackey B, Mañas P. Inactivation of Escherichia coli by high pressure. High-pressure microbiology 2008, 53-85. Washington DC: ASM Press, Michiels C, Bartlett DH, Aertsen A.
-
(2008)
High-pressure microbiology
, pp. 53-85
-
-
Mackey, B.1
Mañas, P.2
-
28
-
-
0033929213
-
Relationship between membrane damage and cell death in pressure-treated Escherichia coli cells: differences between exponential- and stationary-phase cells and variation among strains
-
Pagán R, Mackey B. Relationship between membrane damage and cell death in pressure-treated Escherichia coli cells: differences between exponential- and stationary-phase cells and variation among strains. Appl Environ Microb 2000, 66:2829-2834.
-
(2000)
Appl Environ Microb
, vol.66
, pp. 2829-2834
-
-
Pagán, R.1
Mackey, B.2
-
29
-
-
78651156892
-
Filament formation by Escherichia coli at increased hydrostatic pressures
-
277075, 14129671
-
ZoBell CE, Cobet AB. Filament formation by Escherichia coli at increased hydrostatic pressures. J Bacteriol 1964, 87:710-719. 277075, 14129671.
-
(1964)
J Bacteriol
, vol.87
, pp. 710-719
-
-
ZoBell, C.E.1
Cobet, A.B.2
-
30
-
-
0015759728
-
Loss of bacterial motility under pressure
-
10.1038/246525a0, 4586891
-
Meganathan R, Marquis RE. Loss of bacterial motility under pressure. Nature 1973, 246:525-527. 10.1038/246525a0, 4586891.
-
(1973)
Nature
, vol.246
, pp. 525-527
-
-
Meganathan, R.1
Marquis, R.E.2
-
31
-
-
0021929837
-
Adaptation of the membrane lipids of a deep-sea bacterium to changes in hydrostatic pressure
-
10.1126/science.3992247, 3992247
-
DeLong EF, Yayanos AA. Adaptation of the membrane lipids of a deep-sea bacterium to changes in hydrostatic pressure. Science 1985, 228:1101-1103. 10.1126/science.3992247, 3992247.
-
(1985)
Science
, vol.228
, pp. 1101-1103
-
-
DeLong, E.F.1
Yayanos, A.A.2
-
32
-
-
0024981678
-
Isolation of a gene regulated by hydrostatic pressure in a deep-sea bacterium
-
10.1038/342572a0, 2479840
-
Bartlett D, Wright M, Yayanos AA, Silverman M. Isolation of a gene regulated by hydrostatic pressure in a deep-sea bacterium. Nature 1989, 342:572-574. 10.1038/342572a0, 2479840.
-
(1989)
Nature
, vol.342
, pp. 572-574
-
-
Bartlett, D.1
Wright, M.2
Yayanos, A.A.3
Silverman, M.4
-
33
-
-
0029762245
-
Isolation and characterization of the structural gene for OmpL, a pressure-regulated porin-like protein from the deep-sea bacterium Photobacterium species strain SS9
-
178291, 8759872
-
Welch TJ, Bartlett DH. Isolation and characterization of the structural gene for OmpL, a pressure-regulated porin-like protein from the deep-sea bacterium Photobacterium species strain SS9. J Bacteriol 1996, 178:5027-5031. 178291, 8759872.
-
(1996)
J Bacteriol
, vol.178
, pp. 5027-5031
-
-
Welch, T.J.1
Bartlett, D.H.2
-
34
-
-
14644414887
-
Analysis of hydrostatic pressure effects on transcription in Escherichia coli by DNA microarray procedure
-
10.1007/s00792-004-0414-3, 15340867
-
Ishii A, Oshima T, Sato T, Nakasone K, Mori H, Kato C. Analysis of hydrostatic pressure effects on transcription in Escherichia coli by DNA microarray procedure. Extremophiles 2005, 9:65-73. 10.1007/s00792-004-0414-3, 15340867.
-
(2005)
Extremophiles
, vol.9
, pp. 65-73
-
-
Ishii, A.1
Oshima, T.2
Sato, T.3
Nakasone, K.4
Mori, H.5
Kato, C.6
-
35
-
-
0032076778
-
Purification of a ccb-type quinol oxidase specifically induced in a deep-sea barophilic bacterium, Shewanella sp. strain DB-172 F
-
10.1007/s007920050047, 9672683
-
Qureshi MH, Kato C, Horikoshi K. Purification of a ccb-type quinol oxidase specifically induced in a deep-sea barophilic bacterium, Shewanella sp. strain DB-172 F. Extremophiles 1998, 2:93-99. 10.1007/s007920050047, 9672683.
-
(1998)
Extremophiles
, vol.2
, pp. 93-99
-
-
Qureshi, M.H.1
Kato, C.2
Horikoshi, K.3
-
36
-
-
4444274584
-
An SOS response induced by high pressure in Escherichia coli
-
10.1128/JB.186.18.6133-6141.2004, 515162, 15342583
-
Aertsen A, Van Houdt R, Vanoirbeek K, Michiels CW. An SOS response induced by high pressure in Escherichia coli. J Bacteriol 2004, 186:6133-6141. 10.1128/JB.186.18.6133-6141.2004, 515162, 15342583.
-
(2004)
J Bacteriol
, vol.186
, pp. 6133-6141
-
-
Aertsen, A.1
Van Houdt, R.2
Vanoirbeek, K.3
Michiels, C.W.4
-
37
-
-
75549090212
-
The comprehensive microbial resource
-
10.1093/nar/gkp912, 2808947, 19892825
-
Davidsen T, Beck E, Ganapathy A, Montgomery R, Zafar N, Yang Q. The comprehensive microbial resource. Nucl Acids Res 2010, 38:D340-D345. 10.1093/nar/gkp912, 2808947, 19892825.
-
(2010)
Nucl Acids Res
, vol.38
-
-
Davidsen, T.1
Beck, E.2
Ganapathy, A.3
Montgomery, R.4
Zafar, N.5
Yang, Q.6
-
38
-
-
34548356914
-
Aer on the inside looking out: paradigm for a PAS-HAMP role in sensing oxygen, redox and energy
-
10.1111/j.1365-2958.2007.05889.x, 2586974, 17824925
-
Taylor BL. Aer on the inside looking out: paradigm for a PAS-HAMP role in sensing oxygen, redox and energy. Mol Microbiol 2007, 65:1415-1424. 10.1111/j.1365-2958.2007.05889.x, 2586974, 17824925.
-
(2007)
Mol Microbiol
, vol.65
, pp. 1415-1424
-
-
Taylor, B.L.1
-
39
-
-
41849099231
-
Metabolism-dependent taxis towards (methyl)phenols is coupled through the most abundant of three polar localized Aer-like proteins of Pseudomonas putida
-
10.1111/j.1462-2920.2007.01546.x, 18279347
-
Sarand I, Österberg S, Holmqvist S, Holmfeldt P, Skärfstad E, Parales RE. Metabolism-dependent taxis towards (methyl)phenols is coupled through the most abundant of three polar localized Aer-like proteins of Pseudomonas putida. Environ Microbiol 2008, 10:1320-1334. 10.1111/j.1462-2920.2007.01546.x, 18279347.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1320-1334
-
-
Sarand, I.1
Österberg, S.2
Holmqvist, S.3
Holmfeldt, P.4
Skärfstad, E.5
Parales, R.E.6
-
40
-
-
10444253273
-
Stress responses and genetic variation in bacteria
-
Foster PL. Stress responses and genetic variation in bacteria. Mutat Res Fund Mol Mech Mutagen 2005, 569:3-11.
-
(2005)
Mutat Res Fund Mol Mech Mutagen
, vol.569
, pp. 3-11
-
-
Foster, P.L.1
-
41
-
-
2442670737
-
Heat shock protein-mediated resistance to high hydrostatic pressure in Escherichia coli
-
Aertsen A, Vanoirbeek K, De Spiegeleer P, Sermon J, Hauben K, Farewell A. Heat shock protein-mediated resistance to high hydrostatic pressure in Escherichia coli. Appl Environ Microb 2004, 70:2660-2666.
-
(2004)
Appl Environ Microb
, vol.70
, pp. 2660-2666
-
-
Aertsen, A.1
Vanoirbeek, K.2
De Spiegeleer, P.3
Sermon, J.4
Hauben, K.5
Farewell, A.6
-
42
-
-
0028592676
-
Response of bacteria and fungi to high-pressure stress as investigated by two-dimensional polyacrylamide gel electrophoresis
-
10.1002/elps.11501501224, 7720693
-
Groß M, Kosmowsky IJ, Lorenz R, Molitoris HP, Jaenicke R. Response of bacteria and fungi to high-pressure stress as investigated by two-dimensional polyacrylamide gel electrophoresis. Electrophoresis 1994, 15:1559-1565. 10.1002/elps.11501501224, 7720693.
-
(1994)
Electrophoresis
, vol.15
, pp. 1559-1565
-
-
Groß, M.1
Kosmowsky, I.J.2
Lorenz, R.3
Molitoris, H.P.4
Jaenicke, R.5
-
43
-
-
0027370350
-
Stress-response of Escherichia coli to elevated hydrostatic pressure
-
206858, 8226663
-
Welch TJ, Farewell A, Neidhardt FC, Bartlett DH. Stress-response of Escherichia coli to elevated hydrostatic pressure. J Bacteriol 1993, 175:7170-7177. 206858, 8226663.
-
(1993)
J Bacteriol
, vol.175
, pp. 7170-7177
-
-
Welch, T.J.1
Farewell, A.2
Neidhardt, F.C.3
Bartlett, D.H.4
-
44
-
-
27744544657
-
Transcriptional response reveals translation machinery as target for high pressure in Lactobacillus sanfranciscensis
-
10.1007/s00203-005-0021-4, 16044264
-
Pavlovic M, Hörmann S, Vogel R, Ehrmann M. Transcriptional response reveals translation machinery as target for high pressure in Lactobacillus sanfranciscensis. Arch Microbiol 2005, 184:11-17. 10.1007/s00203-005-0021-4, 16044264.
-
(2005)
Arch Microbiol
, vol.184
, pp. 11-17
-
-
Pavlovic, M.1
Hörmann, S.2
Vogel, R.3
Ehrmann, M.4
-
45
-
-
77952992550
-
Cellular impact of sublethal pressures on Escherichia coli
-
Washington DC: ASM Press, Michiels C, Bartlett DH, Aertsen A
-
Aertsen A, Michiels C. Cellular impact of sublethal pressures on Escherichia coli. High-pressure microbiology 2008, 87-100. Washington DC: ASM Press, Michiels C, Bartlett DH, Aertsen A.
-
(2008)
High-pressure microbiology
, pp. 87-100
-
-
Aertsen, A.1
Michiels, C.2
-
46
-
-
0028895181
-
High-pressure influences on gene and protein expression
-
10.1016/0923-2508(96)81066-7, 8584792
-
Bartlett DH, Kato C, Horikoshi K. High-pressure influences on gene and protein expression. Res Microbiol 1995, 146:697-706. 10.1016/0923-2508(96)81066-7, 8584792.
-
(1995)
Res Microbiol
, vol.146
, pp. 697-706
-
-
Bartlett, D.H.1
Kato, C.2
Horikoshi, K.3
-
47
-
-
0017888519
-
Effects of low temperature on in vivo and in vitro protein synthesis in Escherichia coli and Pseudomonas fluorescens
-
222333, 96102
-
Broeze RJ, Solomon CJ, Pope DH. Effects of low temperature on in vivo and in vitro protein synthesis in Escherichia coli and Pseudomonas fluorescens. J Bacteriol 1978, 134:861-874. 222333, 96102.
-
(1978)
J Bacteriol
, vol.134
, pp. 861-874
-
-
Broeze, R.J.1
Solomon, C.J.2
Pope, D.H.3
-
48
-
-
0031936007
-
Cold shock and adaptation
-
10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N, 9504047
-
Thieringer HA, Jones PG, Inouye M. Cold shock and adaptation. BioEssays 1998, 20:49-57. 10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N, 9504047.
-
(1998)
BioEssays
, vol.20
, pp. 49-57
-
-
Thieringer, H.A.1
Jones, P.G.2
Inouye, M.3
-
49
-
-
0037349448
-
Fuchs RPP: recX, a new SOS gene that is co-transcribed with the recA gene in Escherichia coli
-
10.1016/S1568-7864(02)00217-3, 12547390
-
Pagès V, Koffel-Schwartz N. Fuchs RPP: recX, a new SOS gene that is co-transcribed with the recA gene in Escherichia coli. DNA Repair 2003, 2:273-284. 10.1016/S1568-7864(02)00217-3, 12547390.
-
(2003)
DNA Repair
, vol.2
, pp. 273-284
-
-
Pagès, V.1
Koffel-Schwartz, N.2
-
50
-
-
0037462826
-
Escherichia coli RecX inhibits RecA recombinase and coprotease activities in vitro and in vivo
-
10.1074/jbc.M210496200, 12427742
-
Stohl EA, Brockman JP, Burkle KL, Morimatsu K, Kowalczykowski SC, Seifert HS. Escherichia coli RecX inhibits RecA recombinase and coprotease activities in vitro and in vivo. J Biol Chem 2003, 278:2278-2285. 10.1074/jbc.M210496200, 12427742.
-
(2003)
J Biol Chem
, vol.278
, pp. 2278-2285
-
-
Stohl, E.A.1
Brockman, J.P.2
Burkle, K.L.3
Morimatsu, K.4
Kowalczykowski, S.C.5
Seifert, H.S.6
-
51
-
-
67649158976
-
The major outer membrane protein OprG of Pseudomonas aeruginosa contributes to cytotoxicity and forms an anaerobically regulated, cation-selective channel
-
10.1111/j.1574-6968.2009.01651.x, 19486157
-
McPhee JB, Tamber S, Bains M, Maier E, Gellatly S, Lo A. The major outer membrane protein OprG of Pseudomonas aeruginosa contributes to cytotoxicity and forms an anaerobically regulated, cation-selective channel. FEMS Microbiol Lett 2009, 296:241-247. 10.1111/j.1574-6968.2009.01651.x, 19486157.
-
(2009)
FEMS Microbiol Lett
, vol.296
, pp. 241-247
-
-
McPhee, J.B.1
Tamber, S.2
Bains, M.3
Maier, E.4
Gellatly, S.5
Lo, A.6
-
52
-
-
0024604988
-
Characterization of mechanisms of quinolone resistance in Pseudomonas aeruginosa strains isolated in vitro and in vivo during experimental endocarditis
-
10.1128/AAC.33.5.624, 172503, 2502066
-
Chamberland S, Bayer AS, Schollaardt T, Wong SA, Bryan LE. Characterization of mechanisms of quinolone resistance in Pseudomonas aeruginosa strains isolated in vitro and in vivo during experimental endocarditis. Antimicrob Agents Chemother 1989, 33:624-634. 10.1128/AAC.33.5.624, 172503, 2502066.
-
(1989)
Antimicrob Agents Chemother
, vol.33
, pp. 624-634
-
-
Chamberland, S.1
Bayer, A.S.2
Schollaardt, T.3
Wong, S.A.4
Bryan, L.E.5
-
53
-
-
29144471255
-
Proteomic analysis of the sarcosine-insoluble outer membrane fraction of Pseudomonas aeruginosa responding to ampicilin, kanamycin, and tetracycline resistance
-
10.1021/pr050159g, 16335974
-
Peng X, Xu C, Ren H, Lin X, Wu L, Wang S. Proteomic analysis of the sarcosine-insoluble outer membrane fraction of Pseudomonas aeruginosa responding to ampicilin, kanamycin, and tetracycline resistance. J Proteome Res 2005, 4:2257-2265. 10.1021/pr050159g, 16335974.
-
(2005)
J Proteome Res
, vol.4
, pp. 2257-2265
-
-
Peng, X.1
Xu, C.2
Ren, H.3
Lin, X.4
Wu, L.5
Wang, S.6
-
54
-
-
0024653656
-
Effect of iron concentration and growth rate on the expression of protein G in Pseudomonas aeruginosa
-
Yates JM, Morris G, Brown MRW. Effect of iron concentration and growth rate on the expression of protein G in Pseudomonas aeruginosa. FEMS Microbiol Lett 1989, 58:259-262.
-
(1989)
FEMS Microbiol Lett
, vol.58
, pp. 259-262
-
-
Yates, J.M.1
Morris, G.2
Brown, M.R.W.3
-
55
-
-
0025087777
-
Outer membrane proteins of Pseudomonas
-
10.1111/j.1365-2958.1990.tb00680.x, 1700255
-
Hancock REW, Siehnel R, Martin N. Outer membrane proteins of Pseudomonas. Mol Microbiol 1990, 4:1069-1075. 10.1111/j.1365-2958.1990.tb00680.x, 1700255.
-
(1990)
Mol Microbiol
, vol.4
, pp. 1069-1075
-
-
Hancock, R.E.W.1
Siehnel, R.2
Martin, N.3
-
56
-
-
33744775995
-
Contribution of the PhoP-PhoQ and PmrA-PmrB two-component regulatory systems to Mg2+-induced gene regulation in Pseudomonas aeruginosa
-
10.1128/JB.00053-06, 1482896, 16707691
-
McPhee JB, Bains M, Winsor G, Lewenza S, Kwasnicka A, Brazas MD. Contribution of the PhoP-PhoQ and PmrA-PmrB two-component regulatory systems to Mg2+-induced gene regulation in Pseudomonas aeruginosa. J Bacteriol 2006, 188:3995-4006. 10.1128/JB.00053-06, 1482896, 16707691.
-
(2006)
J Bacteriol
, vol.188
, pp. 3995-4006
-
-
McPhee, J.B.1
Bains, M.2
Winsor, G.3
Lewenza, S.4
Kwasnicka, A.5
Brazas, M.D.6
-
57
-
-
33744974779
-
A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus
-
10.1126/science.1128393, 2800167, 16763151
-
Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Science 2006, 312:1526-1530. 10.1126/science.1128393, 2800167, 16763151.
-
(2006)
Science
, vol.312
, pp. 1526-1530
-
-
Mougous, J.D.1
Cuff, M.E.2
Raunser, S.3
Shen, A.4
Zhou, M.5
Gifford, C.A.6
-
58
-
-
31944433740
-
Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system
-
10.1073/pnas.0510322103, 1345711, 16432199
-
Pukatzki S, Ma AT, Sturtevant D, Krastins B, Sarracino D, Nelson WC. Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system. Proc Natl Acad Sci USA 2006, 103:1528-1533. 10.1073/pnas.0510322103, 1345711, 16432199.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 1528-1533
-
-
Pukatzki, S.1
Ma, A.T.2
Sturtevant, D.3
Krastins, B.4
Sarracino, D.5
Nelson, W.C.6
-
59
-
-
40849101515
-
Type VI secretion: a beginner's guide
-
10.1016/j.mib.2008.01.006, 18289922
-
Bingle LEH, Bailey CM, Pallen MJ. Type VI secretion: a beginner's guide. Curr Opin Microbiol 2008, 11:3-8. 10.1016/j.mib.2008.01.006, 18289922.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 3-8
-
-
Bingle, L.E.H.1
Bailey, C.M.2
Pallen, M.J.3
-
60
-
-
55549118213
-
SciN Is an outer membrane lipoprotein required for type VI secretion in enteroaggregative Escherichia coli
-
10.1128/JB.00945-08, 2576670, 18805985
-
Aschtgen MS, Bernard CS, De Bentzmann S, Lloubes R, Cascales E. SciN Is an outer membrane lipoprotein required for type VI secretion in enteroaggregative Escherichia coli. J Bacteriol 2008, 190:7523-7531. 10.1128/JB.00945-08, 2576670, 18805985.
-
(2008)
J Bacteriol
, vol.190
, pp. 7523-7531
-
-
Aschtgen, M.S.1
Bernard, C.S.2
De Bentzmann, S.3
Lloubes, R.4
Cascales, E.5
-
61
-
-
63049098068
-
Dissecting the bacterial type VI secretion system by a genome wide in silico analysis: what can be learned from available microbial genomic resources?
-
Boyer F, Fichant G, Berthod J, Vandenbrouck Y, Attree I. Dissecting the bacterial type VI secretion system by a genome wide in silico analysis: what can be learned from available microbial genomic resources?. BMC Genom 2009, 10:104-117.
-
(2009)
BMC Genom
, vol.10
, pp. 104-117
-
-
Boyer, F.1
Fichant, G.2
Berthod, J.3
Vandenbrouck, Y.4
Attree, I.5
-
62
-
-
71249083945
-
Type VI secretion modulates quorum sensing and stress response in Vibrio anguillarum
-
10.1111/j.1462-2920.2009.02005.x, 19624706
-
Weber B, Hasic M, Chen C, Wai SN, Milton DL. Type VI secretion modulates quorum sensing and stress response in Vibrio anguillarum. Environ Microbiol 2009, 11:3018-3028. 10.1111/j.1462-2920.2009.02005.x, 19624706.
-
(2009)
Environ Microbiol
, vol.11
, pp. 3018-3028
-
-
Weber, B.1
Hasic, M.2
Chen, C.3
Wai, S.N.4
Milton, D.L.5
-
63
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
10.1046/j.1462-2920.2002.00366.x, 12534463
-
Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VAP. Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 2002, 4:799-808. 10.1046/j.1462-2920.2002.00366.x, 12534463.
-
(2002)
Environ Microbiol
, vol.4
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins dos Santos, V.A.P.6
-
64
-
-
73449088005
-
Identification of genes regulated by the MvaT-like paralogues TurA and TurB of Pseudomonas putida KT2440
-
10.1111/j.1462-2920.2009.02064.x, 19788653
-
Renzi F, Rescalli E, Galli E, Bertoni G. Identification of genes regulated by the MvaT-like paralogues TurA and TurB of Pseudomonas putida KT2440. Environ Microbiol 2010, 12:254-263. 10.1111/j.1462-2920.2009.02064.x, 19788653.
-
(2010)
Environ Microbiol
, vol.12
, pp. 254-263
-
-
Renzi, F.1
Rescalli, E.2
Galli, E.3
Bertoni, G.4
-
65
-
-
0033028398
-
Pseudomonas syringae phytotoxins: mode of action, regulation, and biosynthesis by peptide and polyketide synthetases
-
98966, 10357851
-
Bender CL, Alarcon-Chaidez F, Gross DC. Pseudomonas syringae phytotoxins: mode of action, regulation, and biosynthesis by peptide and polyketide synthetases. Microbiol Mol Biol Rev 1999, 63:266-292. 98966, 10357851.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 266-292
-
-
Bender, C.L.1
Alarcon-Chaidez, F.2
Gross, D.C.3
-
66
-
-
10044292705
-
Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440
-
10.1111/j.1462-2920.2004.00734.x, 15560824
-
Dos Santos VAPM, Heim S, Moore ERB, Strätz M, Timmis KN. Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440. Environ Microbiol 2004, 6:1264-1286. 10.1111/j.1462-2920.2004.00734.x, 15560824.
-
(2004)
Environ Microbiol
, vol.6
, pp. 1264-1286
-
-
Dos Santos, V.A.P.M.1
Heim, S.2
Moore, E.R.B.3
Strätz, M.4
Timmis, K.N.5
-
67
-
-
0024473049
-
The inhibition by CO2 of the growth and metabolism of micro-organisms
-
10.1111/j.1365-2672.1989.tb03387.x, 2509409
-
Dixon NM, Kell DB. The inhibition by CO2 of the growth and metabolism of micro-organisms. J Appl Bacteriol 1989, 67:109-136. 10.1111/j.1365-2672.1989.tb03387.x, 2509409.
-
(1989)
J Appl Bacteriol
, vol.67
, pp. 109-136
-
-
Dixon, N.M.1
Kell, D.B.2
-
68
-
-
0030013353
-
Characterisation of carbon dioxide-inducible genes of the marine bacterium, Pseudomonas sp. S91
-
10.1111/j.1574-6968.1996.tb08311.x, 8666199
-
Stretton S, Marshall KC, Dawes IW, Goodman AE. Characterisation of carbon dioxide-inducible genes of the marine bacterium, Pseudomonas sp. S91. FEMS Microbiol Lett 1996, 140:37-42. 10.1111/j.1574-6968.1996.tb08311.x, 8666199.
-
(1996)
FEMS Microbiol Lett
, vol.140
, pp. 37-42
-
-
Stretton, S.1
Marshall, K.C.2
Dawes, I.W.3
Goodman, A.E.4
-
69
-
-
0031979648
-
Carbon dioxide as a regulator of gene expression in microorganisms
-
10.1023/A:1000610225458, 9602281
-
Stretton S, Goodman AE. Carbon dioxide as a regulator of gene expression in microorganisms. Antonie Leeuwenhoek 1998, 73:79-85. 10.1023/A:1000610225458, 9602281.
-
(1998)
Antonie Leeuwenhoek
, vol.73
, pp. 79-85
-
-
Stretton, S.1
Goodman, A.E.2
-
70
-
-
11144263144
-
PH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12
-
10.1128/JB.187.1.304-319.2005, 538838, 15601715
-
Maurer LM, Yohannes E, Bondurant SS, Radmacher M, Slonczewski JL. pH regulates genes for flagellar motility, catabolism, and oxidative stress in Escherichia coli K-12. J Bacteriol 2005, 187:304-319. 10.1128/JB.187.1.304-319.2005, 538838, 15601715.
-
(2005)
J Bacteriol
, vol.187
, pp. 304-319
-
-
Maurer, L.M.1
Yohannes, E.2
Bondurant, S.S.3
Radmacher, M.4
Slonczewski, J.L.5
-
72
-
-
0034812324
-
External-pH-dependent expression of the maltose regulon and ompF gene in Escherichia coli is affected by the level of gycerol kinase, encoded by glpK
-
10.1128/JB.183.19.5675-5683.2001, 95460, 11544231
-
Chagneau C, Heyde M, Alonso S, Portalier R, Laloi P. External-pH-dependent expression of the maltose regulon and ompF gene in Escherichia coli is affected by the level of gycerol kinase, encoded by glpK. J Bacteriol 2001, 183:5675-5683. 10.1128/JB.183.19.5675-5683.2001, 95460, 11544231.
-
(2001)
J Bacteriol
, vol.183
, pp. 5675-5683
-
-
Chagneau, C.1
Heyde, M.2
Alonso, S.3
Portalier, R.4
Laloi, P.5
-
73
-
-
0024385329
-
Construction of lac fusions to the inducible arginine-and lysine decarboxylase genes of Escherichia coli K12
-
10.1111/j.1365-2958.1989.tb00208.x, 2527331
-
Auger EA, Redding KE, Plumb T, Childs LC, Meng SY, Bennett GN. Construction of lac fusions to the inducible arginine-and lysine decarboxylase genes of Escherichia coli K12. Mol Microbiol 1989, 3:609-620. 10.1111/j.1365-2958.1989.tb00208.x, 2527331.
-
(1989)
Mol Microbiol
, vol.3
, pp. 609-620
-
-
Auger, E.A.1
Redding, K.E.2
Plumb, T.3
Childs, L.C.4
Meng, S.Y.5
Bennett, G.N.6
-
74
-
-
0038782170
-
YjdE (AdiC) is the arginine:agmatine antiporter essential for arginine-dependent acid resistance in Escherichia coli
-
10.1128/JB.185.15.4402-4409.2003, 165756, 12867448
-
Gong S, Richard H, Foster JW. YjdE (AdiC) is the arginine:agmatine antiporter essential for arginine-dependent acid resistance in Escherichia coli. J Bacteriol 2003, 185:4402-4409. 10.1128/JB.185.15.4402-4409.2003, 165756, 12867448.
-
(2003)
J Bacteriol
, vol.185
, pp. 4402-4409
-
-
Gong, S.1
Richard, H.2
Foster, J.W.3
-
75
-
-
0036062240
-
PH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli
-
10.1128/JB.184.15.4246-4258.2002, 135203, 12107143
-
Stancik LM, Stancik DM, Schmidt B, Barnhart DM, Yoncheva YN, Slonczewski JL. pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J Bacteriol 2002, 184:4246-4258. 10.1128/JB.184.15.4246-4258.2002, 135203, 12107143.
-
(2002)
J Bacteriol
, vol.184
, pp. 4246-4258
-
-
Stancik, L.M.1
Stancik, D.M.2
Schmidt, B.3
Barnhart, D.M.4
Yoncheva, Y.N.5
Slonczewski, J.L.6
-
76
-
-
0031961778
-
The role of internal urease in acid resistance of Helicobacter pylori
-
Scott DR, Weeks D, Hong C, Postius S, Melchers K, Sachs G. The role of internal urease in acid resistance of Helicobacter pylori. Gastroenterol 1998, 114:58-70.
-
(1998)
Gastroenterol
, vol.114
, pp. 58-70
-
-
Scott, D.R.1
Weeks, D.2
Hong, C.3
Postius, S.4
Melchers, K.5
Sachs, G.6
-
77
-
-
0025423943
-
PH regulation of urease levels in Streptococcus salivarius
-
10.1177/00220345900690050301, 2110582
-
Sissons CH, Perinpanayagam HER, Hancock EM, Cutress TW. pH regulation of urease levels in Streptococcus salivarius. J Dent Res 1990, 69:1131-1137. 10.1177/00220345900690050301, 2110582.
-
(1990)
J Dent Res
, vol.69
, pp. 1131-1137
-
-
Sissons, C.H.1
Perinpanayagam, H.E.R.2
Hancock, E.M.3
Cutress, T.W.4
-
78
-
-
0031969352
-
A low pH-inducible, PhoPQ-dependent acid tolerance response protects Salmonella typhimurium against inorganic acid stress
-
107183, 9573193
-
Bearson BL, Wilson L, Foster JW. A low pH-inducible, PhoPQ-dependent acid tolerance response protects Salmonella typhimurium against inorganic acid stress. J Bacteriol 1998, 180:2409-2417. 107183, 9573193.
-
(1998)
J Bacteriol
, vol.180
, pp. 2409-2417
-
-
Bearson, B.L.1
Wilson, L.2
Foster, J.W.3
-
79
-
-
0035180740
-
Calderwood SB: pepA, a gene mediating pH regulation of virulence genes in Vibrio cholerae
-
10.1128/JB.183.1.178-188.2001, 94864, 11114915
-
Behari J, Stagon L. Calderwood SB: pepA, a gene mediating pH regulation of virulence genes in Vibrio cholerae. J Bacteriol 2001, 183:178-188. 10.1128/JB.183.1.178-188.2001, 94864, 11114915.
-
(2001)
J Bacteriol
, vol.183
, pp. 178-188
-
-
Behari, J.1
Stagon, L.2
-
80
-
-
0031719490
-
The pH 6 antigen of Yersinia pestis binds to b1-linked galactosyl residues in glycosphingolipids
-
108555, 9712817
-
Payne D, Tatham D, Williamson ED, Titball RW. The pH 6 antigen of Yersinia pestis binds to b1-linked galactosyl residues in glycosphingolipids. Infect Immun 1998, 66:4545-4548. 108555, 9712817.
-
(1998)
Infect Immun
, vol.66
, pp. 4545-4548
-
-
Payne, D.1
Tatham, D.2
Williamson, E.D.3
Titball, R.W.4
-
81
-
-
0025974210
-
Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa
-
207308, 1900277
-
Galimand M, Gamper M, Zimmermann A, Haas D. Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa. J Bacteriol 1991, 173:1598-1606. 207308, 1900277.
-
(1991)
J Bacteriol
, vol.173
, pp. 1598-1606
-
-
Galimand, M.1
Gamper, M.2
Zimmermann, A.3
Haas, D.4
-
82
-
-
0025873743
-
Anaerobic growth and cyanide synthesis of Pseudomonas aeruginosa depend on anr, a regulatory gene homologous with fnr of Escherichia coli
-
10.1111/j.1365-2958.1991.tb00794.x, 1787798
-
Zimmermann A, Reimmann C, Galimand M, Haas D. Anaerobic growth and cyanide synthesis of Pseudomonas aeruginosa depend on anr, a regulatory gene homologous with fnr of Escherichia coli. Mol Microbiol 1991, 5:1483-1490. 10.1111/j.1365-2958.1991.tb00794.x, 1787798.
-
(1991)
Mol Microbiol
, vol.5
, pp. 1483-1490
-
-
Zimmermann, A.1
Reimmann, C.2
Galimand, M.3
Haas, D.4
-
83
-
-
0030771742
-
In vivo studies disprove an obligatory role of azurin in denitrification in Pseudomonas aeruginosa and show that azu expression is under control of RpoS and ANR
-
10.1099/00221287-143-9-2853, 9308169
-
Vijgenboom E, Busch JE, Canters GW. In vivo studies disprove an obligatory role of azurin in denitrification in Pseudomonas aeruginosa and show that azu expression is under control of RpoS and ANR. Microbiology 1997, 143:2853-2863. 10.1099/00221287-143-9-2853, 9308169.
-
(1997)
Microbiology
, vol.143
, pp. 2853-2863
-
-
Vijgenboom, E.1
Busch, J.E.2
Canters, G.W.3
-
84
-
-
77958600101
-
Oxygen-sensitive global regulator, Anr, is involved in the biosynthesis of poly(3-hydroxybutyrate) in Pseudomonas extremaustralis
-
10.1159/000320261, 21042031
-
Tribelli PM, Méndez BS, López NI. Oxygen-sensitive global regulator, Anr, is involved in the biosynthesis of poly(3-hydroxybutyrate) in Pseudomonas extremaustralis. J Mol Microbiol Biotechnol 2010, 19:180-188. 10.1159/000320261, 21042031.
-
(2010)
J Mol Microbiol Biotechnol
, vol.19
, pp. 180-188
-
-
Tribelli, P.M.1
Méndez, B.S.2
López, N.I.3
-
85
-
-
44849113791
-
The coordinate regulation of multiple terminal oxidases by the Pseudomonas putida ANR global regulator
-
10.1111/j.1462-2920.2008.01586.x, 18341582
-
Ugidos A, Morales G, Rial E, Williams HD, Rojo F. The coordinate regulation of multiple terminal oxidases by the Pseudomonas putida ANR global regulator. Environ Microbiol 2008, 10:1690-1702. 10.1111/j.1462-2920.2008.01586.x, 18341582.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1690-1702
-
-
Ugidos, A.1
Morales, G.2
Rial, E.3
Williams, H.D.4
Rojo, F.5
-
86
-
-
1342346618
-
The Pseudomonas putida Crc global regulator controls the expression of genes from several chromosomal catabolic pathways for aromatic compounds
-
10.1128/JB.186.5.1337-1344.2004, 344427, 14973036
-
Morales G, Linares JF, Beloso A, Albar JP, Martinez JL, Rojo F. The Pseudomonas putida Crc global regulator controls the expression of genes from several chromosomal catabolic pathways for aromatic compounds. J Bacteriol 2004, 186:1337-1344. 10.1128/JB.186.5.1337-1344.2004, 344427, 14973036.
-
(2004)
J Bacteriol
, vol.186
, pp. 1337-1344
-
-
Morales, G.1
Linares, J.F.2
Beloso, A.3
Albar, J.P.4
Martinez, J.L.5
Rojo, F.6
-
87
-
-
78649333094
-
Computational prediction of the Crc regulon identifies genus-wide and species-specific targets of catabolite repression control in Pseudomonas bacteria
-
10.1186/1471-2180-10-300, 3003667, 21108798
-
Browne P, Barret M, O'Gara F, Morrissey J. Computational prediction of the Crc regulon identifies genus-wide and species-specific targets of catabolite repression control in Pseudomonas bacteria. BMC Microbiol 2010, 10:300. 10.1186/1471-2180-10-300, 3003667, 21108798.
-
(2010)
BMC Microbiol
, vol.10
, pp. 300
-
-
Browne, P.1
Barret, M.2
O'Gara, F.3
Morrissey, J.4
-
88
-
-
33749255145
-
Oxygen, cyanide and energy generation in the cystic fibrosis pathogen Pseudomonas aeruginosa.
-
Waltham: Academic, Robert KP, Advances in Microbial Physiology
-
Williams HD, Zlosnik JEA, Ryall B. Oxygen, cyanide and energy generation in the cystic fibrosis pathogen Pseudomonas aeruginosa. 2006, 52:1--71. Waltham: Academic, Robert KP, Advances in Microbial Physiology.
-
(2006)
, vol.52
, pp. 1-71
-
-
Williams, H.D.1
Zlosnik, J.E.A.2
Ryall, B.3
-
89
-
-
0042060991
-
Expression of the Pseudomonas putida OCT plasmid alkane degradation pathway is modulated by two different global control signals: evidence from continuous cultures
-
10.1128/JB.185.16.4772-4778.2003, 166476, 12896996
-
Dinamarca MA, Aranda-Olmedo I, Puyet A, Rojo F. Expression of the Pseudomonas putida OCT plasmid alkane degradation pathway is modulated by two different global control signals: evidence from continuous cultures. J Bacteriol 2003, 185:4772-4778. 10.1128/JB.185.16.4772-4778.2003, 166476, 12896996.
-
(2003)
J Bacteriol
, vol.185
, pp. 4772-4778
-
-
Dinamarca, M.A.1
Aranda-Olmedo, I.2
Puyet, A.3
Rojo, F.4
-
90
-
-
0032523189
-
Purification of two pressure-regulated c-type cytochromes from a deep-sea barophilic bacterium, Shewanella sp. strain DB-172 F
-
Qureshi MH, Kato C, Horikoshi K. Purification of two pressure-regulated c-type cytochromes from a deep-sea barophilic bacterium, Shewanella sp. strain DB-172 F. FEMS Microbiol Lett 1998, 161:301-309.
-
(1998)
FEMS Microbiol Lett
, vol.161
, pp. 301-309
-
-
Qureshi, M.H.1
Kato, C.2
Horikoshi, K.3
-
91
-
-
68949128587
-
Function and biogenesis of iron-sulphur proteins
-
10.1038/nature08301, 19675643
-
Lill R. Function and biogenesis of iron-sulphur proteins. Nature 2009, 460:831-838. 10.1038/nature08301, 19675643.
-
(2009)
Nature
, vol.460
, pp. 831-838
-
-
Lill, R.1
-
92
-
-
33645065589
-
Iron-sulphur clusters and the problem with oxygen
-
10.1111/j.1365-2958.2006.05028.x, 16430685
-
Imlay JA. Iron-sulphur clusters and the problem with oxygen. Mol Microbiol 2006, 59:1073-1082. 10.1111/j.1365-2958.2006.05028.x, 16430685.
-
(2006)
Mol Microbiol
, vol.59
, pp. 1073-1082
-
-
Imlay, J.A.1
-
93
-
-
78649983777
-
Hydrogen peroxide inactivates the Escherichia coli Isc iron-sulphur assembly system, and OxyR induces the Suf system to compensate
-
10.1111/j.1365-2958.2010.07418.x, 3051806, 21143317
-
Jang S, Imlay JA. Hydrogen peroxide inactivates the Escherichia coli Isc iron-sulphur assembly system, and OxyR induces the Suf system to compensate. Mol Microbiol 2010, 78:1448-1467. 10.1111/j.1365-2958.2010.07418.x, 3051806, 21143317.
-
(2010)
Mol Microbiol
, vol.78
, pp. 1448-1467
-
-
Jang, S.1
Imlay, J.A.2
-
94
-
-
46649115965
-
NfuA, a new factor required for maturing Fe/S proteins in Escherichia coli under oxidative stress and iron starvation conditions
-
10.1074/jbc.M709405200, 18339628
-
Angelini S, Gerez C, Choudens SO, Sanakis Y, Fontecave M, Barras F. NfuA, a new factor required for maturing Fe/S proteins in Escherichia coli under oxidative stress and iron starvation conditions. J Biol Chem 2008, 283:14084-14091. 10.1074/jbc.M709405200, 18339628.
-
(2008)
J Biol Chem
, vol.283
, pp. 14084-14091
-
-
Angelini, S.1
Gerez, C.2
Choudens, S.O.3
Sanakis, Y.4
Fontecave, M.5
Barras, F.6
-
95
-
-
46649083462
-
A proposed role for the Azotobacter vinelandii NfuA protein as an intermediate iron-sulfur cluster carrier
-
10.1074/jbc.M709161200, 2376218, 18339629
-
Bandyopadhyay S, Naik SG, O'Carroll IP, Huynh BH, Dean DR, Johnson MK. A proposed role for the Azotobacter vinelandii NfuA protein as an intermediate iron-sulfur cluster carrier. J Biol Chem 2008, 283:14092-14099. 10.1074/jbc.M709161200, 2376218, 18339629.
-
(2008)
J Biol Chem
, vol.283
, pp. 14092-14099
-
-
Bandyopadhyay, S.1
Naik, S.G.2
O'Carroll, I.P.3
Huynh, B.H.4
Dean, D.R.5
Johnson, M.K.6
-
96
-
-
33646427470
-
IscR-dependent gene expression links iron-sulphur cluster assembly to the control of O2-regulated genes in Escherichia coli
-
10.1111/j.1365-2958.2006.05160.x, 16677314
-
Giel JL, Rodionov D, Liu M, Blattner FR, Kiley PJ. IscR-dependent gene expression links iron-sulphur cluster assembly to the control of O2-regulated genes in Escherichia coli. Mol Microbiol 2006, 60:1058-1075. 10.1111/j.1365-2958.2006.05160.x, 16677314.
-
(2006)
Mol Microbiol
, vol.60
, pp. 1058-1075
-
-
Giel, J.L.1
Rodionov, D.2
Liu, M.3
Blattner, F.R.4
Kiley, P.J.5
-
97
-
-
33745618956
-
Regulon and promoter analysis of the E. coli heat-shock factor, s32, reveals a multifaceted cellular response to heat stress
-
10.1101/gad.1428206, 1522074, 16818608
-
Nonaka G, Blankschien M, Herman C, Gross CA, Rhodius VA. Regulon and promoter analysis of the E. coli heat-shock factor, s32, reveals a multifaceted cellular response to heat stress. Genes Dev 2006, 20:1776-1789. 10.1101/gad.1428206, 1522074, 16818608.
-
(2006)
Genes Dev
, vol.20
, pp. 1776-1789
-
-
Nonaka, G.1
Blankschien, M.2
Herman, C.3
Gross, C.A.4
Rhodius, V.A.5
-
98
-
-
0038219647
-
Ferritins, iron uptake and storage from the bacterioferritin viewpoint
-
10.1093/emboj/cdg215, 156087, 12727864
-
Carrondo MA. Ferritins, iron uptake and storage from the bacterioferritin viewpoint. EMBO J 2003, 22:1959-1968. 10.1093/emboj/cdg215, 156087, 12727864.
-
(2003)
EMBO J
, vol.22
, pp. 1959-1968
-
-
Carrondo, M.A.1
-
99
-
-
84876103799
-
-
Ltd: John Wiley & Sons
-
Theil EC. Ferritin 2006, Ltd: John Wiley & Sons.
-
(2006)
Ferritin
-
-
Theil, E.C.1
-
100
-
-
27444434071
-
Genome-wide expression analysis of iron regulation in Burkholderia pseudomallei and Burkholderia mallei using DNA microarrays
-
10.1016/j.femsle.2005.09.043, 16242861
-
Tuanyok A, Kim HS, Nierman WC, Yu Y, Dunbar J, Moore RA. Genome-wide expression analysis of iron regulation in Burkholderia pseudomallei and Burkholderia mallei using DNA microarrays. FEMS Microbiol Lett 2005, 252:327-335. 10.1016/j.femsle.2005.09.043, 16242861.
-
(2005)
FEMS Microbiol Lett
, vol.252
, pp. 327-335
-
-
Tuanyok, A.1
Kim, H.S.2
Nierman, W.C.3
Yu, Y.4
Dunbar, J.5
Moore, R.A.6
-
101
-
-
0033982936
-
KEGG: Kyoto encyclopedia of genes and genomes
-
10.1093/nar/28.1.27, 102409, 10592173
-
Kanehisa M, Goto S. KEGG: Kyoto encyclopedia of genes and genomes. Nucl Acids Res 2000, 28:27-30. 10.1093/nar/28.1.27, 102409, 10592173.
-
(2000)
Nucl Acids Res
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
102
-
-
37549056553
-
Transcriptome analysis of Pseudomonas putida in response to nitrogen availability
-
10.1128/JB.01230-07, 2223721, 17965157
-
Hervas AB, Canosa I, Santero E. Transcriptome analysis of Pseudomonas putida in response to nitrogen availability. J Bacteriol 2008, 190:416-420. 10.1128/JB.01230-07, 2223721, 17965157.
-
(2008)
J Bacteriol
, vol.190
, pp. 416-420
-
-
Hervas, A.B.1
Canosa, I.2
Santero, E.3
-
103
-
-
0242276682
-
Nitrogen assimilation and global regulation in Escherichia coli
-
10.1146/annurev.micro.57.030502.090820, 12730324
-
Reitzer L. Nitrogen assimilation and global regulation in Escherichia coli. Annu Rev Microbiol 2003, 57:155-176. 10.1146/annurev.micro.57.030502.090820, 12730324.
-
(2003)
Annu Rev Microbiol
, vol.57
, pp. 155-176
-
-
Reitzer, L.1
-
104
-
-
0025812353
-
Anaerobic regulation of transcription initiation in the arcDABC operon of Pseudomonas aeruginosa
-
208152, 1906871
-
Gamper M, Zimmermann A, Haas D. Anaerobic regulation of transcription initiation in the arcDABC operon of Pseudomonas aeruginosa. J Bacteriol 1991, 173:4742-4750. 208152, 1906871.
-
(1991)
J Bacteriol
, vol.173
, pp. 4742-4750
-
-
Gamper, M.1
Zimmermann, A.2
Haas, D.3
-
105
-
-
0032906547
-
The ArgR regulatory protein, a helper to the anaerobic regulator ANR during transcriptional activation of the arcD promoter in Pseudomonas aeruginosa
-
93671, 10198009
-
Lu CD, Winteler H, Abdelal A, Haas D. The ArgR regulatory protein, a helper to the anaerobic regulator ANR during transcriptional activation of the arcD promoter in Pseudomonas aeruginosa. J Bacteriol 1999, 181:2459-2464. 93671, 10198009.
-
(1999)
J Bacteriol
, vol.181
, pp. 2459-2464
-
-
Lu, C.D.1
Winteler, H.2
Abdelal, A.3
Haas, D.4
-
106
-
-
0019119525
-
Regulation of enzyme synthesis in the arginine deiminase pathway of Pseudomonas aeruginosa
-
294610, 6252188
-
Mercenier A, Simon JP, Vander Wauven C, Haas D, Stalon V. Regulation of enzyme synthesis in the arginine deiminase pathway of Pseudomonas aeruginosa. J Bacteriol 1980, 144:159-163. 294610, 6252188.
-
(1980)
J Bacteriol
, vol.144
, pp. 159-163
-
-
Mercenier, A.1
Simon, J.P.2
Vander Wauven, C.3
Haas, D.4
Stalon, V.5
-
107
-
-
0031856844
-
Structural and functional analysis of the gene cluster encoding the enzymes of the arginine deiminase pathway of Lactobacillus sake
-
107411, 9696763
-
Zuniga M, Champomier-Verges M, Zagorec M, Perez-Martinez G. Structural and functional analysis of the gene cluster encoding the enzymes of the arginine deiminase pathway of Lactobacillus sake. J Bacteriol 1998, 180:4154-4159. 107411, 9696763.
-
(1998)
J Bacteriol
, vol.180
, pp. 4154-4159
-
-
Zuniga, M.1
Champomier-Verges, M.2
Zagorec, M.3
Perez-Martinez, G.4
-
108
-
-
33644952730
-
Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray
-
10.1111/j.1462-2920.2005.00890.x, 16343331
-
Yuste L, Hervas AB, Canosa I, Tobes R, Jimenez JI, Nogales J. Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray. Environ Microbiol 2006, 8:165-177. 10.1111/j.1462-2920.2005.00890.x, 16343331.
-
(2006)
Environ Microbiol
, vol.8
, pp. 165-177
-
-
Yuste, L.1
Hervas, A.B.2
Canosa, I.3
Tobes, R.4
Jimenez, J.I.5
Nogales, J.6
-
109
-
-
4544341015
-
Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
-
Smyth GK. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Molec Biol 2004, 3:3-28.
-
(2004)
Stat Appl Genet Molec Biol
, vol.3
, pp. 3-28
-
-
Smyth, G.K.1
-
110
-
-
0242333835
-
Normalization of cDNA microarray data
-
10.1016/S1046-2023(03)00155-5, 14597310
-
Smyth GK, Speed T. Normalization of cDNA microarray data. Methods 2003, 31:265-273. 10.1016/S1046-2023(03)00155-5, 14597310.
-
(2003)
Methods
, vol.31
, pp. 265-273
-
-
Smyth, G.K.1
Speed, T.2
-
111
-
-
18744369640
-
Use of within-array replicate spots for assessing differential expression in microarray experiments
-
10.1093/bioinformatics/bti270, 15657102
-
Smyth GK, Michaud J, Scott HS. Use of within-array replicate spots for assessing differential expression in microarray experiments. Bioinformatics 2005, 21:2067-2075. 10.1093/bioinformatics/bti270, 15657102.
-
(2005)
Bioinformatics
, vol.21
, pp. 2067-2075
-
-
Smyth, G.K.1
Michaud, J.2
Scott, H.S.3
-
112
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y. Controlling the false discovery rate: A practical and powerful approach to multiple testing. J Roy Stat Soc 1995, 57:289-300.
-
(1995)
J Roy Stat Soc
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
113
-
-
58149197594
-
Pseudomonas genome database: facilitating user-friendly, comprehensive comparisons of microbial genomes
-
10.1093/nar/gkn861, 2686508, 18978025
-
Winsor GL, Van Rossum T, Lo R, Khaira B, Whiteside MD, Hancock REW. Pseudomonas genome database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Nucl Acids Res 2009, 37:D483-D488. 10.1093/nar/gkn861, 2686508, 18978025.
-
(2009)
Nucl Acids Res
, vol.37
-
-
Winsor, G.L.1
Van Rossum, T.2
Lo, R.3
Khaira, B.4
Whiteside, M.D.5
Hancock, R.E.W.6
-
114
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT Method
-
10.1006/meth.2001.1262, 11846609
-
Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT Method. Methods 2001, 25:402-408. 10.1006/meth.2001.1262, 11846609.
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
115
-
-
0029659029
-
Involvement of s54 in exponential silencing of the Pseudomonas putida TOL plasmid Pu promoter
-
10.1046/j.1365-2958.1996.345873.x, 8821932
-
Cases II, de Lorenzo V, Pérez-Martín J. Involvement of s54 in exponential silencing of the Pseudomonas putida TOL plasmid Pu promoter. Mol Microbiol 1996, 19:7-17. 10.1046/j.1365-2958.1996.345873.x, 8821932.
-
(1996)
Mol Microbiol
, vol.19
, pp. 7-17
-
-
Cases, I.I.1
de Lorenzo, V.2
Pérez-Martín, J.3
-
116
-
-
33748313067
-
Inactivation of the Pseudomonas putida cytochrome o ubiquinol oxidase leads to a significant change in the transcriptome and to increased expression of the CIO and cbb3-1 terminal oxidases
-
10.1111/j.1462-2920.2006.01061.x, 16958757
-
Morales G, Ugidos A, Rojo F. Inactivation of the Pseudomonas putida cytochrome o ubiquinol oxidase leads to a significant change in the transcriptome and to increased expression of the CIO and cbb3-1 terminal oxidases. Environ Microbiol 2006, 8:1764-1774. 10.1111/j.1462-2920.2006.01061.x, 16958757.
-
(2006)
Environ Microbiol
, vol.8
, pp. 1764-1774
-
-
Morales, G.1
Ugidos, A.2
Rojo, F.3
|