YjdE (AdiC) is the arginine:Agmatine antiporter essential for arginine-dependent acid resistance in Escherichia coli

Journal of Bacteriology

Volumn 185, Issue 15, 2003, Pages 4402-4409

  Gong, Shimei ^a   Richard, Hope ^a   Foster, John W ^a  

^a UNIVERSITY OF SOUTH ALABAMA COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AGMATINE; AMINO ACID DECARBOXYLASE; ANTIPORTER; ARGININE; BACTERIAL PROTEIN; GENE PRODUCT; GLUTAMIC ACID; MEMBRANE PROTEIN; PROTEIN ADIC; PROTEIN YJDE; UNCLASSIFIED DRUG;

ADIC GENE; ARTICLE; BACTERIAL GENE; BACTERIAL GENETICS; DECARBOXYLATION; ENZYME ACTIVITY; ESCHERICHIA COLI; GENE CONTROL; GENE DELETION; GENETIC TRANSCRIPTION; MUTAGENESIS; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; WESTERN BLOTTING; WILD TYPE; YJDE GENE;

AGMATINE; AMINO ACID SEQUENCE; AMINO ACID TRANSPORT SYSTEMS; ANTIPORTERS; ARGININE; BASE SEQUENCE; COMPUTATIONAL BIOLOGY; DRUG RESISTANCE, BACTERIAL; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; HYDROGEN-ION CONCENTRATION; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; MUTATION;

ADIA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA;

EID: 0038782170     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.15.4402-4409.2003     Document Type: Article

References (19)

1. Auger, E. A., K. E. Redding, T. Plumb, L. C. Childs, S.-Y. Meng, and G. N. Bennett. 1989. Construction of lac fusions to the inducible arginine and lysine decarboxylase genes of Escherichia coli K-12. Mol. Microbiol. 3:609-620.
2. Bocker, E. A., and E. E. Snell. 1972. Amino acid decarboxylases, p. 217-253. In P. Boyer (ed.), The enzymes, vol. 6. Academic Press, New York, N.Y.
3. Castanie-Cornet, M. P., and J. W. Foster. 2001. Escherichia coli acid resistance: cAMP receptor protein and a 20-bp cis-acting sequence control pH and stationary phase expression of the gadA and gadBC glutamate decarboxylase genes. Microbiology 147:709-715.
4. Castanie-Cornet, M. P., T. A. Penfound, D. Smith, J. F. Elliott, and J. W. Foster. 1999. Control of acid resistance in Escherichia coli. J. Bacteriol. 181:3525-3535.
5. Datsenko, K. A., and B. L. Wanner. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. USA 97:6640-6645.
6. BAD promoter. J. Bacteriol. 177:4121-4130.
7. Hanahan, D. 1983. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166:557-580.
8. Kumar, S., N. S. Punekar, V. SatyaNarayan, and K. V. Venkatesh. 2000. Metabolic fate of glutamate and evaluation of flux through the 4-aminobutyrate (GABA) shunt in Aspergillus niger. Biotechnol. Bioeng. 67:575-584.
9. Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
10. Lin, J., I. S. Lee, J. Frey, J. L. Slonczewski, and J. W. Foster. 1995. Comparative analysis of extreme acid survival in Salmonella typhimurium, Shigella flexneri, and Escherichia coli. J. Bacteriol. 177:4097-4104.
11. Lin, J., M. P. Smith, K. C. Chapin, H. S. Baik, G. N. Bennett, and J. W. Foster. 1996. Mechanisms of acid resistance in enterohemorrhagic Escherichia coli. Appl. Environ. Microbiol. 62:3094-3100.
12. Ma, Z., H. Richard, D. L. Tucker, T. Conway, and J. W. Foster. 2002. Collaborative regulation of Escherichia coli glutamate-dependent acid resistance by two AraC-like regulators, GadX and GadW (YhiW). J. Bacteriol. 184:7001-7012.
13. Miller, J. H. 1992. A short course in bacterial genetics. A laboratory manual and handbook for Escherichia coli and related bacteria. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
14. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
15. Shi, X., and G. N. Bennett. 1994. Effects of rpoA and cysB mutations on acid induction of biodegradative agrinine decarboxylase in Escherichia coli. J. Bacteriol. 176:7017-7023.
16. Shi, X., B. C. Waasdorp, and G. N. Bennett. 1993. Modulation of acid-induced amino acid decarboxylase gene expression by hns in Escherichia coli. J. Bacteriol. 175:1182-1186.
17. Silhavy, T. J., M. L. Berman, and L. W. Enquist. 1984. Experiments with gene fusions. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
18. Stim-Herndon, K. P., T. M. Flores, and G. N. Bennett. 1996. Molecular characterization of adiY, a regulatory gene which affects expression of the biodegradative acid-induced arginine decarboxylase (adiA) of Escherichia coli. Microbiology 142:1311-1320.
19. Vogel, H. J., and D. M. Bonner. 1956. Acetylornithase of Escherichia coli: partial purification and some properties. J. Biol. Chem. 218:97-106.