메뉴 건너뛰기




Volumn 229, Issue 5, 2013, Pages 697-704

Whole-genome methylation analysis of benign and malignant colorectal tumours

Author keywords

colorectal cancer; whole genome methylation

Indexed keywords

CYCLIN DEPENDENT KINASE INHIBITOR 2A; DELETED IN COLORECTAL CARCINOMA PROTEIN; GENERAL RECEPTOR FOR PHOSPHOINOSITIDE 1 ASSOCIATED SCAFFOLD PROTEIN; NETRIN; NEUROGENIN 1; PROTEIN; PROTEIN MLH1; ROUNDABOUT RECEPTOR; SLIT PROTEIN; SOMATOMEDIN B; SUPPRESSOR OF CYTOKINE SIGNALING 1; TRANSCRIPTION FACTOR RUNX3; UNCLASSIFIED DRUG;

EID: 84875055696     PISSN: 00223417     EISSN: 10969896     Source Type: Journal    
DOI: 10.1002/path.4132     Document Type: Article
Times cited : (74)

References (33)
  • 1
    • 0033587747 scopus 로고    scopus 로고
    • CpG island methylator phenotype in colorectal cancer
    • Toyota M, Ahuja N, Ohe-Toyota M, et al,. CpG island methylator phenotype in colorectal cancer. Proc Natl Acad Sci USA 1999; 96: 8681-8686.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 8681-8686
    • Toyota, M.1    Ahuja, N.2    Ohe-Toyota, M.3
  • 2
    • 33749069927 scopus 로고    scopus 로고
    • CpG island methylator phenotype-low (CIMP-low) in colorectal cancer: Possible associations with male sex and KRAS mutations
    • Ogino S, Kawasaki T, Kirkner GJ, et al,. CpG island methylator phenotype-low (CIMP-low) in colorectal cancer: possible associations with male sex and KRAS mutations. J Mol Diagnost 2006; 8: 582-588.
    • (2006) J Mol Diagnost , vol.8 , pp. 582-588
    • Ogino, S.1    Kawasaki, T.2    Kirkner, G.J.3
  • 3
    • 56649084987 scopus 로고    scopus 로고
    • Comprehensive biostatistical analysis of CpG island methylator phenotype in colorectal cancer using a large population-based sample
    • Nosho K, Irahara N, Shima K, et al,. Comprehensive biostatistical analysis of CpG island methylator phenotype in colorectal cancer using a large population-based sample. PLoS One 2008; 3: e3698.
    • (2008) PLoS One , vol.3
    • Nosho, K.1    Irahara, N.2    Shima, K.3
  • 4
    • 34249789850 scopus 로고    scopus 로고
    • 18q loss of heterozygosity in microsatellite stable colorectal cancer is correlated with CpG island methylator phenotype-negative (CIMP-0) and inversely with CIMP-low and CIMP-high
    • Ogino S, Kawasaki T, Kirkner GJ, et al,. 18q loss of heterozygosity in microsatellite stable colorectal cancer is correlated with CpG island methylator phenotype-negative (CIMP-0) and inversely with CIMP-low and CIMP-high. BMC Cancer 2007; 7: 72.
    • (2007) BMC Cancer , vol.7 , pp. 72
    • Ogino, S.1    Kawasaki, T.2    Kirkner, G.J.3
  • 5
    • 36549059251 scopus 로고    scopus 로고
    • Epigenetic and genetic alterations in Netrin-1 receptors UNC5C and DCC in human colon cancer
    • Shin SK, Nagasaka T, Jung BH, et al,. Epigenetic and genetic alterations in Netrin-1 receptors UNC5C and DCC in human colon cancer. Gastroenterology 2007; 133: 1849-1857.
    • (2007) Gastroenterology , vol.133 , pp. 1849-1857
    • Shin, S.K.1    Nagasaka, T.2    Jung, B.H.3
  • 6
    • 54249165951 scopus 로고    scopus 로고
    • Hypermethylator phenotype in sporadic colon cancer: Study on a population-based series of 582 cases
    • Barault L, Charon-Barra C, Jooste V, et al,. Hypermethylator phenotype in sporadic colon cancer: study on a population-based series of 582 cases. Cancer Res 2008; 68: 8541-8546.
    • (2008) Cancer Res , vol.68 , pp. 8541-8546
    • Barault, L.1    Charon-Barra, C.2    Jooste, V.3
  • 7
    • 77949759545 scopus 로고    scopus 로고
    • The role of the CpG island methylator phenotype in colorectal cancer prognosis depends on microsatellite instability screening status
    • Dahlin AM, Palmqvist R, Henriksson ML, et al,. The role of the CpG island methylator phenotype in colorectal cancer prognosis depends on microsatellite instability screening status. Clin Cancer Res 2010; 16: 1845-1855.
    • (2010) Clin Cancer Res , vol.16 , pp. 1845-1855
    • Dahlin, A.M.1    Palmqvist, R.2    Henriksson, M.L.3
  • 8
    • 73449118889 scopus 로고    scopus 로고
    • Prognostic implications of CpG island hypermethylator phenotype in colorectal cancers
    • Kim JH, Shin SH, Kwon HJ, et al,. Prognostic implications of CpG island hypermethylator phenotype in colorectal cancers. Virchows Arch 2009; 455: 485-494.
    • (2009) Virchows Arch , vol.455 , pp. 485-494
    • Kim, J.H.1    Shin, S.H.2    Kwon, H.J.3
  • 9
    • 80052926952 scopus 로고    scopus 로고
    • Comprehensive analysis of CpG island methylator phenotype (CIMP)-high, -low, and -negative colorectal cancers based on protein marker expression and molecular features
    • Zlobec I, Bihl M, Foerster A, et al,. Comprehensive analysis of CpG island methylator phenotype (CIMP)-high, -low, and -negative colorectal cancers based on protein marker expression and molecular features. J Pathol 2011; 225: 336-343.
    • (2011) J Pathol , vol.225 , pp. 336-343
    • Zlobec, I.1    Bihl, M.2    Foerster, A.3
  • 10
    • 74949089956 scopus 로고    scopus 로고
    • Three DNA methylation epigenotypes in human colorectal cancer
    • Yagi K, Akagi K, Hayashi H, et al,. Three DNA methylation epigenotypes in human colorectal cancer. Clin Cancer Res 2010; 16: 21-33.
    • (2010) Clin Cancer Res , vol.16 , pp. 21-33
    • Yagi, K.1    Akagi, K.2    Hayashi, H.3
  • 11
    • 77952449085 scopus 로고    scopus 로고
    • Comprehensive profiling of DNA methylation in colorectal cancer reveals subgroups with distinct clinicopathological and molecular features
    • Ang PW, Loh M, Liem N, et al,. Comprehensive profiling of DNA methylation in colorectal cancer reveals subgroups with distinct clinicopathological and molecular features. BMC Cancer 2010; 10: 227.
    • (2010) BMC Cancer , vol.10 , pp. 227
    • Ang, P.W.1    Loh, M.2    Liem, N.3
  • 12
    • 84856549042 scopus 로고    scopus 로고
    • Genome-scale analysis of aberrant DNA methylation in colorectal cancer
    • Hinoue T, Weisenberger DJ, Lange CP, et al,. Genome-scale analysis of aberrant DNA methylation in colorectal cancer. Genome Res 2012; 22: 271-282.
    • (2012) Genome Res , vol.22 , pp. 271-282
    • Hinoue, T.1    Weisenberger, D.J.2    Lange, C.P.3
  • 13
    • 84860589077 scopus 로고    scopus 로고
    • Assessment of colorectal cancer molecular features along bowel subsites challenges the conception of distinct dichotomy of proximal versus distal colorectum
    • Yamauchi M, Morikawa T, Kuchiba A, et al,. Assessment of colorectal cancer molecular features along bowel subsites challenges the conception of distinct dichotomy of proximal versus distal colorectum. Gut 2012; 61: 847-854.
    • (2012) Gut , vol.61 , pp. 847-854
    • Yamauchi, M.1    Morikawa, T.2    Kuchiba, A.3
  • 14
    • 84863922124 scopus 로고    scopus 로고
    • Comprehensive molecular characterization of human colon and rectal cancer
    • Cancer Genome Atlas N,. Comprehensive molecular characterization of human colon and rectal cancer. Nature 2012; 487: 330-337.
    • (2012) Nature , vol.487 , pp. 330-337
    • Cancer Genome Atlas, N.1
  • 17
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    • Subramanian A, Tamayo P, Mootha VK, et al,. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 2005; 102: 15545-15550.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 15545-15550
    • Subramanian, A.1    Tamayo, P.2    Mootha, V.K.3
  • 18
    • 84875055496 scopus 로고    scopus 로고
    • Analysis of hypermethylation and expression profiles of APC and ATM genes in patients with oral squamous cell carcinoma
    • Rigi-Ladiz MA, Kordi-Tamandani DM, Torkamanzehi A,. Analysis of hypermethylation and expression profiles of APC and ATM genes in patients with oral squamous cell carcinoma. Clinical Epigenet 2011; 3: 6.
    • (2011) Clinical Epigenet , vol.3 , pp. 6
    • Rigi-Ladiz, M.A.1    Kordi-Tamandani, D.M.2    Torkamanzehi, A.3
  • 19
    • 85047697132 scopus 로고    scopus 로고
    • Aberrant methylation of the ATM promoter correlates with increased radiosensitivity in a human colorectal tumor cell line
    • Kim WJ, Vo QN, Shrivastav M, et al,. Aberrant methylation of the ATM promoter correlates with increased radiosensitivity in a human colorectal tumor cell line. Oncogene 2002; 21: 3864-3871.
    • (2002) Oncogene , vol.21 , pp. 3864-3871
    • Kim, W.J.1    Vo, Q.N.2    Shrivastav, M.3
  • 20
    • 33646491424 scopus 로고    scopus 로고
    • Methylation of the ATM promoter in glioma cells alters ionizing radiation sensitivity
    • Roy K, Wang L, Makrigiorgos GM, et al,. Methylation of the ATM promoter in glioma cells alters ionizing radiation sensitivity. Biochem Biophys Res Commun 2006; 344: 821-826.
    • (2006) Biochem Biophys Res Commun , vol.344 , pp. 821-826
    • Roy, K.1    Wang, L.2    Makrigiorgos, G.M.3
  • 21
    • 33745541234 scopus 로고    scopus 로고
    • CpG island methylator phenotype underlies sporadic microsatellite instability and is tightly associated with BRAF mutation in colorectal cancer
    • Weisenberger DJ, Siegmund KD, Campan M, et al,. CpG island methylator phenotype underlies sporadic microsatellite instability and is tightly associated with BRAF mutation in colorectal cancer. Nat Genet 2006; 38: 787-793.
    • (2006) Nat Genet , vol.38 , pp. 787-793
    • Weisenberger, D.J.1    Siegmund, K.D.2    Campan, M.3
  • 22
    • 3042631054 scopus 로고    scopus 로고
    • Metabotropic glutamate receptor 4-mediated 5-fluorouracil resistance in a human colon cancer cell line
    • Yoo BC, Jeon E, Hong SH, et al,. Metabotropic glutamate receptor 4-mediated 5-fluorouracil resistance in a human colon cancer cell line. Clin Cancer Res 2004; 10: 4176-4184.
    • (2004) Clin Cancer Res , vol.10 , pp. 4176-4184
    • Yoo, B.C.1    Jeon, E.2    Hong, S.H.3
  • 23
    • 57349159203 scopus 로고    scopus 로고
    • Slit2 inhibits growth and metastasis of fibrosarcoma and squamous cell carcinoma
    • Kim HK, Zhang H, Li H, et al,. Slit2 inhibits growth and metastasis of fibrosarcoma and squamous cell carcinoma. Neoplasia 2008; 10: 1411-1420.
    • (2008) Neoplasia , vol.10 , pp. 1411-1420
    • Kim, H.K.1    Zhang, H.2    Li, H.3
  • 24
    • 0042925385 scopus 로고    scopus 로고
    • The cell death regulator GRIM-19 is an inhibitor of signal transducer and activator of transcription 3
    • Zhang J, Yang J, Roy SK, et al,. The cell death regulator GRIM-19 is an inhibitor of signal transducer and activator of transcription 3. Proc Natl Acad Sci USA 2003; 100: 9342-9347.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 9342-9347
    • Zhang, J.1    Yang, J.2    Roy, S.K.3
  • 25
    • 33847406439 scopus 로고    scopus 로고
    • Activation of STAT3 is a marker of poor prognosis in human colorectal cancer
    • Kusaba T, Nakayama T, Yamazumi K, et al,. Activation of STAT3 is a marker of poor prognosis in human colorectal cancer. Oncol Rep 2006; 15: 1445-1451.
    • (2006) Oncol Rep , vol.15 , pp. 1445-1451
    • Kusaba, T.1    Nakayama, T.2    Yamazumi, K.3
  • 26
    • 84861186736 scopus 로고    scopus 로고
    • Jekyll and Hyde: The role of the microenvironment on the progression of cancer
    • Allen M, Louise Jones J,. Jekyll and Hyde: the role of the microenvironment on the progression of cancer. J Pathol 2011; 223: 162-176.
    • (2011) J Pathol , vol.223 , pp. 162-176
    • Allen, M.1    Louise, J.J.2
  • 27
    • 76649105778 scopus 로고    scopus 로고
    • GRASP and IPCEF promote ARF-to-Rac signaling and cell migration by coordinating the association of ARNO/cytohesin 2 with Dock180
    • White DT, McShea KM, Attar MA, et al,. GRASP and IPCEF promote ARF-to-Rac signaling and cell migration by coordinating the association of ARNO/cytohesin 2 with Dock180. Mol Biol Cell 2010; 21: 562-571.
    • (2010) Mol Biol Cell , vol.21 , pp. 562-571
    • White, D.T.1    McShea, K.M.2    Attar, M.A.3
  • 29
    • 0032549704 scopus 로고    scopus 로고
    • The Ink4a tumor suppressor gene product, p19Arf, interacts with MDM2 and neutralizes MDM2's inhibition of p53
    • Pomerantz J, Schreiber-Agus N, Liegeois NJ, et al,. The Ink4a tumor suppressor gene product, p19Arf, interacts with MDM2 and neutralizes MDM2's inhibition of p53. Cell 1998; 92: 713-723.
    • (1998) Cell , vol.92 , pp. 713-723
    • Pomerantz, J.1    Schreiber-Agus, N.2    Liegeois, N.J.3
  • 30
    • 60749086521 scopus 로고    scopus 로고
    • Gene methylation profiles of normal mucosa, and benign and malignant colorectal tumors identify early onset markers
    • Ahlquist T, Lind GE, Costa VL, et al,. Gene methylation profiles of normal mucosa, and benign and malignant colorectal tumors identify early onset markers. Mol Cancer 2008; 7: 94.
    • (2008) Mol Cancer , vol.7 , pp. 94
    • Ahlquist, T.1    Lind, G.E.2    Costa, V.L.3
  • 31
    • 84875053749 scopus 로고    scopus 로고
    • Effects of riluzole (RZ) and ionizing radiation (IR) in metabotropic glutamate receptor-1 (GRM1)-positive human melanoma
    • abstr 9083
    • Green C, Schiff D, Khan A, et al,. Effects of riluzole (RZ) and ionizing radiation (IR) in metabotropic glutamate receptor-1 (GRM1)-positive human melanoma. J Clin Oncol 2009; 27: (suppl; abstr 9083).
    • (2009) J Clin Oncol , vol.27 , Issue.SUPPL.
    • Green, C.1    Schiff, D.2    Khan, A.3
  • 32
    • 49949108326 scopus 로고    scopus 로고
    • Type-3 metabotropic glutamate receptors negatively modulate bone morphogenetic protein receptor signaling and support the tumourigenic potential of glioma-initiating cells
    • Ciceroni C, Arcella A, Mosillo P, et al,. Type-3 metabotropic glutamate receptors negatively modulate bone morphogenetic protein receptor signaling and support the tumourigenic potential of glioma-initiating cells. Neuropharmacology 2008; 55: 568-576.
    • (2008) Neuropharmacology , vol.55 , pp. 568-576
    • Ciceroni, C.1    Arcella, A.2    Mosillo, P.3
  • 33
    • 0035831296 scopus 로고    scopus 로고
    • Hierarchical organization of guidance receptors: Silencing of netrin attraction by slit through a Robo/DCC receptor complex
    • Stein E, Tessier-Lavigne M,. Hierarchical organization of guidance receptors: silencing of netrin attraction by slit through a Robo/DCC receptor complex. Science 2001; 291: 1928-1938.
    • (2001) Science , vol.291 , pp. 1928-1938
    • Stein, E.1    Tessier-Lavigne, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.