메뉴 건너뛰기




Volumn 154, Issue 2, 2013, Pages 371-384

Matrilineal evidence for demographic expansion, low diversity and lack of phylogeographic structure in the Atlantic forest endemic Greenish Schiffornis Schiffornis virescens (Aves: Tityridae)

Author keywords

Atlantic forest; Historical demography; mtDNA; Phylogeography; Schiffornis

Indexed keywords

BIOME; CYTOCHROME; DEMOGRAPHIC TREND; GENOME; MITOCHONDRIAL DNA; PASSERINE; PHYLOGENETICS; PHYLOGEOGRAPHY; POPULATION DISTRIBUTION; POPULATION GENETICS; SPECIES DIVERSITY; TAXONOMY;

EID: 84874971531     PISSN: 21937192     EISSN: 21937206     Source Type: Journal    
DOI: 10.1007/s10336-012-0901-8     Document Type: Article
Times cited : (27)

References (80)
  • 1
    • 0036656033 scopus 로고    scopus 로고
    • Molecular systematics and the role of the "varzea" - "terra-firme" ecotone in the diversification of Xiphorhynchus woodcreepers (Aves: Dendrocolaptidae)
    • Aleixo A (2002) Molecular systematics and the role of the "varzea" - "terra-firme" ecotone in the diversification of Xiphorhynchus woodcreepers (Aves: Dendrocolaptidae). Auk 119(3): 621-640.
    • (2002) Auk , vol.119 , Issue.3 , pp. 621-640
    • Aleixo, A.1
  • 2
    • 3042578225 scopus 로고    scopus 로고
    • Historical diversification of a Terra-firme forest bird superspecies: a phylogeographic perspective on the role of different hypotheses of Amazonian diversification
    • Aleixo A (2004) Historical diversification of a Terra-firme forest bird superspecies: a phylogeographic perspective on the role of different hypotheses of Amazonian diversification. Evolution 58(6): 1303-1317.
    • (2004) Evolution , vol.58 , Issue.6 , pp. 1303-1317
    • Aleixo, A.1
  • 3
    • 79952684501 scopus 로고    scopus 로고
    • Land planarians (Platyhelminthes) as a model organism for fine-scale phylogeographic studies: understanding patterns of biodiversity in the Brazilian Atlantic Forest hotspot
    • Álvarez-Presas M, Carbayo F, Rozas J, Riutort M (2011) Land planarians (Platyhelminthes) as a model organism for fine-scale phylogeographic studies: understanding patterns of biodiversity in the Brazilian Atlantic Forest hotspot. J Evol Biol 24(4): 887-896.
    • (2011) J Evol Biol , vol.24 , Issue.4 , pp. 887-896
    • Álvarez-Presas, M.1    Carbayo, F.2    Rozas, J.3    Riutort, M.4
  • 4
    • 84856249842 scopus 로고    scopus 로고
    • Demographic processes in the montane Atlantic rainforest: molecular and Cytogenetic evidence from the endemic frog Proceratophrys boiei
    • Amaro RC, Carnaval AC, Yonenaga-Yassuda Y, Trefaut Rodrigues M (2012) Demographic processes in the montane Atlantic rainforest: molecular and Cytogenetic evidence from the endemic frog Proceratophrys boiei. Mol Phylogenet Evol 63: 880-888.
    • (2012) Mol Phylogenet Evol , vol.63 , pp. 880-888
    • Amaro, R.C.1    Carnaval, A.C.2    Yonenaga-Yassuda, Y.3    Trefaut Rodrigues, M.4
  • 5
    • 17444424295 scopus 로고    scopus 로고
    • Serial SimCoal: a population genetics model for data from multiple populations and points in time
    • Anderson CNK, Ramakrishnan U, Chan YL, Hadly EA (2005) Serial SimCoal: a population genetics model for data from multiple populations and points in time. Bioinformatics 21(8): 1733-1734.
    • (2005) Bioinformatics , vol.21 , Issue.8 , pp. 1733-1734
    • Anderson, C.N.K.1    Ramakrishnan, U.2    Chan, Y.L.3    Hadly, E.A.4
  • 7
    • 33644936396 scopus 로고    scopus 로고
    • Bird Species Sensitivity in a Fragmented Landscape of the Atlantic Forest in Southern Brazil1
    • Anjos L (2006) Bird Species Sensitivity in a Fragmented Landscape of the Atlantic Forest in Southern Brazil1. Biotropica 38(2): 229-234.
    • (2006) Biotropica , vol.38 , Issue.2 , pp. 229-234
    • Anjos, L.1
  • 10
    • 0002447606 scopus 로고    scopus 로고
    • Mitochondrial control region sequences as tools for understanding evolution
    • D. P. Mindell (Ed.), San Diego: Academic
    • Baker AJ, Marshall HD (1997) Mitochondrial control region sequences as tools for understanding evolution. In: Mindell DP (ed) Avian molecular evolution and systematics. Academic, San Diego, pp 51-82.
    • (1997) Avian Molecular Evolution and Systematics , pp. 51-82
    • Baker, A.J.1    Marshall, H.D.2
  • 11
    • 77958477282 scopus 로고    scopus 로고
    • Phylogeography and historical demography of the Neotropical stingless bee Melipona quadrifasciata (Hymenoptera, Apidae): incongruence between morphology and mitochondrial DNA
    • Batalha-Filho H, Waldschmidt AM, Campos LAO, Tavares MG, Fernandes-Salomão TM (2010) Phylogeography and historical demography of the Neotropical stingless bee Melipona quadrifasciata (Hymenoptera, Apidae): incongruence between morphology and mitochondrial DNA. Apidologie 41(5): 534-547.
    • (2010) Apidologie , vol.41 , Issue.5 , pp. 534-547
    • Batalha-Filho, H.1    Waldschmidt, A.M.2    Campos, L.A.O.3    Tavares, M.G.4    Fernandes-Salomão, T.M.5
  • 12
    • 84867695256 scopus 로고    scopus 로고
    • Phylogeography of an Atlantic forest passerine reveals demographic stability through the last glacial maximum
    • Batalha-Filho H, Cabanne GS, Miyaki CY (2012) Phylogeography of an Atlantic forest passerine reveals demographic stability through the last glacial maximum. Mol Phylogenet Evol. http://dx. doi. org/10. 1016/j. ympev. 2012. 08. 010.
    • (2012) Mol Phylogenet Evol
    • Batalha-Filho, H.1    Cabanne, G.S.2    Miyaki, C.Y.3
  • 13
    • 0036743632 scopus 로고    scopus 로고
    • The genetic effects of forest fragmentation on five species of Amazonian birds
    • Bates JM (2002) The genetic effects of forest fragmentation on five species of Amazonian birds. J Avian Biol 33(3): 276-294.
    • (2002) J Avian Biol , vol.33 , Issue.3 , pp. 276-294
    • Bates, J.M.1
  • 14
    • 0037022035 scopus 로고    scopus 로고
    • South and southeast Brazilian grasslands during Late Quaternary times: a synthesis
    • Behling H (2002) South and southeast Brazilian grasslands during Late Quaternary times: a synthesis. Palaeogeogr Palaeoclimatol Palaeoecol 177(1-2): 19-27.
    • (2002) Palaeogeogr Palaeoclimatol Palaeoecol , vol.177 , Issue.1-2 , pp. 19-27
    • Behling, H.1
  • 15
    • 0035526668 scopus 로고    scopus 로고
    • Tropical rain forest and climate dynamics of the Atlantic lowland, Southern Brazil, during the late Quaternary
    • Behling H, Negrelle RRB (2001) Tropical rain forest and climate dynamics of the Atlantic lowland, Southern Brazil, during the late Quaternary. Quat Res 56(3): 383-389.
    • (2001) Quat Res , vol.56 , Issue.3 , pp. 383-389
    • Behling, H.1    Negrelle, R.R.B.2
  • 16
    • 0037141191 scopus 로고    scopus 로고
    • Late Quaternary vegetational and climate dynamics in southeastern Brazil, inferences from marine cores GeoB 3229-2 and GeoB 3202-1
    • Behling H, Arz HW, Patzold J, Wefer G (2002) Late Quaternary vegetational and climate dynamics in southeastern Brazil, inferences from marine cores GeoB 3229-2 and GeoB 3202-1. Palaeogeogr Palaeoclimatol Palaeoecol 179(3-4): 227-243.
    • (2002) Palaeogeogr Palaeoclimatol Palaeoecol , vol.179 , Issue.3-4 , pp. 227-243
    • Behling, H.1    Arz, H.W.2    Patzold, J.3    Wefer, G.4
  • 17
    • 33744466013 scopus 로고    scopus 로고
    • Serial coalescent simulations suggest a weak genealogical relationship between Etruscans and modern Tuscans
    • Belle EM, Ramakrishnan U, Mountain JL, Barbujani G (2006) Serial coalescent simulations suggest a weak genealogical relationship between Etruscans and modern Tuscans. Proc Natl Acad Sci USA 103(21): 8012-8017.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.21 , pp. 8012-8017
    • Belle, E.M.1    Ramakrishnan, U.2    Mountain, J.L.3    Barbujani, G.4
  • 18
    • 70149084366 scopus 로고    scopus 로고
    • Ecology predicts levels of genetic differentiation in Neotropical birds
    • Burney CW, Brumfield RT (2009) Ecology predicts levels of genetic differentiation in Neotropical birds. Am Nat 174(3): 358-368.
    • (2009) Am Nat , vol.174 , Issue.3 , pp. 358-368
    • Burney, C.W.1    Brumfield, R.T.2
  • 19
    • 34247332662 scopus 로고    scopus 로고
    • Phylogeography of Xiphorhynchus fuscus (Passeriformes, Dendrocolaptidae): vicariance and recent demographic expansion in southern Atlantic forest
    • Cabanne GS, Santos FR, Miyaki CY (2007) Phylogeography of Xiphorhynchus fuscus (Passeriformes, Dendrocolaptidae): vicariance and recent demographic expansion in southern Atlantic forest. Biol J Linn Soc 91(1): 73-84.
    • (2007) Biol J Linn Soc , vol.91 , Issue.1 , pp. 73-84
    • Cabanne, G.S.1    Santos, F.R.2    Miyaki, C.Y.3
  • 20
    • 56549112711 scopus 로고    scopus 로고
    • Nuclear and mitochondrial phylogeography of the Atlantic forest endemic Xiphorhynchus fuscus (Aves: Dendrocolaptidae): biogeography and systematics implications
    • Cabanne GS, d'Horta FM, Sari EHR, Santos FR, Miyaki CY (2008) Nuclear and mitochondrial phylogeography of the Atlantic forest endemic Xiphorhynchus fuscus (Aves: Dendrocolaptidae): biogeography and systematics implications. Mol Phylogenet Evol 49: 760-773.
    • (2008) Mol Phylogenet Evol , vol.49 , pp. 760-773
    • Cabanne, G.S.1    D'Horta, F.M.2    Sari, E.H.R.3    Santos, F.R.4    Miyaki, C.Y.5
  • 21
    • 79960432634 scopus 로고    scopus 로고
    • Evolution of Dendrocolaptes platyrostris (Aves: Furnariidae) between the South American open vegetation corridor and the Atlantic forest
    • Cabanne GS, D'Horta FM, Meyer D, Silva JMC, Miyaki CY (2011) Evolution of Dendrocolaptes platyrostris (Aves: Furnariidae) between the South American open vegetation corridor and the Atlantic forest. Biol J Linn Soc 103(4): 801-820.
    • (2011) Biol J Linn Soc , vol.103 , Issue.4 , pp. 801-820
    • Cabanne, G.S.1    D'Horta, F.M.2    Meyer, D.3    Silva, J.M.C.4    Miyaki, C.Y.5
  • 22
    • 45249117221 scopus 로고    scopus 로고
    • Historical climate modeling predicts patterns of current biodiversity in the Brazilian Atlantic forest
    • Carnaval AC, Moritz C (2008) Historical climate modeling predicts patterns of current biodiversity in the Brazilian Atlantic forest. J Biogeogr 35: 1187-1201.
    • (2008) J Biogeogr , vol.35 , pp. 1187-1201
    • Carnaval, A.C.1    Moritz, C.2
  • 23
    • 59849093347 scopus 로고    scopus 로고
    • Stability predicts genetic diversity in the Brazilian Atlantic forest hotspot
    • Carnaval AC, Hickerson MJ, Haddad CFB, Rodrigues MT, Moritz C (2009) Stability predicts genetic diversity in the Brazilian Atlantic forest hotspot. Science 323(5915): 785-789.
    • (2009) Science , vol.323 , Issue.5915 , pp. 785-789
    • Carnaval, A.C.1    Hickerson, M.J.2    Haddad, C.F.B.3    Rodrigues, M.T.4    Moritz, C.5
  • 24
    • 33646483919 scopus 로고    scopus 로고
    • Bayesian estimation of the timing and severity of a population bottleneck from ancient DNA
    • Chan YL, Anderson CNK, Hadly EA (2006) Bayesian estimation of the timing and severity of a population bottleneck from ancient DNA. PLoS Genet 2(4): 451-460.
    • (2006) PLoS Genet , vol.2 , Issue.4 , pp. 451-460
    • Chan, Y.L.1    Anderson, C.N.K.2    Hadly, E.A.3
  • 25
    • 18744367198 scopus 로고    scopus 로고
    • Complex evolutionary history of a Neotropical lowland forest bird (Lepidothrix coronata) and its implications for historical hypotheses of the origin of Neotropical avian diversity
    • Cheviron ZA, Hackett SJ, Capparella AP (2005) Complex evolutionary history of a Neotropical lowland forest bird (Lepidothrix coronata) and its implications for historical hypotheses of the origin of Neotropical avian diversity. Mol Phylogenet Evol 36(2): 338-357.
    • (2005) Mol Phylogenet Evol , vol.36 , Issue.2 , pp. 338-357
    • Cheviron, Z.A.1    Hackett, S.J.2    Capparella, A.P.3
  • 27
    • 79954588284 scopus 로고    scopus 로고
    • The genetic effects of Late Quaternary climatic changes over a tropical latitudinal gradient: diversification of an Atlantic Forest passerine
    • d'Horta F, Cabanne GS, Meyer D, Miyaki CY (2011) The genetic effects of Late Quaternary climatic changes over a tropical latitudinal gradient: diversification of an Atlantic Forest passerine. Mol Ecol 20: 1923-1935.
    • (2011) Mol Ecol , vol.20 , pp. 1923-1935
    • D'Horta, F.1    Cabanne, G.S.2    Meyer, D.3    Miyaki, C.Y.4
  • 28
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond A, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.1    Rambaut, A.2
  • 29
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes-application to human mitochondrial-DNA restriction data
    • Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes-application to human mitochondrial-DNA restriction data. Genetics 131(2): 479-491.
    • (1992) Genetics , vol.131 , Issue.2 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 31
    • 65349191801 scopus 로고    scopus 로고
    • Genetic evidence of geographical groups among Neanderthals
    • Fabre V, Condemi S, Degioanni A (2009) Genetic evidence of geographical groups among Neanderthals. PLoS ONE 4(4): e5151.
    • (2009) PLoS ONE , vol.4 , Issue.4
    • Fabre, V.1    Condemi, S.2    Degioanni, A.3
  • 32
    • 67649861387 scopus 로고    scopus 로고
    • Geographical variation in genetic structure of an Atlantic Coastal Forest frog reveals regional differences in habitat stability
    • Fitzpatrick SW, Brasileiro CA, Haddad CFB, Zamudio KR (2009) Geographical variation in genetic structure of an Atlantic Coastal Forest frog reveals regional differences in habitat stability. Mol Ecol 18(13): 2877-2896.
    • (2009) Mol Ecol , vol.18 , Issue.13 , pp. 2877-2896
    • Fitzpatrick, S.W.1    Brasileiro, C.A.2    Haddad, C.F.B.3    Zamudio, K.R.4
  • 33
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu YX (1997) Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147(2): 915-925.
    • (1997) Genetics , vol.147 , Issue.2 , pp. 915-925
    • Fu, Y.X.1
  • 35
    • 33750206772 scopus 로고    scopus 로고
    • Phylogeography of the Bothrops jararaca complex (Serpentes: Viperidae): past fragmentation and island colonization in the Brazilian Atlantic Forest
    • Grazziotin FG, Monzel M, Echeverrigaray S, Bonatto SL (2006) Phylogeography of the Bothrops jararaca complex (Serpentes: Viperidae): past fragmentation and island colonization in the Brazilian Atlantic Forest. Mol Ecol 15(13): 3969-3982.
    • (2006) Mol Ecol , vol.15 , Issue.13 , pp. 3969-3982
    • Grazziotin, F.G.1    Monzel, M.2    Echeverrigaray, S.3    Bonatto, S.L.4
  • 36
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52(5): 696-704.
    • (2003) Syst Biol , vol.52 , Issue.5 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 39
    • 0034702196 scopus 로고    scopus 로고
    • The genetic legacy of the Quaternary ice ages
    • Hewitt G (2000) The genetic legacy of the Quaternary ice ages. Nature 405(6789): 907-913.
    • (2000) Nature , vol.405 , Issue.6789 , pp. 907-913
    • Hewitt, G.1
  • 40
    • 1242299019 scopus 로고    scopus 로고
    • Genetic consequences of climatic oscillations in the Quaternary
    • Hewitt GM (2004) Genetic consequences of climatic oscillations in the Quaternary. Philos Trans R Soc Lond B 359(1442): 183-195.
    • (2004) Philos Trans R Soc Lond B , vol.359 , Issue.1442 , pp. 183-195
    • Hewitt, G.M.1
  • 41
    • 3142714474 scopus 로고    scopus 로고
    • Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis
    • Hey J, Nielsen R (2004) Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis. Genetics 167(2): 747-760.
    • (2004) Genetics , vol.167 , Issue.2 , pp. 747-760
    • Hey, J.1    Nielsen, R.2
  • 42
    • 2642521485 scopus 로고    scopus 로고
    • Phylogenetic relationships of woodcreepers (Aves: Dendrocolaptinae) incongruence between molecular and morphological data
    • Irestedt M, Fjeldsa J, Ericson PGP (2004) Phylogenetic relationships of woodcreepers (Aves: Dendrocolaptinae) incongruence between molecular and morphological data. J Avian Biol 35(3): 280-288.
    • (2004) J Avian Biol , vol.35 , Issue.3 , pp. 280-288
    • Irestedt, M.1    Fjeldsa, J.2    Ericson, P.G.P.3
  • 43
    • 0033531736 scopus 로고    scopus 로고
    • Pleistocene effects on North American songbird evolution
    • Klicka J, Zink RM (1999) Pleistocene effects on North American songbird evolution. Proc R Soc Lond B 266: 695-700.
    • (1999) Proc R Soc Lond B , vol.266 , pp. 695-700
    • Klicka, J.1    Zink, R.M.2
  • 44
    • 70450281762 scopus 로고    scopus 로고
    • Statistical phylogeography
    • Knowles LL (2009) Statistical phylogeography. Annu Rev Ecol Evol Syst 40: 593-612.
    • (2009) Annu Rev Ecol Evol Syst , vol.40 , pp. 593-612
    • Knowles, L.L.1
  • 45
    • 33645108873 scopus 로고    scopus 로고
    • LAMARC 2.0: maximum likelihood and Bayesian estimation of population parameters
    • Kuhner MK (2006) LAMARC 2. 0: maximum likelihood and Bayesian estimation of population parameters. Bioinformatics 22(6): 768-770.
    • (2006) Bioinformatics , vol.22 , Issue.6 , pp. 768-770
    • Kuhner, M.K.1
  • 46
    • 41549108066 scopus 로고    scopus 로고
    • Mitochondrial DNA corroborates the species distinctiveness of the Planalto (Thamnophilus pelzelni Hellmayr, 1924) and the Sooretama (T. ambiguus Swainson, 1825) Slaty-antshrikes (Passeriformes: Thamnophilidae)
    • Lacerda DR, Marini MA, Santos FR (2007) Mitochondrial DNA corroborates the species distinctiveness of the Planalto (Thamnophilus pelzelni Hellmayr, 1924) and the Sooretama (T. ambiguus Swainson, 1825) Slaty-antshrikes (Passeriformes: Thamnophilidae). Braz J Biol 67: 873-882.
    • (2007) Braz J Biol , vol.67 , pp. 873-882
    • Lacerda, D.R.1    Marini, M.A.2    Santos, F.R.3
  • 47
    • 27944508664 scopus 로고    scopus 로고
    • Paleoclimate changes during the last 100,000 yr from a record in the Brazilian Atlantic rainforest region and interhemispheric comparison
    • Ledru MP, Rousseau DD, Cruz FW, Riccomini C, Karmann I, Martin L (2005) Paleoclimate changes during the last 100, 000 yr from a record in the Brazilian Atlantic rainforest region and interhemispheric comparison. Quat Res 64(3): 444-450.
    • (2005) Quat Res , vol.64 , Issue.3 , pp. 444-450
    • Ledru, M.P.1    Rousseau, D.D.2    Cruz, F.W.3    Riccomini, C.4    Karmann, I.5    Martin, L.6
  • 48
    • 67449163699 scopus 로고    scopus 로고
    • The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference
    • Lemmon AR, Brown JM, Stanger-Hall K, Lemmon EM (2009) The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference. Syst Biol 58(1): 130-145.
    • (2009) Syst Biol , vol.58 , Issue.1 , pp. 130-145
    • Lemmon, A.R.1    Brown, J.M.2    Stanger-Hall, K.3    Lemmon, E.M.4
  • 49
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25(11): 1451-1452.
    • (2009) Bioinformatics , vol.25 , Issue.11 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 50
    • 84857960825 scopus 로고    scopus 로고
    • Climatic oscillations shape the phylogeographical structure of Atlantic Forest fire-eye antbirds (Aves: Thamnophilidae)
    • Maldonado-Coelho M (2012) Climatic oscillations shape the phylogeographical structure of Atlantic Forest fire-eye antbirds (Aves: Thamnophilidae). Biol J Linn Soc 105: 900-924.
    • (2012) Biol J Linn Soc , vol.105 , pp. 900-924
    • Maldonado-Coelho, M.1
  • 51
    • 78651227304 scopus 로고    scopus 로고
    • Coalescent analysis of mtDNA indicates Pleistocene divergence among three species of howler monkey (Alouatta spp.) and population subdivision within the Atlantic Coastal Forest species, A. guariba
    • Martins FM, Gifalli-Iughetti C, Koiffman C, Harris E (2011) Coalescent analysis of mtDNA indicates Pleistocene divergence among three species of howler monkey (Alouatta spp.) and population subdivision within the Atlantic Coastal Forest species, A. guariba. Primates 52(1): 77-87.
    • (2011) Primates , vol.52 , Issue.1 , pp. 77-87
    • Martins, F.M.1    Gifalli-Iughetti, C.2    Koiffman, C.3    Harris, E.4
  • 52
    • 69049105204 scopus 로고    scopus 로고
    • Molecular phylogeny and biogeography of the eastern Tapaculos (Aves: Rhinocryptidae: Scytalopus, Eleoscytalopus): cryptic diversification in Brazilian Atlantic Forest
    • Mata H, Fontana CS, Maurício GN, Bornschein MR, de Vasconcelos MF, Bonatto SL (2009) Molecular phylogeny and biogeography of the eastern Tapaculos (Aves: Rhinocryptidae: Scytalopus, Eleoscytalopus): cryptic diversification in Brazilian Atlantic Forest. Mol Phylogenet Evol 53(2): 450-462.
    • (2009) Mol Phylogenet Evol , vol.53 , Issue.2 , pp. 450-462
    • Mata, H.1    Fontana, C.S.2    Maurício, G.N.3    Bornschein, M.R.4    de Vasconcelos, M.F.5    Bonatto, S.L.6
  • 53
    • 45849122039 scopus 로고    scopus 로고
    • Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics
    • Minin VN, Bloomquist EW, Suchard MA (2008) Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics. Mol Biol Evol 25(7): 1459-1471.
    • (2008) Mol Biol Evol , vol.25 , Issue.7 , pp. 1459-1471
    • Minin, V.N.1    Bloomquist, E.W.2    Suchard, M.A.3
  • 55
    • 29444452921 scopus 로고    scopus 로고
    • Molecular signatures of natural selection
    • Nielsen R (2005) Molecular signatures of natural selection. Annu Rev Genet 39(1): 197-218.
    • (2005) Annu Rev Genet , vol.39 , Issue.1 , pp. 197-218
    • Nielsen, R.1
  • 56
    • 61649119281 scopus 로고    scopus 로고
    • Statistical inferences in phylogeography
    • Nielsen R, Beaumont MA (2009) Statistical inferences in phylogeography. Mol Ecol 18(6): 1034-1047.
    • (2009) Mol Ecol , vol.18 , Issue.6 , pp. 1034-1047
    • Nielsen, R.1    Beaumont, M.A.2
  • 57
    • 0034967295 scopus 로고    scopus 로고
    • Distinguishing migration from isolation: a Markov chain Monte Carlo approach
    • Nielsen R, Wakeley J (2001) Distinguishing migration from isolation: a Markov chain Monte Carlo approach. Genetics 158(2): 885-896.
    • (2001) Genetics , vol.158 , Issue.2 , pp. 885-896
    • Nielsen, R.1    Wakeley, J.2
  • 58
    • 34249734745 scopus 로고    scopus 로고
    • Phylogeographic patterns, molecular and vocal differentiation, and species limits in Schiffornis turdina (Aves)
    • Nyari AS (2007) Phylogeographic patterns, molecular and vocal differentiation, and species limits in Schiffornis turdina (Aves). Mol Phylogenet Evol 44(1): 154-164.
    • (2007) Mol Phylogenet Evol , vol.44 , Issue.1 , pp. 154-164
    • Nyari, A.S.1
  • 60
    • 56549106522 scopus 로고    scopus 로고
    • Comparative phylogeography of the Rufous Gnateater (Conopophagidae) and Lesser Woodcreeper (Dendrocolaptidae): congruent history of two passerines from the south American Atlantic forest
    • Pessoa RO, Cabanne GS, Sari EH, Santos FR, Miyaki CY (2006) Comparative phylogeography of the Rufous Gnateater (Conopophagidae) and Lesser Woodcreeper (Dendrocolaptidae): congruent history of two passerines from the south American Atlantic forest. J Ornithol 147(5): 227-228.
    • (2006) J Ornithol , vol.147 , Issue.5 , pp. 227-228
    • Pessoa, R.O.1    Cabanne, G.S.2    Sari, E.H.3    Santos, F.R.4    Miyaki, C.Y.5
  • 61
    • 78149423210 scopus 로고    scopus 로고
    • Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure
    • Peter BM, Wegmann D, Excoffier L (2010) Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure. Mol Ecol 19(21): 4648-4660.
    • (2010) Mol Ecol , vol.19 , Issue.21 , pp. 4648-4660
    • Peter, B.M.1    Wegmann, D.2    Excoffier, L.3
  • 63
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D, Crandall KA (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14(9): 817-818.
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 65
    • 27744586943 scopus 로고    scopus 로고
    • Historical biogeography and diversification within the Neotropical parrot genus Pionopsitta (Aves: Psittacidae)
    • Ribas CC, Gaban-Lima R, Miyaki CY, Cracraft J (2005) Historical biogeography and diversification within the Neotropical parrot genus Pionopsitta (Aves: Psittacidae). J Biogeogr 32(8): 1409-1427.
    • (2005) J Biogeogr , vol.32 , Issue.8 , pp. 1409-1427
    • Ribas, C.C.1    Gaban-Lima, R.2    Miyaki, C.Y.3    Cracraft, J.4
  • 66
    • 0347996147 scopus 로고    scopus 로고
    • Bird extinctions in Atlantic forest fragments of the Viçosa region, southeastern Brazil
    • Ribon R, Simon JE, De Mattos GT (2003) Bird extinctions in Atlantic forest fragments of the Viçosa region, southeastern Brazil. Conserv Biol 17(6): 1827-1839.
    • (2003) Conserv Biol , vol.17 , Issue.6 , pp. 1827-1839
    • Ribon, R.1    Simon, J.E.2    de Mattos, G.T.3
  • 67
    • 35348958892 scopus 로고    scopus 로고
    • Distribution modelling and statistical phylogeography: an integrative framework for generating and testing alternative biogeographical hypotheses
    • Richards CL, Carstens BC, Knowles LL (2007) Distribution modelling and statistical phylogeography: an integrative framework for generating and testing alternative biogeographical hypotheses. J Biogeogr 34(11): 1833-1845.
    • (2007) J Biogeogr , vol.34 , Issue.11 , pp. 1833-1845
    • Richards, C.L.1    Carstens, B.C.2    Knowles, L.L.3
  • 68
    • 36249028141 scopus 로고    scopus 로고
    • Estimating diversification rates from phylogenetic information
    • Ricklefs RE (2007) Estimating diversification rates from phylogenetic information. Trends Ecol Evol 22(11): 601-610.
    • (2007) Trends Ecol Evol , vol.22 , Issue.11 , pp. 601-610
    • Ricklefs, R.E.1
  • 70
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19(12): 1572-1574.
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 71
    • 33745055970 scopus 로고    scopus 로고
    • Climate change and the origin of migratory pathways in the Swainson's thrush, Catharus ustulatus
    • Ruegg KC, Hijmans RJ, Moritz C (2006) Climate change and the origin of migratory pathways in the Swainson's thrush, Catharus ustulatus. J Biogeogr 33(7): 1172-1182.
    • (2006) J Biogeogr , vol.33 , Issue.7 , pp. 1172-1182
    • Ruegg, K.C.1    Hijmans, R.J.2    Moritz, C.3
  • 72
    • 84863432345 scopus 로고    scopus 로고
    • The latitudinal gradient in dispersal constraints: ecological specialization drives diversification in tropical birds
    • Salisbury CL, Seddon N, Cooney CR, Tobias JA (2012) The latitudinal gradient in dispersal constraints: ecological specialization drives diversification in tropical birds. Ecol Lett 15: 847-855.
    • (2012) Ecol Lett , vol.15 , pp. 847-855
    • Salisbury, C.L.1    Seddon, N.2    Cooney, C.R.3    Tobias, J.A.4
  • 74
    • 0024313579 scopus 로고
    • Statistical-method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F (1989) Statistical-method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123(3): 585-595.
    • (1989) Genetics , vol.123 , Issue.3 , pp. 585-595
    • Tajima, F.1
  • 76
    • 29444451610 scopus 로고    scopus 로고
    • Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes
    • Voight BF, Adams AM, Frisse LA, Qian Y, Hudson RR, Di Rienzo A (2005) Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes. Proc Natl Acad Sci USA 102(51): 18508-18513.
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.51 , pp. 18508-18513
    • Voight, B.F.1    Adams, A.M.2    Frisse, L.A.3    Qian, Y.4    Hudson, R.R.5    di Rienzo, A.6
  • 77
    • 1842815250 scopus 로고    scopus 로고
    • Application of the one-migrant-per-generation rule to conservation and management
    • Wang JL (2004) Application of the one-migrant-per-generation rule to conservation and management. Conserv Biol 18(2): 332-343.
    • (2004) Conserv Biol , vol.18 , Issue.2 , pp. 332-343
    • Wang, J.L.1
  • 78
    • 43049101093 scopus 로고    scopus 로고
    • Calibrating the avian molecular clock
    • Weir JT, Schluter D (2008) Calibrating the avian molecular clock. Mol Ecol 17(10): 2321-2328.
    • (2008) Mol Ecol , vol.17 , Issue.10 , pp. 2321-2328
    • Weir, J.T.1    Schluter, D.2
  • 79
  • 80
    • 34547737972 scopus 로고    scopus 로고
    • Compound tests for the detection of hitchhiking under positive selection
    • Zeng K, Shi S, Wut CI (2007) Compound tests for the detection of hitchhiking under positive selection. Mol Biol Evol 24(8): 1898-1908.
    • (2007) Mol Biol Evol , vol.24 , Issue.8 , pp. 1898-1908
    • Zeng, K.1    Shi, S.2    Wut, C.I.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.