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Volumn 12, Issue 3, 2013, Pages 1300-1315

Proteome reference map of haloarcula hispanica and comparative proteomic and transcriptomic analysis of polyhydroxyalkanoate biosynthesis under genetic and environmental perturbations

Author keywords

2 DE; haloarchaea; polyhydroxyalkanoates; urea cycle

Indexed keywords

CARBON; MALIC ACID; POLYHYDROXYALKANOATE SYNTHASE; POLYHYDROXYALKANOIC ACID; PYRUVIC ACID;

EID: 84874639009     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr300969m     Document Type: Article
Times cited : (13)

References (74)
  • 1
    • 0001271789 scopus 로고
    • Phylogenetic structure of the prokaryotic domain: The primary kingdoms
    • Woese, C. R.; Fox, G. E. Phylogenetic structure of the prokaryotic domain: the primary kingdoms Proc. Natl. Acad. Sci. U.S.A. 1977, 74 (11) 5088-5090
    • (1977) Proc. Natl. Acad. Sci. U.S.A. , vol.74 , Issue.11 , pp. 5088-5090
    • Woese, C.R.1    Fox, G.E.2
  • 3
    • 33745973936 scopus 로고    scopus 로고
    • Production of polyhydroxyalkanoates from inexpensive extruded rice bran and starch by Haloferax mediterranei
    • Huang, T. Y.; Duan, K. J.; Huang, S. Y.; Chen, C. W. Production of polyhydroxyalkanoates from inexpensive extruded rice bran and starch by Haloferax mediterranei J. Ind. Microbiol. Biotechnol. 2006, 33 (8) 701-706
    • (2006) J. Ind. Microbiol. Biotechnol. , vol.33 , Issue.8 , pp. 701-706
    • Huang, T.Y.1    Duan, K.J.2    Huang, S.Y.3    Chen, C.W.4
  • 4
    • 0026707609 scopus 로고
    • Biotechnology of the Archaea
    • Cowan, D. A. Biotechnology of the Archaea Trends Biotechnol. 1992, 10 (9) 315-323
    • (1992) Trends Biotechnol. , vol.10 , Issue.9 , pp. 315-323
    • Cowan, D.A.1
  • 5
    • 0003146009 scopus 로고
    • Haloarcula hispanica spec. nov. and Haloferax gibbonsii spec. nov., two new species of extremely halophilic archaebacteria
    • Juez, G.; Rodriguezvalera, F.; Ventosa, A.; Kushner, D. J. Haloarcula hispanica spec. nov. and Haloferax gibbonsii spec. nov., two new species of extremely halophilic archaebacteria Syst. Appl. Microbiol. 1986, 8 (1-2) 75-79
    • (1986) Syst. Appl. Microbiol. , vol.8 , Issue.1-2 , pp. 75-79
    • Juez, G.1    Rodriguezvalera, F.2    Ventosa, A.3    Kushner, D.J.4
  • 6
    • 44949083652 scopus 로고    scopus 로고
    • Genetic and biochemical characterization of the poly(3-hydroxybutyrate- co -3-hydroxyvalerate) synthase in Haloferax mediterranei
    • Lu, Q.; Han, J.; Zhou, L.; Zhou, J.; Xiang, H. Genetic and biochemical characterization of the poly(3-hydroxybutyrate- co -3-hydroxyvalerate) synthase in Haloferax mediterranei J. Bacteriol. 2008, 190 (12) 4173-4180
    • (2008) J. Bacteriol. , vol.190 , Issue.12 , pp. 4173-4180
    • Lu, Q.1    Han, J.2    Zhou, L.3    Zhou, J.4    Xiang, H.5
  • 7
    • 4544314878 scopus 로고    scopus 로고
    • Metabolic engineering and pathway construction for biotechnological production of relevant polyhydroxyalkanoates in microorganisms
    • Steinbüchel, A.; Lütke-Eversloh, T. Metabolic engineering and pathway construction for biotechnological production of relevant polyhydroxyalkanoates in microorganisms Biochem. Eng. J. 2003, 16 (2) 81-96
    • (2003) Biochem. Eng. J. , vol.16 , Issue.2 , pp. 81-96
    • Steinbüchel, A.1    Lütke-Eversloh, T.2
  • 8
    • 35148828068 scopus 로고    scopus 로고
    • Hm genes, required for biosynthesis of poly(3-hydroxybutyrate) in the extremely halophilic archaeon Haloarcula marismortui
    • Hm genes, required for biosynthesis of poly(3-hydroxybutyrate) in the extremely halophilic archaeon Haloarcula marismortui Appl. Environ. Microbiol. 2007, 73 (19) 6058-6065
    • (2007) Appl. Environ. Microbiol. , vol.73 , Issue.19 , pp. 6058-6065
    • Han, J.1    Lu, Q.2    Zhou, L.3    Zhou, J.4    Xiang, H.5
  • 9
    • 43049088078 scopus 로고    scopus 로고
    • Isolation and purification of bacterial poly (3-hydroxyalkanoates)
    • Jacquel, N.; Lo, C. W.; Wei, Y. H.; Wu, H. S.; Wang, S. S. Isolation and purification of bacterial poly (3-hydroxyalkanoates) Biochem. Eng. J. 2008, 39 (1) 15-27
    • (2008) Biochem. Eng. J. , vol.39 , Issue.1 , pp. 15-27
    • Jacquel, N.1    Lo, C.W.2    Wei, Y.H.3    Wu, H.S.4    Wang, S.S.5
  • 10
    • 0042344160 scopus 로고    scopus 로고
    • Bacterial and other biological systems for polyester production
    • Steinbüchel, A.; Füchtenbusch, B. Bacterial and other biological systems for polyester production Trends Biotechnol. 1998, 16 (10) 419-427
    • (1998) Trends Biotechnol. , vol.16 , Issue.10 , pp. 419-427
    • Steinbüchel, A.1    Füchtenbusch, B.2
  • 12
    • 0002473164 scopus 로고
    • The role of NADH-linked and NADPH-linked acetoacetyl-CoA reductases in the poly-3-hydroxybutyrate synthesizing organism Alcaligenes eutrophus
    • Haywood, G. W.; Anderson, A. J.; Chu, L.; Dawes, E. A. The role of NADH-linked and NADPH-linked acetoacetyl-CoA reductases in the poly-3-hydroxybutyrate synthesizing organism Alcaligenes eutrophus FEMS Microbiol. Lett. 1988, 52 (3) 259-264
    • (1988) FEMS Microbiol. Lett. , vol.52 , Issue.3 , pp. 259-264
    • Haywood, G.W.1    Anderson, A.J.2    Chu, L.3    Dawes, E.A.4
  • 13
    • 0030859801 scopus 로고    scopus 로고
    • Poly-3-hydroxybutyrate production by washed cells of Alcaligenes eutrophus; Purification, characterisation and potential regulatory role of citrate synthase
    • Henderson, R. A.; Jones, C. W. Poly-3-hydroxybutyrate production by washed cells of Alcaligenes eutrophus; purification, characterisation and potential regulatory role of citrate synthase Arch. Microbiol. 1997, 168 (6) 486-492
    • (1997) Arch. Microbiol. , vol.168 , Issue.6 , pp. 486-492
    • Henderson, R.A.1    Jones, C.W.2
  • 14
    • 34250334306 scopus 로고    scopus 로고
    • The phosphotransferase system formed by PtsP, PtsO, and PtsN proteins controls production of polyhydroxyalkanoates in Pseudomonas putida
    • Velázquez, F.; Pflüger, K.; Cases, I.; De Eugenio, L. I.; de Lorenzo, V. The phosphotransferase system formed by PtsP, PtsO, and PtsN proteins controls production of polyhydroxyalkanoates in Pseudomonas putida J. Bacteriol. 2007, 189 (12) 4529-4533
    • (2007) J. Bacteriol. , vol.189 , Issue.12 , pp. 4529-4533
    • Velázquez, F.1    Pflüger, K.2    Cases, I.3    De Eugenio, L.I.4    De Lorenzo, V.5
  • 15
    • 0026601481 scopus 로고
    • Pseudomonas putida KT2442 cultivated on glucose accumulates poly(3-hydroxyalkanoates) consisting of saturated and unsaturated monomers
    • Huijberts, G. N.; Eggink, G.; de Waard, P.; Huisman, G. W.; Witholt, B. Pseudomonas putida KT2442 cultivated on glucose accumulates poly(3- hydroxyalkanoates) consisting of saturated and unsaturated monomers Appl. Environ. Microbiol. 1992, 58 (2) 536-544
    • (1992) Appl. Environ. Microbiol. , vol.58 , Issue.2 , pp. 536-544
    • Huijberts, G.N.1    Eggink, G.2    De Waard, P.3    Huisman, G.W.4    Witholt, B.5
  • 16
    • 0033987850 scopus 로고    scopus 로고
    • The ntrB and ntrC genes are involved in the regulation of poly-3-hydroxybutyrate biosynthesis by ammonia in Azospirillum brasilense Sp7
    • Sun, J.; Peng, X.; Van Impe, J.; Vanderleyden, J. The ntrB and ntrC genes are involved in the regulation of poly-3-hydroxybutyrate biosynthesis by ammonia in Azospirillum brasilense Sp7 Appl. Environ. Microbiol. 2000, 66 (1) 113-117
    • (2000) Appl. Environ. Microbiol. , vol.66 , Issue.1 , pp. 113-117
    • Sun, J.1    Peng, X.2    Van Impe, J.3    Vanderleyden, J.4
  • 17
    • 0036151708 scopus 로고    scopus 로고
    • Involvement of glnB, glnZ, and glnD genes in the regulation of poly-3-hydroxybutyrate biosynthesis by ammonia in Azospirillum brasilense Sp7
    • Sun, J.; Van Dommelen, A.; Van Impe, J.; Vanderleyden, J. Involvement of glnB, glnZ, and glnD genes in the regulation of poly-3-hydroxybutyrate biosynthesis by ammonia in Azospirillum brasilense Sp7 Appl. Environ. Microbiol. 2002, 68 (2) 985-988
    • (2002) Appl. Environ. Microbiol. , vol.68 , Issue.2 , pp. 985-988
    • Sun, J.1    Van Dommelen, A.2    Van Impe, J.3    Vanderleyden, J.4
  • 18
    • 33947520496 scopus 로고    scopus 로고
    • Potential of various archae- and eubacterial strains as industrial polyhydroxyalkanoate producers from whey
    • Koller, M.; Hesse, P.; Bona, R.; Kutschera, C.; Atlic, A.; Braunegg, G. Potential of various archae- and eubacterial strains as industrial polyhydroxyalkanoate producers from whey Macromol. Biosci. 2007, 7 (2) 218-226
    • (2007) Macromol. Biosci. , vol.7 , Issue.2 , pp. 218-226
    • Koller, M.1    Hesse, P.2    Bona, R.3    Kutschera, C.4    Atlic, A.5    Braunegg, G.6
  • 19
    • 33845261194 scopus 로고    scopus 로고
    • Preparation and characterization of poly(hydroxyalkanoate) from the fermentation of Haloferax mediterranei
    • Don, T. M.; Chen, C. W.; Chan, T. H. Preparation and characterization of poly(hydroxyalkanoate) from the fermentation of Haloferax mediterranei J. Biomater. Sci., Polym. Ed. 2006, 17 (12) 1425-1438
    • (2006) J. Biomater. Sci., Polym. Ed. , vol.17 , Issue.12 , pp. 1425-1438
    • Don, T.M.1    Chen, C.W.2    Chan, T.H.3
  • 20
    • 70349433656 scopus 로고    scopus 로고
    • Identification of the polyhydroxyalkanoate (PHA)-specific acetoacetyl coenzyme A reductase among multiple FabG paralogs in Haloarcula hispanica and reconstruction of the PHA biosynthetic pathway in Haloferax volcanii
    • Han, J.; Lu, Q.; Zhou, L.; Liu, H.; Xiang, H. Identification of the polyhydroxyalkanoate (PHA)-specific acetoacetyl coenzyme A reductase among multiple FabG paralogs in Haloarcula hispanica and reconstruction of the PHA biosynthetic pathway in Haloferax volcanii Appl. Environ. Microbiol. 2009, 75 (19) 6168-6175
    • (2009) Appl. Environ. Microbiol. , vol.75 , Issue.19 , pp. 6168-6175
    • Han, J.1    Lu, Q.2    Zhou, L.3    Liu, H.4    Xiang, H.5
  • 21
    • 80055040713 scopus 로고    scopus 로고
    • Complete genome sequence of Haloarcula hispanica, a model haloarchaeon for studying genetics, metabolism, and virus-host interaction
    • Liu, H.; Wu, Z.; Li, M.; Zhang, F.; Zheng, H.; Han, J.; Liu, J.; Zhou, J.; Wang, S.; Xiang, H. Complete genome sequence of Haloarcula hispanica, a model haloarchaeon for studying genetics, metabolism, and virus-host interaction J. Bacteriol. 2011, 193 (21) 6086-6087
    • (2011) J. Bacteriol. , vol.193 , Issue.21 , pp. 6086-6087
    • Liu, H.1    Wu, Z.2    Li, M.3    Zhang, F.4    Zheng, H.5    Han, J.6    Liu, J.7    Zhou, J.8    Wang, S.9    Xiang, H.10
  • 22
    • 79959374305 scopus 로고    scopus 로고
    • Development of pyrF -based gene knockout systems for genome-wide manipulation of the archaea Haloferax mediterranei and Haloarcula hispanica
    • Liu, H.; Han, J.; Liu, X.; Zhou, J.; Xiang, H. Development of pyrF -based gene knockout systems for genome-wide manipulation of the archaea Haloferax mediterranei and Haloarcula hispanica J. Genet. Genomics 2011, 38 (6) 261-269
    • (2011) J. Genet. Genomics , vol.38 , Issue.6 , pp. 261-269
    • Liu, H.1    Han, J.2    Liu, X.3    Zhou, J.4    Xiang, H.5
  • 24
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher, V. G.; Tibshirani, R.; Chu, G. Significance analysis of microarrays applied to the ionizing radiation response Proc. Natl. Acad. Sci. U.S.A. 2001, 98 (9) 5116-5121
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , Issue.9 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 25
    • 33645291760 scopus 로고    scopus 로고
    • Trizol-based method for sample preparation and isoelectric focusing of halophilic proteins
    • Kirkland, P. A.; Busby, J.; Stevens, S.; Maupin-Furlow, J. A. Trizol-based method for sample preparation and isoelectric focusing of halophilic proteins Anal. Biochem. 2006, 351 (2) 254-259
    • (2006) Anal. Biochem. , vol.351 , Issue.2 , pp. 254-259
    • Kirkland, P.A.1    Busby, J.2    Stevens, S.3    Maupin-Furlow, J.A.4
  • 26
    • 0347517821 scopus 로고    scopus 로고
    • Improvement of the two-dimensional gel electrophoresis analysis for the proteome study of Halobacterium salinarum
    • Cho, C. W.; Lee, S. H.; Choi, J.; Park, S. J.; Ha, D. J.; Kim, H. J.; Kim, C. W. Improvement of the two-dimensional gel electrophoresis analysis for the proteome study of Halobacterium salinarum Proteomics 2003, 3 (12) 2325-2329
    • (2003) Proteomics , vol.3 , Issue.12 , pp. 2325-2329
    • Cho, C.W.1    Lee, S.H.2    Choi, J.3    Park, S.J.4    Ha, D.J.5    Kim, H.J.6    Kim, C.W.7
  • 27
    • 84863229520 scopus 로고    scopus 로고
    • Identification of the haloarchaeal phasin (PhaP) that functions in polyhydroxyalkanoate accumulation and granule formation in Haloferax mediterranei
    • Cai, S.; Cai, L.; Liu, H.; Liu, X.; Han, J.; Zhou, J.; Xiang, H. Identification of the haloarchaeal phasin (PhaP) that functions in polyhydroxyalkanoate accumulation and granule formation in Haloferax mediterranei Appl. Environ. Microbiol. 2012, 78 (6) 1946-1952
    • (2012) Appl. Environ. Microbiol. , vol.78 , Issue.6 , pp. 1946-1952
    • Cai, S.1    Cai, L.2    Liu, H.3    Liu, X.4    Han, J.5    Zhou, J.6    Xiang, H.7
  • 28
    • 77954604280 scopus 로고    scopus 로고
    • Proteome reference map and comparative proteomic analysis between a wild type Clostridium acetobutylicum DSM 1731 and its mutant with enhanced butanol tolerance and butanol yield
    • Mao, S.; Luo, Y.; Zhang, T.; Li, J.; Bao, G.; Zhu, Y.; Chen, Z.; Zhang, Y.; Li, Y.; Ma, Y. Proteome reference map and comparative proteomic analysis between a wild type Clostridium acetobutylicum DSM 1731 and its mutant with enhanced butanol tolerance and butanol yield J. Proteome Res. 2010, 9 (6) 3046-3061
    • (2010) J. Proteome Res. , vol.9 , Issue.6 , pp. 3046-3061
    • Mao, S.1    Luo, Y.2    Zhang, T.3    Li, J.4    Bao, G.5    Zhu, Y.6    Chen, Z.7    Zhang, Y.8    Li, Y.9    Ma, Y.10
  • 29
    • 34548178909 scopus 로고    scopus 로고
    • In-gel digestion for mass spectrometric characterization of proteins and proteomes
    • Shevchenko, A.; Tomas, H.; Havlis, J.; Olsen, J. V.; Mann, M. In-gel digestion for mass spectrometric characterization of proteins and proteomes Nat. Protoc. 2006, 1 (6) 2856-2860
    • (2006) Nat. Protoc. , vol.1 , Issue.6 , pp. 2856-2860
    • Shevchenko, A.1    Tomas, H.2    Havlis, J.3    Olsen, J.V.4    Mann, M.5
  • 32
    • 10644230916 scopus 로고    scopus 로고
    • Current two-dimensional electrophoresis technology for proteomics
    • Gorg, A.; Weiss, W.; Dunn, M. J. Current two-dimensional electrophoresis technology for proteomics Proteomics 2004, 4 (12) 3665-3685
    • (2004) Proteomics , vol.4 , Issue.12 , pp. 3665-3685
    • Gorg, A.1    Weiss, W.2    Dunn, M.J.3
  • 35
    • 13844307729 scopus 로고    scopus 로고
    • Improvement of two-dimensional gel electrophoresis proteome maps of the haloarchaeon Haloferax volcanii
    • Karadzic, I. M.; Maupin-Furlow, J. A. Improvement of two-dimensional gel electrophoresis proteome maps of the haloarchaeon Haloferax volcanii Proteomics 2005, 5 (2) 354-359
    • (2005) Proteomics , vol.5 , Issue.2 , pp. 354-359
    • Karadzic, I.M.1    Maupin-Furlow, J.A.2
  • 38
    • 8744225397 scopus 로고    scopus 로고
    • Identification and characterization of inosine monophosphate dehydrogenase from Halobacterium salinarum
    • Park, S. J.; Joo, W. A.; Choi, J.; Lee, S. H.; Kim, C. W. Identification and characterization of inosine monophosphate dehydrogenase from Halobacterium salinarum Proteomics 2004, 4 (11) 3632-3641
    • (2004) Proteomics , vol.4 , Issue.11 , pp. 3632-3641
    • Park, S.J.1    Joo, W.A.2    Choi, J.3    Lee, S.H.4    Kim, C.W.5
  • 39
    • 16344394996 scopus 로고    scopus 로고
    • An efficient proteomics based strategy for the functional characterization of a novel halophilic enzyme from Halobacterium salinarum
    • Choi, J.; Joo, W. A.; Park, S. J.; Lee, S. H.; Kim, C. W. An efficient proteomics based strategy for the functional characterization of a novel halophilic enzyme from Halobacterium salinarum Proteomics 2005, 5 (4) 907-917
    • (2005) Proteomics , vol.5 , Issue.4 , pp. 907-917
    • Choi, J.1    Joo, W.A.2    Park, S.J.3    Lee, S.H.4    Kim, C.W.5
  • 40
    • 0033956060 scopus 로고    scopus 로고
    • The COG database: A tool for genome-scale analysis of protein functions and evolution
    • Tatusov, R. L.; Galperin, M. Y.; Natale, D. A.; Koonin, E. V. The COG database: a tool for genome-scale analysis of protein functions and evolution Nucleic Acids Res. 2000, 28 (1) 33-36
    • (2000) Nucleic Acids Res. , vol.28 , Issue.1 , pp. 33-36
    • Tatusov, R.L.1    Galperin, M.Y.2    Natale, D.A.3    Koonin, E.V.4
  • 41
    • 80051822783 scopus 로고    scopus 로고
    • Proteome reference map of Lactobacillus acidophilus NCFM and quantitative proteomics towards understanding the prebiotic action of lactitol
    • Majumder, A.; Sultan, A.; Jersie-Christensen, R. R.; Ejby, M.; Schmidt, B. G.; Lahtinen, S. J.; Jacobsen, S.; Svensson, B. Proteome reference map of Lactobacillus acidophilus NCFM and quantitative proteomics towards understanding the prebiotic action of lactitol Proteomics 2011, 11 (17) 3470-3481
    • (2011) Proteomics , vol.11 , Issue.17 , pp. 3470-3481
    • Majumder, A.1    Sultan, A.2    Jersie-Christensen, R.R.3    Ejby, M.4    Schmidt, B.G.5    Lahtinen, S.J.6    Jacobsen, S.7    Svensson, B.8
  • 43
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of a protein
    • Kyte, J.; Doolittle, R. F. A simple method for displaying the hydropathic character of a protein J. Mol. Biol. 1982, 157 (1) 105-132
    • (1982) J. Mol. Biol. , vol.157 , Issue.1 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 44
    • 27144533653 scopus 로고    scopus 로고
    • Reconstructing the metabolic network of a bacterium from its genome
    • Francke, C.; Siezen, R. J.; Teusink, B. Reconstructing the metabolic network of a bacterium from its genome Trends Microbiol. 2005, 13 (11) 550-558
    • (2005) Trends Microbiol. , vol.13 , Issue.11 , pp. 550-558
    • Francke, C.1    Siezen, R.J.2    Teusink, B.3
  • 48
    • 0032912473 scopus 로고    scopus 로고
    • Amino acid biosynthesis in the halophilic archaeon Haloarcula hispanica
    • Hochuli, M.; Patzelt, H.; Oesterhelt, D.; Wuthrich, K.; Szyperski, T. Amino acid biosynthesis in the halophilic archaeon Haloarcula hispanica J. Bacteriol. 1999, 181 (10) 3226-3237
    • (1999) J. Bacteriol. , vol.181 , Issue.10 , pp. 3226-3237
    • Hochuli, M.1    Patzelt, H.2    Oesterhelt, D.3    Wuthrich, K.4    Szyperski, T.5
  • 50
    • 0023749235 scopus 로고
    • Pseudomonas oleovorans as a source of poly(β-Hydroxyalkanoates) for potential applications as biodegradable polyesters
    • Brandl, H.; Gross, R. A.; Lenz, R. W.; Fuller, R. C. Pseudomonas oleovorans as a source of poly(β-Hydroxyalkanoates) for potential applications as biodegradable polyesters Appl. Environ. Microbiol. 1988, 54 (8) 1977-1982
    • (1988) Appl. Environ. Microbiol. , vol.54 , Issue.8 , pp. 1977-1982
    • Brandl, H.1    Gross, R.A.2    Lenz, R.W.3    Fuller, R.C.4
  • 51
    • 0032508549 scopus 로고    scopus 로고
    • A new metabolic link between fatty acid de novo synthesis and polyhydroxyalkanoic acid synthesis
    • Rehm, B. H.; Kruger, N.; Steinbuchel, A. A new metabolic link between fatty acid de novo synthesis and polyhydroxyalkanoic acid synthesis J. Biol. Chem. 1998, 273 (37) 24044-24051
    • (1998) J. Biol. Chem. , vol.273 , Issue.37 , pp. 24044-24051
    • Rehm, B.H.1    Kruger, N.2    Steinbuchel, A.3
  • 52
    • 0345688125 scopus 로고    scopus 로고
    • Polyester synthases: Natural catalysts for plastics
    • Rehm, B. H. Polyester synthases: natural catalysts for plastics Biochem. J. 2003, 376 (Pt 1) 15-33
    • (2003) Biochem. J. , vol.376 , Issue.PART 1 , pp. 15-33
    • Rehm, B.H.1
  • 53
    • 79952279310 scopus 로고    scopus 로고
    • Identification of the phaB genes and analysis of the PHBV precursor supplying pathway in Haloferax mediterranei
    • Feng, B.; Cai, S.; Han, J.; Liu, H.; Zhou, J.; Xiang, H. Identification of the phaB genes and analysis of the PHBV precursor supplying pathway in Haloferax mediterranei Acta Microbiol. Sin. 2010, 50 (10) 1305-1312
    • (2010) Acta Microbiol. Sin. , vol.50 , Issue.10 , pp. 1305-1312
    • Feng, B.1    Cai, S.2    Han, J.3    Liu, H.4    Zhou, J.5    Xiang, H.6
  • 54
    • 77954616682 scopus 로고    scopus 로고
    • Genome-wide transcriptome analyses of the 'Knallgas' bacterium Ralstonia eutropha H16 with regard to polyhydroxyalkanoate metabolism
    • Peplinski, K.; Ehrenreich, A.; Döring, C.; Bömeke, M.; Reinecke, F.; Hutmacher, C.; Steinbüchel, A. Genome-wide transcriptome analyses of the 'Knallgas' bacterium Ralstonia eutropha H16 with regard to polyhydroxyalkanoate metabolism Microbiology 2010, 156 (Pt 7) 2136-2152
    • (2010) Microbiology , vol.156 , Issue.PART 7 , pp. 2136-2152
    • Peplinski, K.1    Ehrenreich, A.2    Döring, C.3    Bömeke, M.4    Reinecke, F.5    Hutmacher, C.6    Steinbüchel, A.7
  • 55
    • 0035167677 scopus 로고    scopus 로고
    • Polyhydroxyalkanoate degradation is associated with nucleotide accumulation and enhances stress resistance and survival of Pseudomonas oleovorans in natural water microcosms
    • Ruiz, J. A.; López, N. I.; Fernández, R. O.; Méndez, B. S. Polyhydroxyalkanoate degradation is associated with nucleotide accumulation and enhances stress resistance and survival of Pseudomonas oleovorans in natural water microcosms Appl. Environ. Microbiol. 2001, 67 (1) 225-230
    • (2001) Appl. Environ. Microbiol. , vol.67 , Issue.1 , pp. 225-230
    • Ruiz, J.A.1    López, N.I.2    Fernández, R.O.3    Méndez, B.S.4
  • 56
    • 77956320089 scopus 로고    scopus 로고
    • Quantitative proteome and transcriptome analysis of the archaeon Thermoplasma acidophilum cultured under aerobic and anaerobic conditions
    • Sun, N.; Pan, C.; Nickell, S.; Mann, M.; Baumeister, W.; Nagy, I. Quantitative proteome and transcriptome analysis of the archaeon Thermoplasma acidophilum cultured under aerobic and anaerobic conditions J. Proteome Res. 2010, 9 (9) 4839-4850
    • (2010) J. Proteome Res. , vol.9 , Issue.9 , pp. 4839-4850
    • Sun, N.1    Pan, C.2    Nickell, S.3    Mann, M.4    Baumeister, W.5    Nagy, I.6
  • 57
    • 0042932494 scopus 로고    scopus 로고
    • In silico prediction and validation of the importance of the Entner-Doudoroff pathway in poly(3-hydroxybutyrate) production by metabolically engineered Escherichia coli
    • Hong, S. H.; Park, S. J.; Moon, S. Y.; Park, J. P.; Lee, S. Y. In silico prediction and validation of the importance of the Entner-Doudoroff pathway in poly(3-hydroxybutyrate) production by metabolically engineered Escherichia coli Biotechnol. Bioeng. 2003, 83 (7) 854-863
    • (2003) Biotechnol. Bioeng. , vol.83 , Issue.7 , pp. 854-863
    • Hong, S.H.1    Park, S.J.2    Moon, S.Y.3    Park, J.P.4    Lee, S.Y.5
  • 58
    • 0015150016 scopus 로고
    • Poly-β-hydroxybutyrate biosynthesis and the regulation of glucose metabolism in Azotobacter beijerinckii
    • Senior, P. J.; Dawes, E. A. Poly-β-hydroxybutyrate biosynthesis and the regulation of glucose metabolism in Azotobacter beijerinckii Biochem. J. 1971, 125 (1) 55-66
    • (1971) Biochem. J. , vol.125 , Issue.1 , pp. 55-66
    • Senior, P.J.1    Dawes, E.A.2
  • 59
    • 0013674971 scopus 로고    scopus 로고
    • Regulatory effects of cellular nicotinamide nucleotides and enzyme activities on poly(3-hydroxybutyrate) synthesis in recombinant Escherichia coli
    • Lee, I. Y.; Kim, M. K.; Park, Y. H.; Lee, S. Y. Regulatory effects of cellular nicotinamide nucleotides and enzyme activities on poly(3- hydroxybutyrate) synthesis in recombinant Escherichia coli Biotechnol. Bioeng. 1996, 52 (6) 707-712
    • (1996) Biotechnol. Bioeng. , vol.52 , Issue.6 , pp. 707-712
    • Lee, I.Y.1    Kim, M.K.2    Park, Y.H.3    Lee, S.Y.4
  • 61
    • 0035970990 scopus 로고    scopus 로고
    • Factors involved in the regulatory network of polyhydroxyalkanoate metabolism
    • Kessler, B.; Witholt, B. Factors involved in the regulatory network of polyhydroxyalkanoate metabolism J. Biotechnol. 2001, 86 (2) 97-104
    • (2001) J. Biotechnol. , vol.86 , Issue.2 , pp. 97-104
    • Kessler, B.1    Witholt, B.2
  • 62
    • 35448984675 scopus 로고    scopus 로고
    • Nitrogen regulation in bacteria and archaea
    • Leigh, J. A.; Dodsworth, J. A. Nitrogen regulation in bacteria and archaea Annu. Rev. Microbiol. 2007, 61, 349-377
    • (2007) Annu. Rev. Microbiol. , vol.61 , pp. 349-377
    • Leigh, J.A.1    Dodsworth, J.A.2
  • 63
    • 33947277700 scopus 로고    scopus 로고
    • Nitrogen control in Corynebacterium glutamicum: Proteins, mechanisms, signals
    • Burkovski, A. Nitrogen control in Corynebacterium glutamicum: proteins, mechanisms, signals J. Microbiol. Biotechnol. 2007, 17 (2) 187-194
    • (2007) J. Microbiol. Biotechnol. , vol.17 , Issue.2 , pp. 187-194
    • Burkovski, A.1
  • 64
    • 0028216044 scopus 로고
    • 13C nuclear magnetic resonance spectroscopy
    • 13C nuclear magnetic resonance spectroscopy J. Bacteriol. 1994, 176 (8) 2172-2176
    • (1994) J. Bacteriol. , vol.176 , Issue.8 , pp. 2172-2176
    • Bhaumik, S.R.1    Sonawat, H.M.2
  • 65
    • 0021288013 scopus 로고
    • Unusual C3 and C4 metabolism in the chemoautotroph Alcaligenes eutrophus
    • Schobert, P.; Bowien, B. Unusual C3 and C4 metabolism in the chemoautotroph Alcaligenes eutrophus J. Bacteriol. 1984, 159 (1) 167-172
    • (1984) J. Bacteriol. , vol.159 , Issue.1 , pp. 167-172
    • Schobert, P.1    Bowien, B.2
  • 66
    • 4043061367 scopus 로고    scopus 로고
    • Metabolic carbon fluxes and biosynthesis of polyhydroxyalkanoates in Ralstonia eutropha on short chain fatty acids
    • Yu, J.; Si, Y. Metabolic carbon fluxes and biosynthesis of polyhydroxyalkanoates in Ralstonia eutropha on short chain fatty acids Biotechnol. Prog. 2004, 20 (4) 1015-1024
    • (2004) Biotechnol. Prog. , vol.20 , Issue.4 , pp. 1015-1024
    • Yu, J.1    Si, Y.2
  • 67
    • 0038000608 scopus 로고    scopus 로고
    • N -acetylglutamate and its changing role through evolution
    • Caldovic, L.; Tuchman, M. N -acetylglutamate and its changing role through evolution Biochem. J. 2003, 372 (Pt 2) 279-290
    • (2003) Biochem. J. , vol.372 , Issue.PART 2 , pp. 279-290
    • Caldovic, L.1    Tuchman, M.2
  • 68
    • 71049157543 scopus 로고    scopus 로고
    • Analysis of the Pseudomonas putida CA-3 proteome during growth on styrene under nitrogen-limiting and non-limiting conditions
    • Nikodinovic-Runic, J.; Flanagan, M.; Hume, A. R.; Cagney, G.; O'Connor, K. E. Analysis of the Pseudomonas putida CA-3 proteome during growth on styrene under nitrogen-limiting and non-limiting conditions Microbiology 2009, 155 (Pt 10) 3348-3361
    • (2009) Microbiology , vol.155 , Issue.PART 10 , pp. 3348-3361
    • Nikodinovic-Runic, J.1    Flanagan, M.2    Hume, A.R.3    Cagney, G.4    O'Connor, K.E.5
  • 69
    • 37549056553 scopus 로고    scopus 로고
    • Transcriptome analysis of Pseudomonas putida in response to nitrogen availability
    • Hervas, A. B.; Canosa, I.; Santero, E. Transcriptome analysis of Pseudomonas putida in response to nitrogen availability J. Bacteriol. 2008, 190 (1) 416-420
    • (2008) J. Bacteriol. , vol.190 , Issue.1 , pp. 416-420
    • Hervas, A.B.1    Canosa, I.2    Santero, E.3
  • 70
    • 84859432691 scopus 로고    scopus 로고
    • The polyhydroxyalkanoate metabolism controls carbon and energy spillage in Pseudomonas putida
    • Escapa, I. F.; García, J. L.; Bühler, B.; Blank, L. M.; Prieto, M. A. The polyhydroxyalkanoate metabolism controls carbon and energy spillage in Pseudomonas putida Environ. Microbiol. 2012, 14 (4) 1049-1063
    • (2012) Environ. Microbiol. , vol.14 , Issue.4 , pp. 1049-1063
    • Escapa, I.F.1    García, J.L.2    Bühler, B.3    Blank, L.M.4    Prieto, M.A.5
  • 71
    • 58449097916 scopus 로고    scopus 로고
    • NAD biosynthesis evolution in bacteria: Lateral gene transfer of kynurenine pathway in Xanthomonadales and Flavobacteriales
    • Lima, W. C.; Varani, A. M.; Menck, C. F. NAD biosynthesis evolution in bacteria: lateral gene transfer of kynurenine pathway in Xanthomonadales and Flavobacteriales Mol. Biol. Evol. 2009, 26 (2) 399-406
    • (2009) Mol. Biol. Evol. , vol.26 , Issue.2 , pp. 399-406
    • Lima, W.C.1    Varani, A.M.2    Menck, C.F.3
  • 72
  • 74
    • 0035854531 scopus 로고    scopus 로고
    • Genetic analysis of an archaeal Holliday junction resolvase in Escherichia coli
    • Bolt, E. L.; Lloyd, R. G.; Sharples, G. J. Genetic analysis of an archaeal Holliday junction resolvase in Escherichia coli J. Mol. Biol. 2001, 310 (3) 577-589
    • (2001) J. Mol. Biol. , vol.310 , Issue.3 , pp. 577-589
    • Bolt, E.L.1    Lloyd, R.G.2    Sharples, G.J.3


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