Genetic analysis of an archaeal Holliday junction resolvase in Escherichia coli

Journal of Molecular Biology

Volumn 310, Issue 3, 2001, Pages 577-589

  Bolt, Edward L ^a   Lloyd, Robert G ^a   Sharples, Gary J ^a  

^a UNIVERSITY OF NOTTINGHAM   (United Kingdom)

Author keywords

Archaea; DNA repair; Hjc; Recombination

Indexed keywords

DNA; RESOLVASE;

ARTICLE; DNA RECOMBINATION; DNA REPAIR; DNA REPLICATION; ENZYME STRUCTURE; ESCHERICHIA COLI; GENETIC ANALYSIS; HOLLIDAY JUNCTION; METHANOBACTERIUM THERMOAUTOTROPHICUM; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING;

ARCHAEA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; METHANOBACTERIUM; METHANOTHERMOBACTER THERMAUTOTROPHICUS;

EID: 0035854531     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.2001.4791     Document Type: Article

References (53)

1. Recognition and manipulation of branched DNA structure by junction-resolving enzymes
2. The X philes: Structure-specific endonucleases that resolve Holliday junctions
3. Bacterial-type DNA holliday junction resolvases in eukaryotic viruses
4. RuvAB acts at arrested replication forks
5. Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
6. Rescue of stalled replication forks by RecG: Simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation
7. Formation of Holliday junctions by regression of stalled replication forks: RecG stimulates fork regression even when the DNA is negatively supercoiled
8. The importance of repairing stalled replication forks
9. PriA-directed replication fork restart in Escherichia coli
10. Resolving the relationships of resolving enzymes
11. Processing of recombination intermediates by the RuvABC proteins
12. X-ray structure of T4 endonuclease VII: A DNA junction resolvase with a novel fold and unusual domain-swapped dimer architecture
13. Crystal structure of the Holliday junction resolving enzyme T7 endonuclease I
14. Sequence-specificity and biochemical characterization of the RusA Holliday junction resolvase of Escherichia coli
15. Analysis of conserved basic residues associated with DNA binding (Arg69) and catalysis (Lys76) by the RusA Holliday junction resolvase
16. Structural recognition and distortion by the DNA junction-resolving enzyme RusA
17. Genetic recombination in E. coli: RuvC protein cleaves Holliday junctions at resolution hotspots in vitro
18. Resolution of Holliday intermediates in recombination and DNA repair: Indirect suppression of ruvA, ruvB and ruvC mutations
19. Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82
20. Formation of RuvABC-Holliday junction complexes in vitro
21. Cleavage of Holliday junctions by the Escherichia coli RuvABC complex
22. Branch migration and Holliday junction resolution catalysed by activities from mammalian cells
23. The DNA replication protein PriA and the recombination protein RecG bind D-loops
24. A Holliday junction resolvase from Pyrococcus furiosus: Functional similarity to Escherichia coli RuvC provides evidence for conserved mechanism of homologous recombination in Bacteria, Eukarya, and Archaea
25. Biochemical characterisation of the Hjc Holliday junction resolvase of Pyrococcus furiosus
26. Two Holliday junction resolving enzymes in Sulfolobus solfataricus
27. Holliday junction resolvases and related nucleases: Identification of new families, phyletic distribution and evolutionary trajectories
28. Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus
29. Archaea and the origin(s) of DNA replication proteins
30. Archaeal DNA replication: Identifying the pieces to solve a puzzle
31. Insights into DNA replication from the third domain of life
32. An archaeal Holliday junction resolving enzyme from Sulfolobus solfataricus exhibits unique properties
33. Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: Functional analysis and comparative genomics
34. Mutational analysis of the Pyrococcus furiosus Holliday junction resolvase Hjc revealed functionally important residues for dimer formation, junction DNA binding and cleavage activities
35. A conserved nuclease domain in the archaeal Holliday junction resolving enzyme Hjc
36. A new Holliday junction resolving enzyme from Schzosaccharomyces pombe that is homologous to CCE1 from Saccharomyces cerevisieae
37. Substrate specificity of the SpCCE1 Holliday junction resolvase of Schizosaccharomyces pombe
38. λ Rap protein is a structure-specific endonuclease involved in phage recombination
39. DNA structure specificity of Rap endonuclease
40. Symmetric Holliday junction crossover isomers
41. The Holliday junction in an inverted repeat DNA sequence: Sequence effects on the structure of four-way junctions
42. Complementation used to clone a human homologue of the fission yeast cell cycle control gene cdc2
43. Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
44. A unique organization of the protein subunits of the DNA polymerase clamp loader in the archaeon Methanobacterium thermoautotrophicum ΔH
45. Functional interactions of a homolog of proliferating cell nuclear antigen with DNA polymerases in Archaea
46. Biochemical characterization of a clamp-loader complex homologous to eukaryotic replication factor C from the hyperthermophilic archaeon Sulfolobus solfataricus
47. Identification and characterization of a single-stranded DNA-binding protein from the archaeon Methanococcus jannaschii
48. recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae
49. RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange
50. Efficient strand transfer by the RadA recombinase from the hyperthermophilic archaeon Desulfurococcus amylolyticus
51. The RadA protein from a hyperthermophilic archaeon Pyrobaculum islandicum is a DNA-dependent ATPase that exhibits two disparate catalytic modes, with a transition temperature at 75°C
52. A bacteriophage T7-RNA polymerase promoter system for controlled exclusive expression of specific genes
53. A rapid and sensitive method for the quantitation of microgram quantites of protein utilizing the principle of protein-dye binding