-
1
-
-
0025099312
-
Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental-studies in microbiology
-
Amann R.I., et al. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental-studies in microbiology. J. Bacteriol. 1990, 172:762-770.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 762-770
-
-
Amann, R.I.1
-
2
-
-
33748317969
-
Molecular phylogenetic and chemical analyses of the microbial mats in deep-sea cold seep sediments at the northeastern Japan Sea
-
Arakawa S., et al. Molecular phylogenetic and chemical analyses of the microbial mats in deep-sea cold seep sediments at the northeastern Japan Sea. Extremophiles 2006, 10:311-319.
-
(2006)
Extremophiles
, vol.10
, pp. 311-319
-
-
Arakawa, S.1
-
3
-
-
0034754117
-
Temporal variability in phytodetritus and megabenthic activity at the seabed in the deep Northeast Atlantic
-
Bett B.J., et al. Temporal variability in phytodetritus and megabenthic activity at the seabed in the deep Northeast Atlantic. Prog. Oceanogr. 2001, 50:349-368.
-
(2001)
Prog. Oceanogr.
, vol.50
, pp. 349-368
-
-
Bett, B.J.1
-
4
-
-
84858862141
-
The energy-diversity relationship of complex bacterial communities in Arctic deep-sea sediments
-
Bienhold C., et al. The energy-diversity relationship of complex bacterial communities in Arctic deep-sea sediments. ISME J. 2012, 6:724-732.
-
(2012)
ISME J.
, vol.6
, pp. 724-732
-
-
Bienhold, C.1
-
5
-
-
33644951344
-
Bacterial diversity in organically-enriched fish farm sediments
-
Bissett A., et al. Bacterial diversity in organically-enriched fish farm sediments. FEMS Microbiol. Ecol. 2006, 55:48-56.
-
(2006)
FEMS Microbiol. Ecol.
, vol.55
, pp. 48-56
-
-
Bissett, A.1
-
6
-
-
44649186238
-
Flavobacterial response to organic pollution
-
Bissett A., et al. Flavobacterial response to organic pollution. Aquat. Microb. Ecol. 2008, 51:31-43.
-
(2008)
Aquat. Microb. Ecol.
, vol.51
, pp. 31-43
-
-
Bissett, A.1
-
7
-
-
0029663220
-
Effect of organic enrichments on hydrolytic potentials and growth of bacteria in deep-sea sediments
-
Boetius A., Lochte K. Effect of organic enrichments on hydrolytic potentials and growth of bacteria in deep-sea sediments. Mar. Ecol. Prog. Ser. 1996, 140:239-250.
-
(1996)
Mar. Ecol. Prog. Ser.
, vol.140
, pp. 239-250
-
-
Boetius, A.1
Lochte, K.2
-
8
-
-
0038369933
-
Biodiversity, community structural shifts, and biogeography of prokaryotes within Antarctic continental shelf sediment
-
Bowman J.P., McCuaig R.D. Biodiversity, community structural shifts, and biogeography of prokaryotes within Antarctic continental shelf sediment. Appl. Environ. Microbiol. 2003, 69:2463-2483.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2463-2483
-
-
Bowman, J.P.1
McCuaig, R.D.2
-
9
-
-
0037693813
-
Prokaryotic metabolic activity and community structure in Antarctic continental shelf sediments
-
Bowman J.P., et al. Prokaryotic metabolic activity and community structure in Antarctic continental shelf sediments. Appl. Environ. Microbiol. 2003, 69:2448-2462.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2448-2462
-
-
Bowman, J.P.1
-
10
-
-
0001463548
-
Non-parametric estimation of the number of classes in a population
-
Chao A. Non-parametric estimation of the number of classes in a population. Scan. J. Stat. 1984, 11:265-270.
-
(1984)
Scan. J. Stat.
, vol.11
, pp. 265-270
-
-
Chao, A.1
-
12
-
-
0034469143
-
Community composition of marine bacterioplankton determined by 16S rRNA gene clone libraries and fluorescence in situ hybridization
-
Cottrell M.,.T., Kirchman D.,.L. Community composition of marine bacterioplankton determined by 16S rRNA gene clone libraries and fluorescence in situ hybridization. Appl. Environ. Microbiol. 2000, 66:5116-5122.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 5116-5122
-
-
Cottrell, M.T.1
Kirchman, D.L.2
-
13
-
-
0033833853
-
Bacterial response to seasonal changes in labile organic matter composition on the continental shelf and bathyal sediments of the Cretan Sea
-
Danovaro R., et al. Bacterial response to seasonal changes in labile organic matter composition on the continental shelf and bathyal sediments of the Cretan Sea. Progr. Oceanogr. 2000, 46:345-366.
-
(2000)
Progr. Oceanogr.
, vol.46
, pp. 345-366
-
-
Danovaro, R.1
-
14
-
-
0027801562
-
Phylogenetic diversity of aggregate-attached vs free-living marine bacterial assemblages
-
Delong E.F., et al. Phylogenetic diversity of aggregate-attached vs free-living marine bacterial assemblages. Limnol. Oceanogr. 1993, 38:924-934.
-
(1993)
Limnol. Oceanogr.
, vol.38
, pp. 924-934
-
-
Delong, E.F.1
-
15
-
-
0030878975
-
Microbial respiration and diffusive oxygen uptake of deep-sea sediments in the Southern Ocean (ANTARES-I cruise)
-
De Wit R., et al. Microbial respiration and diffusive oxygen uptake of deep-sea sediments in the Southern Ocean (ANTARES-I cruise). Deep. Sea Res. 1997, 44:1053-1068. Part II.
-
(1997)
Deep. Sea Res.
, vol.44
, Issue.PART II
, pp. 1053-1068
-
-
De Wit, R.1
-
16
-
-
0034465723
-
The effect of water depth on bacterial numbers, thymidine incorporation rates and C:N ratios in northeast Atlantic surficial sediments
-
Dixon J.L., Turley C.M. The effect of water depth on bacterial numbers, thymidine incorporation rates and C:N ratios in northeast Atlantic surficial sediments. Hydrobiologia 2000, 440:217-225.
-
(2000)
Hydrobiologia
, vol.440
, pp. 217-225
-
-
Dixon, J.L.1
Turley, C.M.2
-
17
-
-
0035673431
-
The seasonal development of the bacterioplankton bloom in the Ross Sea, Antarctica 1994-1997
-
Ducklow H., et al. The seasonal development of the bacterioplankton bloom in the Ross Sea, Antarctica 1994-1997. Deep. Sea Res. 2001, 48:4199-4221. Part II.
-
(2001)
Deep. Sea Res.
, vol.48
, Issue.PART II
, pp. 4199-4221
-
-
Ducklow, H.1
-
18
-
-
0034758636
-
Bacterial abundance and activity in deep-sea sediments from the eastern North Atlantic
-
Eardly D.F., et al. Bacterial abundance and activity in deep-sea sediments from the eastern North Atlantic. Progr. Oceanogr. 2001, 50:245-259.
-
(2001)
Progr. Oceanogr.
, vol.50
, pp. 245-259
-
-
Eardly, D.F.1
-
19
-
-
49249138150
-
Active bacterial community structure along vertical redox gradients in Baltic Sea sediment
-
Edlund A., et al. Active bacterial community structure along vertical redox gradients in Baltic Sea sediment. Environ. Microbiol. 2008, 10:2051-2063.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 2051-2063
-
-
Edlund, A.1
-
20
-
-
27844507542
-
Population dynamics of Cytophaga-Flavobacteria during marine phytoplankton blooms analyzed by real-time quantitative PCR
-
Fandino L.B., et al. Population dynamics of Cytophaga-Flavobacteria during marine phytoplankton blooms analyzed by real-time quantitative PCR. Aquat. Microb. Ecol. 2005, 40:251-257.
-
(2005)
Aquat. Microb. Ecol.
, vol.40
, pp. 251-257
-
-
Fandino, L.B.1
-
21
-
-
42149132675
-
Effect of phytoplankton bloom deposition on benthic bacterial communities in two contrasting sediments in the southern North Sea
-
Franco M.A., et al. Effect of phytoplankton bloom deposition on benthic bacterial communities in two contrasting sediments in the southern North Sea. Aquat. Microb. Ecol. 2007, 48:241-254.
-
(2007)
Aquat. Microb. Ecol.
, vol.48
, pp. 241-254
-
-
Franco, M.A.1
-
22
-
-
84889461592
-
Deep-sea benthic sampling
-
Blackwell Scientific Publications, Oxford, N.A. Holmes, A.D. McIntyre (Eds.)
-
Gage J.D., Bett B.J. Deep-sea benthic sampling. Methods for the Study of the Marine Benthos 2005, 273-325. Blackwell Scientific Publications, Oxford. 3rd edition. N.A. Holmes, A.D. McIntyre (Eds.).
-
(2005)
Methods for the Study of the Marine Benthos
, pp. 273-325
-
-
Gage, J.D.1
Bett, B.J.2
-
23
-
-
34147144110
-
Adherent bacteria in heavy metal contaminated marine sediments
-
Gillan D.C., Pernet P. Adherent bacteria in heavy metal contaminated marine sediments. Biofouling 2007, 23:1-13.
-
(2007)
Biofouling
, vol.23
, pp. 1-13
-
-
Gillan, D.C.1
Pernet, P.2
-
24
-
-
17644439150
-
Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization
-
Glöckner F.O., et al. Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization. Appl. Environ. Microbiol. 1999, 65:3721-3726.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 3721-3726
-
-
Glöckner, F.O.1
-
25
-
-
0000803388
-
The population frequencies of species and the estimation of population parameters
-
Good I.L. The population frequencies of species and the estimation of population parameters. Biometrika 1953, 80:193-201.
-
(1953)
Biometrika
, vol.80
, pp. 193-201
-
-
Good, I.L.1
-
26
-
-
0036272385
-
Biological responses to seasonally varying fluxes of organic matter to the ocean floor: a review
-
Gooday A.J. Biological responses to seasonally varying fluxes of organic matter to the ocean floor: a review. J. Oceanogr. 2002, 58:305-332.
-
(2002)
J. Oceanogr.
, vol.58
, pp. 305-332
-
-
Gooday, A.J.1
-
27
-
-
0002051540
-
A user-friendly biological sequence alignment editor for Windows 95/98/NT
-
Hall T. A user-friendly biological sequence alignment editor for Windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41:95-98.
-
(1999)
Nucleic Acids Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.1
-
28
-
-
43149102303
-
Comparison of deep-sea sediment microbial communities in the Eastern Mediterranean
-
Heijs S.K., et al. Comparison of deep-sea sediment microbial communities in the Eastern Mediterranean. FEMS Microbiol. Ecol. 2008, 64:362-377.
-
(2008)
FEMS Microbiol. Ecol.
, vol.64
, pp. 362-377
-
-
Heijs, S.K.1
-
29
-
-
84875615765
-
-
DGGE from
-
Helms, C. 1990. DGGE from http://www.hg.wustl.edu/hdk_lab_manual/dgge/dgge1.html.
-
(1990)
-
-
Helms, C.1
-
30
-
-
69649084742
-
Pore-fluid Fe isotopes reflect the extent of benthic Fe redox recycling: evidence from continental shelf and deep-sea sediments
-
Homoky W.B., et al. Pore-fluid Fe isotopes reflect the extent of benthic Fe redox recycling: evidence from continental shelf and deep-sea sediments. Geology 2009, 37:751-754.
-
(2009)
Geology
, vol.37
, pp. 751-754
-
-
Homoky, W.B.1
-
31
-
-
0037742699
-
Bacterial diversity patterns along a gradient of primary productivity
-
Horner-Devine M.C., et al. Bacterial diversity patterns along a gradient of primary productivity. Ecol. Lett. 2003, 6:613-622.
-
(2003)
Ecol. Lett.
, vol.6
, pp. 613-622
-
-
Horner-Devine, M.C.1
-
32
-
-
34250642672
-
Balancing the global carbon budget
-
Houghton R.A. Balancing the global carbon budget. Ann. Rev. Earth Plan. Sci. 2007, 35:313-347.
-
(2007)
Ann. Rev. Earth Plan. Sci.
, vol.35
, pp. 313-347
-
-
Houghton, R.A.1
-
33
-
-
33748769754
-
Microbial community diversity associated with carbon and nitrogen cycling in permeable shelf sediments
-
Hunter E.M., et al. Microbial community diversity associated with carbon and nitrogen cycling in permeable shelf sediments. Appl. Environ. Microbiol. 2006, 72:5689-5701.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5689-5701
-
-
Hunter, E.M.1
-
34
-
-
35348838894
-
Two abyssal sites in the Southern Ocean influenced by different organic matter inputs: Environmental characterization and preliminary observations on the benthic foraminifera
-
Hughes J.A., et al. Two abyssal sites in the Southern Ocean influenced by different organic matter inputs: Environmental characterization and preliminary observations on the benthic foraminifera. Deep Sea Res. II 2007, 54:2275-2290.
-
(2007)
Deep Sea Res. II
, vol.54
, pp. 2275-2290
-
-
Hughes, J.A.1
-
35
-
-
33644505436
-
Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin
-
Inagaki F., et al. Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin. Proc. Natl. Acad. Sci. USA 2006, 103:2815-2820.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 2815-2820
-
-
Inagaki, F.1
-
36
-
-
34548737680
-
Feast and famine - microbial life in the deep-sea bed
-
Jørgensen B.B., Boetius A. Feast and famine - microbial life in the deep-sea bed. Nat. Rev. Microbiol. 2007, 5:770-781.
-
(2007)
Nat. Rev. Microbiol.
, vol.5
, pp. 770-781
-
-
Jørgensen, B.B.1
Boetius, A.2
-
37
-
-
0242380174
-
Characterization of depth-related microbial community structure in lake sediment by denaturing gradient gel electrophoresis of amplified 16S rDNA and reversely transcribed 16S rRNA fragments
-
Koizumi Y., et al. Characterization of depth-related microbial community structure in lake sediment by denaturing gradient gel electrophoresis of amplified 16S rDNA and reversely transcribed 16S rRNA fragments. FEMS Microbiol. Ecol. 2003, 46:147-157.
-
(2003)
FEMS Microbiol. Ecol.
, vol.46
, pp. 147-157
-
-
Koizumi, Y.1
-
38
-
-
0035670024
-
Environmental influences on regional deep-sea species diversity
-
Levin L.A., et al. Environmental influences on regional deep-sea species diversity. Ann. Rev. Ecol. Syst. 2001, 32:51-93.
-
(2001)
Ann. Rev. Ecol. Syst.
, vol.32
, pp. 51-93
-
-
Levin, L.A.1
-
39
-
-
0032882298
-
Microbial diversity in sediments collected from the deepest cold-seep area, the Japan Trench
-
Li L.N., et al. Microbial diversity in sediments collected from the deepest cold-seep area, the Japan Trench. Mar. Biotech. 1999, 1:391-400.
-
(1999)
Mar. Biotech.
, vol.1
, pp. 391-400
-
-
Li, L.N.1
-
40
-
-
0032990367
-
Bacterial diversity in deep-sea sediments from different depths
-
Li L.N., et al. Bacterial diversity in deep-sea sediments from different depths. Biodiv. Conserv. 1999, 8:659-677.
-
(1999)
Biodiv. Conserv.
, vol.8
, pp. 659-677
-
-
Li, L.N.1
-
41
-
-
0037164216
-
Community structure and activity of sulfate-reducing bacteria in an intertidal surface sediment: a multi-method approach
-
Llobet-Brossa E., et al. Community structure and activity of sulfate-reducing bacteria in an intertidal surface sediment: a multi-method approach. Aquat. Microb. Ecol. 2002, 29:211-226.
-
(2002)
Aquat. Microb. Ecol.
, vol.29
, pp. 211-226
-
-
Llobet-Brossa, E.1
-
42
-
-
0027085487
-
Bacterial standing stock and consumption of organic-carbon in the benthic boundary-layer of the abyssal North-Atlantic
-
Kluwer, Dordrecht, NATO ASI Series C
-
Lochte K. Bacterial standing stock and consumption of organic-carbon in the benthic boundary-layer of the abyssal North-Atlantic. Deep-Sea Food Chains and the Global Carbon Cycle 1992, vol. 360:1-10. Kluwer, Dordrecht, NATO ASI Series C.
-
(1992)
Deep-Sea Food Chains and the Global Carbon Cycle
, vol.360
, pp. 1-10
-
-
Lochte, K.1
-
43
-
-
0141788252
-
Bacterial diversity in hydrothermal sediment and epsilon proteobacterial dominance in experimental microcolonizers at the Mid-Atlantic Ridge
-
Lopez-Garcia P., et al. Bacterial diversity in hydrothermal sediment and epsilon proteobacterial dominance in experimental microcolonizers at the Mid-Atlantic Ridge. Environ. Microbiol. 2003, 5:961-976.
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 961-976
-
-
Lopez-Garcia, P.1
-
44
-
-
2542523843
-
ARB: a software environment for sequence data
-
Ludwig W., et al. ARB: a software environment for sequence data. Nucleic Acids Res. 2004, 32:1363-1371.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
-
45
-
-
9344247522
-
Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum Cytophaga-Flavobacter-Bacteroides in the natural environment
-
Manz W., et al. Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum Cytophaga-Flavobacter-Bacteroides in the natural environment. Microbiology UK 1996, 142:1097-1106.
-
(1996)
Microbiology UK
, vol.142
, pp. 1097-1106
-
-
Manz, W.1
-
46
-
-
35348897125
-
Controls on the sediment geochemistry in the Crozet region
-
Marsh R., et al. Controls on the sediment geochemistry in the Crozet region. Deep. Sea Res. II 2007, 54:2260-2274.
-
(2007)
Deep. Sea Res. II
, vol.54
, pp. 2260-2274
-
-
Marsh, R.1
-
47
-
-
0036324293
-
Phylogenetic approaches for describing and comparing the diversity of microbial communities
-
Martin A.P. Phylogenetic approaches for describing and comparing the diversity of microbial communities. Appl. Environ. Microbiol. 2002, 68:3673-3682.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 3673-3682
-
-
Martin, A.P.1
-
48
-
-
0032916067
-
Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures
-
McCaig A.E., et al. Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures. Appl. Environ. Microbiol. 1999, 65:1721-1730.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 1721-1730
-
-
McCaig, A.E.1
-
49
-
-
21244480848
-
Similar rapid response to phytodetritus deposition in shallow and deep-sea sediments
-
Moodley L., et al. Similar rapid response to phytodetritus deposition in shallow and deep-sea sediments. J. Mar. Res. 2005, 63:457-469.
-
(2005)
J. Mar. Res.
, vol.63
, pp. 457-469
-
-
Moodley, L.1
-
50
-
-
33646181371
-
Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin
-
Musat N., et al. Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin. Wadden Sea. Syst. Appl. Microbiol. 2006, 29:333-348.
-
(2006)
Wadden Sea. Syst. Appl. Microbiol.
, vol.29
, pp. 333-348
-
-
Musat, N.1
-
51
-
-
14344250484
-
Diversity and vertical distribution of cultured and uncultured delta-Proteobacteria in an intertidal mud flat of the Wadden Sea
-
Mussmann M., et al. Diversity and vertical distribution of cultured and uncultured delta-Proteobacteria in an intertidal mud flat of the Wadden Sea. Environ. Microbiol. 2005, 7:405-418.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 405-418
-
-
Mussmann, M.1
-
52
-
-
0027460328
-
Profiling of complex microbial-populations by denaturing gradient gel-electrophoresis analysis of polymerase chain reaction-amplified genes-coding for 16s ribosomal-RNA
-
Muyzer G., et al. Profiling of complex microbial-populations by denaturing gradient gel-electrophoresis analysis of polymerase chain reaction-amplified genes-coding for 16s ribosomal-RNA. Appl. Environ. Microbiol. 1993, 59:695-700.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
-
53
-
-
0031959006
-
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
-
Muyzer G., Smalla K. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie Van Leeuwenhoek (Int. J. Gen. Mol. Microbiol.) 1998, 73:127-141.
-
(1998)
Antonie Van Leeuwenhoek (Int. J. Gen. Mol. Microbiol.)
, vol.73
, pp. 127-141
-
-
Muyzer, G.1
Smalla, K.2
-
54
-
-
12544256650
-
Diversity of functional genes of methanogens, methanotrophs and sulfate reducers in deep-sea hydrothermal environments
-
Nercessian O., et al. Diversity of functional genes of methanogens, methanotrophs and sulfate reducers in deep-sea hydrothermal environments. Environ. Microbiol. 2005, 7:118-132.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 118-132
-
-
Nercessian, O.1
-
55
-
-
0032424081
-
Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes
-
Neef A., et al. Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes. Microbiology-UK 1998, 144:3257-3266.
-
(1998)
Microbiology-UK
, vol.144
, pp. 3257-3266
-
-
Neef, A.1
-
56
-
-
43049156436
-
Rapid bacterial mineralization of organic carbon produced during a phytoplankton bloom induced by natural iron fertilization in the Southern Ocean
-
Obernosterer I., et al. Rapid bacterial mineralization of organic carbon produced during a phytoplankton bloom induced by natural iron fertilization in the Southern Ocean. Deep. Sea Res. II 2008, 55:777-789.
-
(2008)
Deep. Sea Res. II
, vol.55
, pp. 777-789
-
-
Obernosterer, I.1
-
57
-
-
0347794946
-
Recent studies on bacterial populations and processes in subseafloor sediments: a review
-
Parkes R.J., et al. Recent studies on bacterial populations and processes in subseafloor sediments: a review. Hydrogeol. J. 2000, 8:11-28.
-
(2000)
Hydrogeol. J.
, vol.8
, pp. 11-28
-
-
Parkes, R.J.1
-
58
-
-
35348893686
-
Dissolved iron in the vicinity of the Crozet Islands, Southern Ocean
-
Planquette H., et al. Dissolved iron in the vicinity of the Crozet Islands, Southern Ocean. Deep. Sea Res. II 2007, 54:1999-2019.
-
(2007)
Deep. Sea Res. II
, vol.54
, pp. 1999-2019
-
-
Planquette, H.1
-
59
-
-
23744440986
-
Links between geographic location, environmental factors, and microbial community composition in sediments of the Eastern Mediterranean Sea
-
Polymenakou P.N., et al. Links between geographic location, environmental factors, and microbial community composition in sediments of the Eastern Mediterranean Sea. Microb. Ecol. 2005, 49:367-378.
-
(2005)
Microb. Ecol.
, vol.49
, pp. 367-378
-
-
Polymenakou, P.N.1
-
60
-
-
27744530866
-
Bacterial community composition in different sediments from the Eastern Mediterranean Sea: a comparison of four 16S ribosomal DNA clone libraries
-
Polymenakou P.N., et al. Bacterial community composition in different sediments from the Eastern Mediterranean Sea: a comparison of four 16S ribosomal DNA clone libraries. Microb. Ecol. 2005, 50:447-462.
-
(2005)
Microb. Ecol.
, vol.50
, pp. 447-462
-
-
Polymenakou, P.N.1
-
61
-
-
59049089418
-
Southern Ocean deep-water carbon export enhanced by natural iron fertilization
-
577-U81
-
Pollard R.T., et al. Southern Ocean deep-water carbon export enhanced by natural iron fertilization. Nature 2009, 457. 577-U81.
-
(2009)
Nature
, vol.457
-
-
Pollard, R.T.1
-
62
-
-
84864134721
-
SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes
-
Pruesse E., et al. SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes. Bioinformatics 2012, 28:1823-1829.
-
(2012)
Bioinformatics
, vol.28
, pp. 1823-1829
-
-
Pruesse, E.1
-
63
-
-
34548709102
-
Impact of small-scale biogenic sediment structures on bacterial distribution and activity in Arctic deep-sea sediments
-
Quéric N.V., Soltwedel T. Impact of small-scale biogenic sediment structures on bacterial distribution and activity in Arctic deep-sea sediments. Mar. Ecol. 2007, 28:66-74.
-
(2007)
Mar. Ecol.
, vol.28
, pp. 66-74
-
-
Quéric, N.V.1
Soltwedel, T.2
-
64
-
-
0035158607
-
Quantitative molecular analysis of the microbial community in marine Arctic sediments (Svalbard)
-
Ravenschlag K., et al. Quantitative molecular analysis of the microbial community in marine Arctic sediments (Svalbard). Appl. Environ. Microbiol. 2001, 67:387-395.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 387-395
-
-
Ravenschlag, K.1
-
65
-
-
0036330519
-
Microbial communities from methane hydrate-bearing deep marine sediments in a forearc basin
-
Reed D.W., et al. Microbial communities from methane hydrate-bearing deep marine sediments in a forearc basin. Appl. Environ. Microbiol. 2002, 68:3759-3770.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 3759-3770
-
-
Reed, D.W.1
-
66
-
-
33747624731
-
Global bathymetric patterns of standing stock and body size in the deep-sea benthos
-
Rex M.A., et al. Global bathymetric patterns of standing stock and body size in the deep-sea benthos. Mar. Ecol. Progr. Ser. 2006, 317:1-8.
-
(2006)
Mar. Ecol. Progr. Ser.
, vol.317
, pp. 1-8
-
-
Rex, M.A.1
-
67
-
-
38849145997
-
Effects of phytoplankton bloom in a coastal ecosystem on the composition of bacterial communities
-
Rink B., et al. Effects of phytoplankton bloom in a coastal ecosystem on the composition of bacterial communities. Aquat. Microb. Ecol. 2007, 48:47-60.
-
(2007)
Aquat. Microb. Ecol.
, vol.48
, pp. 47-60
-
-
Rink, B.1
-
68
-
-
0344483898
-
The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions
-
Rosselló-Mora R., et al. The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions. Syst. Appl. Microbiol. 1999, 22:237-248.
-
(1999)
Syst. Appl. Microbiol.
, vol.22
, pp. 237-248
-
-
Rosselló-Mora, R.1
-
69
-
-
55949085256
-
Connections between climate, food limitation, and carbon cycling in abyssal sediment communities
-
Ruhl R.A., et al. Connections between climate, food limitation, and carbon cycling in abyssal sediment communities. Proc. Natl. Acad. Sci. USA 2008, 105:17006-17011.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 17006-17011
-
-
Ruhl, R.A.1
-
70
-
-
77958034968
-
Particle fluxes in the North-East Atlantic and the Southern Ocean
-
Ph.D. Thesis. School of Ocean and Earth Science, University of Southampton.
-
Salter, I., 2007. Particle fluxes in the North-East Atlantic and the Southern Ocean. Ph.D. Thesis. School of Ocean and Earth Science, University of Southampton.
-
(2007)
-
-
Salter, I.1
-
71
-
-
35348888270
-
Estimating carbon, silica and diatom export from a naturally fertilised phytoplankton bloom in the Southern Ocean using PELAGRA: A novel drifting sediment trap
-
Salter I., et al. Estimating carbon, silica and diatom export from a naturally fertilised phytoplankton bloom in the Southern Ocean using PELAGRA: A novel drifting sediment trap. Deep. Sea Res. II 2007, 54:2233-2259.
-
(2007)
Deep. Sea Res. II
, vol.54
, pp. 2233-2259
-
-
Salter, I.1
-
72
-
-
0032493132
-
Abundance, vertical distribution, and community structure of benthic prokaryotes from permanently cold marine sediments (Svalbard, Arctic Ocean)
-
Sahm K., Berninger U.G. Abundance, vertical distribution, and community structure of benthic prokaryotes from permanently cold marine sediments (Svalbard, Arctic Ocean). Mar. Ecol. Progr. Ser. 1998, 165:71-80.
-
(1998)
Mar. Ecol. Progr. Ser.
, vol.165
, pp. 71-80
-
-
Sahm, K.1
Berninger, U.G.2
-
73
-
-
0024506815
-
Solutions to problems in enumerating sediment bacteria by direct counts
-
Schallenberg M., et al. Solutions to problems in enumerating sediment bacteria by direct counts. Appl. Environ. Microbiol. 1989, 55:1214-1219.
-
(1989)
Appl. Environ. Microbiol.
, vol.55
, pp. 1214-1219
-
-
Schallenberg, M.1
-
74
-
-
0034530892
-
Microbial community dynamics in Mediterranean nutrient-enriched seawater mesocosms: changes in the genetic diversity of bacterial populations
-
Schäfer H., et al. Microbial community dynamics in Mediterranean nutrient-enriched seawater mesocosms: changes in the genetic diversity of bacterial populations. FEMS Microbiol. Ecol. 2001, 34:243-253.
-
(2001)
FEMS Microbiol. Ecol.
, vol.34
, pp. 243-253
-
-
Schäfer, H.1
-
75
-
-
0003341851
-
Development and application of nucleic acid probes
-
John Wiley & Sons Ltd., Chichester, E. Stackebrandt, M. Goodfellow (Eds.)
-
Stahl D.A., Amann R. Development and application of nucleic acid probes. Nucleic Acid Techniques in Bacterial Systematics 1991, 205-248. John Wiley & Sons Ltd., Chichester. E. Stackebrandt, M. Goodfellow (Eds.).
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 205-248
-
-
Stahl, D.A.1
Amann, R.2
-
76
-
-
48949094462
-
A comparison of mesopelagic mesozooplankton community structure in the subtropical and subarctic North Pacific Ocean
-
Steinberg D.K., et al. A comparison of mesopelagic mesozooplankton community structure in the subtropical and subarctic North Pacific Ocean. Deep. Sea Res. II 2008, 55:1615-1635.
-
(2008)
Deep. Sea Res. II
, vol.55
, pp. 1615-1635
-
-
Steinberg, D.K.1
-
77
-
-
0033848286
-
Bacteria in the cold deep-sea benthic boundary layer and sediment-water interface of the NE Atlantic
-
Turley C.M. Bacteria in the cold deep-sea benthic boundary layer and sediment-water interface of the NE Atlantic. FEMS Microbiol. Ecol. 2000, 33:89-99.
-
(2000)
FEMS Microbiol. Ecol.
, vol.33
, pp. 89-99
-
-
Turley, C.M.1
-
78
-
-
0034554798
-
Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling
-
Urakawa H., et al. Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling. Environ. Microbiol. 2008, 5:542-554.
-
(2008)
Environ. Microbiol.
, vol.5
, pp. 542-554
-
-
Urakawa, H.1
-
79
-
-
0032975678
-
Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses
-
Van Hannen E.J., et al. Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses. Appl. Environ. Microbiol. 1999, 65:795-801.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 795-801
-
-
Van Hannen, E.J.1
-
80
-
-
35348823565
-
Physical conditions controlling the development of a regular phytoplankton bloom north of the Crozet Plateau, Southern Ocean
-
Venables H.J., et al. Physical conditions controlling the development of a regular phytoplankton bloom north of the Crozet Plateau, Southern Ocean. Deep. Sea Res. II 2007, 54:1949-1965.
-
(2007)
Deep. Sea Res. II
, vol.54
, pp. 1949-1965
-
-
Venables, H.J.1
-
81
-
-
34548293679
-
Naïve bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang Q.,.G.M., et al. Naïve bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 2007, 73:5261-5267.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 5261-5267
-
-
Wang, Q.G.M.1
-
82
-
-
33746716094
-
Prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin
-
Webster G., et al. Prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin. FEMS Microbiol. Ecol. 2006, 58:65-85.
-
(2006)
FEMS Microbiol. Ecol.
, vol.58
, pp. 65-85
-
-
Webster, G.1
-
83
-
-
38549100034
-
Major differences of bacterial diversity and activity inside and outside of a natural iron-fertilized phytoplankton bloom in the Southern Ocean
-
West N.J., et al. Major differences of bacterial diversity and activity inside and outside of a natural iron-fertilized phytoplankton bloom in the Southern Ocean. Environ. Microbiol. 2008, 10:738-756.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 738-756
-
-
West, N.J.1
-
84
-
-
0042467653
-
In situ experimental evidence of the fate of a phytodetritus pulse at the abyssal sea floor
-
Witte U., et al. In situ experimental evidence of the fate of a phytodetritus pulse at the abyssal sea floor. Nature 2003, 424:763-766.
-
(2003)
Nature
, vol.424
, pp. 763-766
-
-
Witte, U.1
-
85
-
-
34547201959
-
Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system
-
Woebken D., et al. Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system. Appl. Environ. Microbiol. 2007, 73:4648-4657.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 4648-4657
-
-
Woebken, D.1
-
86
-
-
52149085893
-
The all-species living tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains
-
Yarza P., et al. The all-species living tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains. Syst. Appl. Microbiol. 2008, 31:241-250.
-
(2008)
Syst. Appl. Microbiol.
, vol.31
, pp. 241-250
-
-
Yarza, P.1
-
87
-
-
35348921628
-
Microbial abundance, activity and iron uptake in vicinity of the Crozet Isles in November 2004-January 2005
-
Zubkov M.V., et al. Microbial abundance, activity and iron uptake in vicinity of the Crozet Isles in November 2004-January 2005. Deep. Sea Res. II 2007, 54:2126-2137.
-
(2007)
Deep. Sea Res. II
, vol.54
, pp. 2126-2137
-
-
Zubkov, M.V.1
|