메뉴 건너뛰기




Volumn 10, Issue 4, 2006, Pages 311-319

Molecular phylogenetic and chemical analyses of the microbial mats in deep-sea cold seep sediments at the northeastern Japan Sea

Author keywords

ANME; AOM; Cold seep; Deep sea; Deltaproteobacteria; Japan Sea; Microbial diversity; Microbial mat

Indexed keywords

METHANE; RNA 16S; SULFATE; WATER;

EID: 33748317969     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-005-0501-0     Document Type: Article
Times cited : (28)

References (31)
  • 4
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong EF (1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89:5685-5689
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 5685-5689
    • DeLong, E.F.1
  • 5
    • 0028279051 scopus 로고
    • Evidence for phylogenetic congruence among sulfur-oxidizing chemoautotrophic bacterial endosymbionts and their bivalve hosts
    • Distel DL, Felbeck H, Cavanaugh CM (1994) Evidence for phylogenetic congruence among sulfur-oxidizing chemoautotrophic bacterial endosymbionts and their bivalve hosts. J Mol Evol 38:533-542
    • (1994) J Mol Evol , vol.38 , pp. 533-542
    • Distel, D.L.1    Felbeck, H.2    Cavanaugh, C.M.3
  • 6
    • 33645684028 scopus 로고    scopus 로고
    • Microbial diversity of cold-seep sediments in Sagami Bay, Japan as determined by 16S rDNA and lipid analyses
    • in press
    • Fang J, Arakawa S, Kato C, Schouten S (2006) Microbial diversity of cold-seep sediments in Sagami Bay, Japan as determined by 16S rDNA and lipid analyses. FEMS Microbiol Ecol (in press)
    • (2006) FEMS Microbiol Ecol
    • Fang, J.1    Arakawa, S.2    Kato, C.3    Schouten, S.4
  • 7
    • 0035953449 scopus 로고    scopus 로고
    • Dual symbiosis in the cold-seep thyasirid clam Maorithyas hadalis from the hadal zone in the Japan Trench, western Pacific
    • Fujiwara Y, Kato C, Masui N, Fujikura K, Kojima S (2001) Dual symbiosis in the cold-seep thyasirid clam Maorithyas hadalis from the hadal zone in the Japan Trench, western Pacific. Mar Ecol Prog Ser 214:151-159
    • (2001) Mar Ecol Prog Ser , vol.214 , pp. 151-159
    • Fujiwara, Y.1    Kato, C.2    Masui, N.3    Fujikura, K.4    Kojima, S.5
  • 8
    • 0035748326 scopus 로고    scopus 로고
    • Archaeology of archaea: Geomicrobiological record of Pleistocene thermal events concealed in the deep-sea subseafloor environment
    • Inagaki F, Takai K, Komatsu T, Kanematsu T, Fujioka K, Horikoshi K (2001) Archaeology of archaea: geomicrobiological record of Pleistocene thermal events concealed in the deep-sea subseafloor environment. Extremophiles 5:385-392
    • (2001) Extremophiles , vol.5 , pp. 385-392
    • Inagaki, F.1    Takai, K.2    Komatsu, T.3    Kanematsu, T.4    Fujioka, K.5    Horikoshi, K.6
  • 9
    • 0036045734 scopus 로고    scopus 로고
    • Molecular phylogenetic analyses of reverse-transcribed bacterial rRNA obtained from deep-sea cold seep sediments
    • Inagaki F, Sakihama Y, Inoue A, Kato C, Horikoshi K (2002) Molecular phylogenetic analyses of reverse-transcribed bacterial rRNA obtained from deep-sea cold seep sediments. Environ Microbiol 4:277-294
    • (2002) Environ Microbiol , vol.4 , pp. 277-294
    • Inagaki, F.1    Sakihama, Y.2    Inoue, A.3    Kato, C.4    Horikoshi, K.5
  • 10
    • 0345328152 scopus 로고    scopus 로고
    • Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing ε-proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa Trough
    • Inagaki F, Takai K, Kobayashi H, Nealson KH, Horikoshi K (2003) Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing ε-proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa Trough. Int J Syst Evol Microbiol 53:1801-1805
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1801-1805
    • Inagaki, F.1    Takai, K.2    Kobayashi, H.3    Nealson, K.H.4    Horikoshi, K.5
  • 11
    • 5444247841 scopus 로고    scopus 로고
    • Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing epsilon-proteobacterium isolated from hydrothermal sediments from the mid-Okinawa Trough
    • Inagaki F, Takai K, Nealson KH, Horikoshi K (2004a) Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing epsilon-proteobacterium isolated from hydrothermal sediments from the mid-Okinawa Trough. Int J Syst Evol Microbiol 54:1477-1457
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 1477-1457
    • Inagaki, F.1    Takai, K.2    Nealson, K.H.3    Horikoshi, K.4
  • 12
    • 10444248885 scopus 로고    scopus 로고
    • Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at the Kuroshima Knoll, the Southern Ryukyu arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes
    • Inagaki F, Tsunogai U, Suzuki M, Kosaka A, Machiyama H, Takai K, Nunoura T, Nealson KH, Horikoshi K (2004b) Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at the Kuroshima Knoll, the Southern Ryukyu arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes. Appl Environ Microbiol 70:7445-7455
    • (2004) Appl Environ Microbiol , vol.70 , pp. 7445-7455
    • Inagaki, F.1    Tsunogai, U.2    Suzuki, M.3    Kosaka, A.4    Machiyama, H.5    Takai, K.6    Nunoura, T.7    Nealson, K.H.8    Horikoshi, K.9
  • 13
    • 0031196307 scopus 로고    scopus 로고
    • Molecular analyses of the sediment of the 11,000-m deep Mariana Trench
    • Kato C, Li L, Tamaoka J, Horikoshi K (1997) Molecular analyses of the sediment of the 11,000-m deep Mariana Trench. Extremophiles 1:117-123
    • (1997) Extremophiles , vol.1 , pp. 117-123
    • Kato, C.1    Li, L.2    Tamaoka, J.3    Horikoshi, K.4
  • 14
    • 33645691348 scopus 로고    scopus 로고
    • Microbial diversity in the cold seep sediments and sulfur circulation
    • Kato C, Arakawa S, Usami R, Sato T (2005) Microbial diversity in the cold seep sediments and sulfur circulation (in Japanese). Gekkan Chikyu 27:939-948
    • (2005) Gekkan Chikyu , vol.27 , pp. 939-948
    • Kato, C.1    Arakawa, S.2    Usami, R.3    Sato, T.4
  • 17
    • 0029415407 scopus 로고
    • A review of the geochemistry of methane in natural gas hydrate
    • Kvenvolden KA (1995) A review of the geochemistry of methane in natural gas hydrate. Org Chem 23:997-1008
    • (1995) Org Chem , vol.23 , pp. 997-1008
    • Kvenvolden, K.A.1
  • 18
    • 21144451290 scopus 로고    scopus 로고
    • Microbial diversity in the sediment collected from cold-seep areas and from different depth of the deep-sea
    • Horikoshi K, Tujii K (eds) Springer, Tokyo
    • Li L, Kato C (1999) Microbial diversity in the sediment collected from cold-seep areas and from different depth of the deep-sea. In: Horikoshi K, Tujii K (eds) Extremophiles in deep-sea environments. Springer, Tokyo, pp 55-88
    • (1999) Extremophiles in Deep-sea Environments , pp. 55-88
    • Li, L.1    Kato, C.2
  • 20
    • 0032882298 scopus 로고    scopus 로고
    • Microbial diversity in sediments collected from the deepest cold-seep area, the Japan Trench at a depth of 6,400 m
    • Li L, Kato C, Horikioshi K (1999b) Microbial diversity in sediments collected from the deepest cold-seep area, the Japan Trench at a depth of 6,400 m. Mar Biotechnol 1:391-400
    • (1999) Mar Biotechnol , vol.1 , pp. 391-400
    • Li, L.1    Kato, C.2    Horikioshi, K.3
  • 21
    • 38249033960 scopus 로고
    • Deep biological communities in the subduction zone of Japan from bottom photographs taken during "Nautile" dives in the Kaiko project
    • Ohta S, Laubier L (1987) Deep biological communities in the subduction zone of Japan from bottom photographs taken during "Nautile" dives in the Kaiko project. Earth Planet Sci Lett 83:329-342
    • (1987) Earth Planet Sci Lett , vol.83 , pp. 329-342
    • Ohta, S.1    Laubier, L.2
  • 22
    • 0029541078 scopus 로고
    • A seismic gap in the eastern margin of the Sea of Japan as inferred from the time-space distribution of past seismicity
    • Ohtake M (1995) A seismic gap in the eastern margin of the Sea of Japan as inferred from the time-space distribution of past seismicity. Island Arc 4:156-165
    • (1995) Island Arc , vol.4 , pp. 156-165
    • Ohtake, M.1
  • 23
    • 27744443926 scopus 로고    scopus 로고
    • Tectonic, geochemical and biological studies in the eastern margin of the Japan Sea - Preliminary results of Yokosuka/Shinkai 6500 YK01-06 Cruise
    • Okamura Y, Satake K, Takeuchi A, Gamo T, Kato C, Sasayama Y, Nakayama F, Ikehara K, Kodera T (2002) Tectonic, geochemical and biological studies in the eastern margin of the Japan Sea - preliminary results of Yokosuka/Shinkai 6500 YK01-06 Cruise. JAMSTEC J Deep Sea Res 20:77-114
    • (2002) JAMSTEC J Deep Sea Res , vol.20 , pp. 77-114
    • Okamura, Y.1    Satake, K.2    Takeuchi, A.3    Gamo, T.4    Kato, C.5    Sasayama, Y.6    Nakayama, F.7    Ikehara, K.8    Kodera, T.9
  • 25
    • 0035919654 scopus 로고    scopus 로고
    • Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis
    • Orphan VJ, House CH, Hinrichs KU, McKeegan KD, DeLong EF (2001b) Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis. Science 293:484-487
    • (2001) Science , vol.293 , pp. 484-487
    • Orphan, V.J.1    House, C.H.2    Hinrichs, K.U.3    McKeegan, K.D.4    DeLong, E.F.5
  • 26
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetics trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetics trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 27
    • 0024265906 scopus 로고
    • Cold-seep benthic communities in the Japan subduction zones: Geological control of community development
    • Sibuet M, Juniper SK, Pautot G (1988) Cold-seep benthic communities in the Japan subduction zones: geological control of community development. J Mar Res 46:333-348
    • (1988) J Mar Res , vol.46 , pp. 333-348
    • Sibuet, M.1    Juniper, S.K.2    Pautot, G.3
  • 29
    • 13244253577 scopus 로고    scopus 로고
    • Development of multi-bottle gas-tight water sampler WHATS for sampling sea-floor venting fluids
    • Tsunogai U, Kouzuma F, Nakagawa N, Gamo T, Kaneko T (2002a) Development of multi-bottle gas-tight water sampler WHATS for sampling sea-floor venting fluids. JAMSTEC J Deep Sea Res 21:91-95
    • (2002) JAMSTEC J Deep Sea Res , vol.21 , pp. 91-95
    • Tsunogai, U.1    Kouzuma, F.2    Nakagawa, N.3    Gamo, T.4    Kaneko, T.5
  • 30
    • 0037110501 scopus 로고    scopus 로고
    • Stable carbon and oxygen isotopic analysis of atmospheric carbon monoxide using CF-IRMS by isotope-ratio monitoring of CO
    • Tsunogai U, Nakagawa F, Komatsu D, Gamo T (2002b) Stable carbon and oxygen isotopic analysis of atmospheric carbon monoxide using CF-IRMS by isotope-ratio monitoring of CO. Anal Chem 74:5695-5700
    • (2002) Anal Chem , vol.74 , pp. 5695-5700
    • Tsunogai, U.1    Nakagawa, F.2    Komatsu, D.3    Gamo, T.4
  • 31
    • 0001618842 scopus 로고    scopus 로고
    • Determination of the Amurian plate motion, mantle dynamics and plate interactions in East Asia
    • American Geophysical Union, Washington
    • Wei D, Seno T (1998) Determination of the Amurian plate motion, mantle dynamics and plate interactions in East Asia. In: Geodynamics Series, American Geophysical Union, Washington, 27:337-346
    • (1998) Geodynamics Series , vol.27 , pp. 337-346
    • Wei, D.1    Seno, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.