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Volumn 1, Issue 4, 1999, Pages 391-400

Microbial diversity in sediments collected from the deepest cold-seep area, the Japan trench

Author keywords

Calyptogena; Cold seep environment; Japan Trench; Microbial diversity; Sediment; Sulfur reducing bacteria

Indexed keywords

COMMUNITY STRUCTURE; GENETIC DIVERSITY; METHANOCOCCOIDES BURTONII; POLYMERASE CHAIN REACTION; POPULATION GENETICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RIBOSOMAL DNA;

EID: 0032882298     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/PL00011793     Document Type: Article
Times cited : (164)

References (28)
  • 1
    • 0029832927 scopus 로고    scopus 로고
    • Perspective on archaeal diversity, thermophily and monophyly from environmental rDNA sequences
    • Barns, S.M., Delwiche, C.F., Palmer, J.D., and Pace, N.R. (1996). Perspective on archaeal diversity, thermophily and monophyly from environmental rDNA sequences. Proc Natl Acad Sci USA 93:9188-9193.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 9188-9193
    • Barns, S.M.1    Delwiche, C.F.2    Palmer, J.D.3    Pace, N.R.4
  • 3
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong, E.F. (1992). Archaea in coastal marine environments. Proc Natl Acad Sci USA 89:5685-5689.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 5685-5689
    • DeLong, E.F.1
  • 4
    • 0024367905 scopus 로고
    • Natural relationships among sulfate-reducing eubacteria
    • Devereux, R., Delaney, M., Widdel, F., and Stahl, D.A. (1989). Natural relationships among sulfate-reducing eubacteria. J Bacterial 171:6689-6695.
    • (1989) J Bacterial , vol.171 , pp. 6689-6695
    • Devereux, R.1    Delaney, M.2    Widdel, F.3    Stahl, D.A.4
  • 5
    • 0028279051 scopus 로고
    • Evidence for phylogenetic congruence among sulfur-oxidizing chemoautotrophic bacterial endosymbionts and their bivalve hosts
    • Distel, D.L., Felbeck, H., and Cavanaugh, C.M. (1994). Evidence for phylogenetic congruence among sulfur-oxidizing chemoautotrophic bacterial endosymbionts and their bivalve hosts. J Mol Evol 38:533-542.
    • (1994) J Mol Evol , vol.38 , pp. 533-542
    • Distel, D.L.1    Felbeck, H.2    Cavanaugh, C.M.3
  • 6
    • 0027096383 scopus 로고
    • A methanogenic archaeon from Ace Lake, Antarctica Methanococcoides burtonii new-species
    • Franzmann, P.D., Springer, N., Ludwig, W., Demacario, E.C., and Rohde, M. (1992). A methanogenic archaeon from Ace Lake, Antarctica Methanococcoides burtonii new-species. Syst Appl Microbiol 15:573-581.
    • (1992) Syst Appl Microbiol , vol.15 , pp. 573-581
    • Franzmann, P.D.1    Springer, N.2    Ludwig, W.3    Demacario, E.C.4    Rohde, M.5
  • 7
    • 0026525546 scopus 로고
    • Novel major archaebacterial group from marine plankton
    • Fuhrman, J.A., McCallum, K., and Davis, A.A. (1992). Novel major archaebacterial group from marine plankton. Nature 356:148-149.
    • (1992) Nature , vol.356 , pp. 148-149
    • Fuhrman, J.A.1    McCallum, K.2    Davis, A.A.3
  • 8
    • 0027336561 scopus 로고
    • Phylogenetic biodiversity of subsurface marine microbial communities from the Atlantic and Pacific oceans
    • Fuhrman, J.A., McCallum, K., and Davis, A.A. (1993). Phylogenetic biodiversity of subsurface marine microbial communities from the Atlantic and Pacific oceans. Appl Environ Microbiol 59:1294-1302.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 1294-1302
    • Fuhrman, J.A.1    McCallum, K.2    Davis, A.A.3
  • 9
    • 0002458587 scopus 로고
    • Catyptogena community from landward slope of the Japan Trench and Mega shear
    • Fujioka, K., and Murayama, M. (1992). Catyptogena community from landward slope of the Japan Trench and Mega shear. Proc JAMSTEC Symp Deep Sea Res 8:17-27.
    • (1992) Proc JAMSTEC Symp Deep Sea Res , vol.8 , pp. 17-27
    • Fujioka, K.1    Murayama, M.2
  • 10
    • 0029035937 scopus 로고
    • Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejana
    • Haddad, A., Camacho, F., Durand, P., and Cary, S.C. (1995). Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejana. Appl Environ Microbiol 61:1679-1687.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1679-1687
    • Haddad, A.1    Camacho, F.2    Durand, P.3    Cary, S.C.4
  • 11
    • 0027502979 scopus 로고
    • Polymerase chain reaction amplification of naphthalene-catabolic and 16S rRNA gene sequences from indigenous sediment bacteria
    • Herrick, J.B., Madsen, E.L., Batt, C.A., and Ghiorse, W.C. (1993). Polymerase chain reaction amplification of naphthalene-catabolic and 16S rRNA gene sequences from indigenous sediment bacteria. Appl Environ Microbiol 59:687-694.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 687-694
    • Herrick, J.B.1    Madsen, E.L.2    Batt, C.A.3    Ghiorse, W.C.4
  • 12
    • 0029845340 scopus 로고    scopus 로고
    • Desulforhopalus vacuolatus gen. nov., sp. nov., a new moderately psychrophilic sulfate-reducing bacterium with gas vacuoles isolated from a temperate estuary
    • Isaksen, M.F., and Teske, A. (1996). Desulforhopalus vacuolatus gen. nov., sp. nov., a new moderately psychrophilic sulfate-reducing bacterium with gas vacuoles isolated from a temperate estuary. Arch Microbiol 166:160-168.
    • (1996) Arch Microbiol , vol.166 , pp. 160-168
    • Isaksen, M.F.1    Teske, A.2
  • 14
    • 0031196307 scopus 로고    scopus 로고
    • Molecular analyses of the sediment of the 11000-m deep Mariana Trench
    • Kato, C., Li, L., Tamaoka, J., and Horikoshi, K. (1997). Molecular analyses of the sediment of the 11000-m deep Mariana Trench. Extremophiles 1:117-123.
    • (1997) Extremophiles , vol.1 , pp. 117-123
    • Kato, C.1    Li, L.2    Tamaoka, J.3    Horikoshi, K.4
  • 15
    • 0003086355 scopus 로고    scopus 로고
    • Characteristics of deep-sea microorganisms adapted to an extreme environment
    • Fingerman, M., Nagabhushanam, R., and Thompson, M.F. (eds.). New Delhi: Oxford and IBH Publishing Co.
    • Kato, C., Inoue, A., and Horikoshi, K. (1998). Characteristics of deep-sea microorganisms adapted to an extreme environment. In: Fingerman, M., Nagabhushanam, R., and Thompson, M.F. (eds.). Marine Biotechnology, Vol. 2, Environmental Marine Biotechnology. New Delhi: Oxford and IBH Publishing Co., 33-61.
    • (1998) Marine Biotechnology, Vol. 2, Environmental Marine Biotechnology , vol.2 , pp. 33-61
    • Kato, C.1    Inoue, A.2    Horikoshi, K.3
  • 20
    • 0027062372 scopus 로고
    • Sulfate reduction using methane in sediments beneath a bathyal "cold seep" giant clam community off Hatsushima Island, Sagami Bay, Japan
    • Masuzawa, T., Handa, N., Kitagawa, H., and Kusakabe, M. (1992). Sulfate reduction using methane in sediments beneath a bathyal "cold seep" giant clam community off Hatsushima Island, Sagami Bay, Japan. Earth Planet Sci Lett 110:39-50.
    • (1992) Earth Planet Sci Lett , vol.110 , pp. 39-50
    • Masuzawa, T.1    Handa, N.2    Kitagawa, H.3    Kusakabe, M.4
  • 21
    • 0030765712 scopus 로고    scopus 로고
    • Intracellular occurrence of ε-proteo-bacterial 16S rDNA sequences in the vestimentiferan trophosome
    • Naganuma, T., Kato, C., Hirayama, H., Moriyama, N., Hashimoto, J., and Horikoshi, K. (1997). Intracellular occurrence of ε-Proteo-bacterial 16S rDNA sequences in the vestimentiferan trophosome. J Oceanography 53:193-197.
    • (1997) J Oceanography , vol.53 , pp. 193-197
    • Naganuma, T.1    Kato, C.2    Hirayama, H.3    Moriyama, N.4    Hashimoto, J.5    Horikoshi, K.6
  • 22
    • 38249033960 scopus 로고
    • Deep biological communities in the subduction zone of Japan from bottom photographs taken during "Nautile" dives in the Kaiko project
    • Ohta, S., and Laubier, L. (1987). Deep biological communities in the subduction zone of Japan from bottom photographs taken during "Nautile" dives in the Kaiko project. Earth Planet Sci Lett 83:329-342.
    • (1987) Earth Planet Sci Lett , vol.83 , pp. 329-342
    • Ohta, S.1    Laubier, L.2
  • 24
    • 17944385985 scopus 로고
    • Pathogenic bacteria encountered in diseases of alimentary origin
    • Rasolofonirina, R.N. (1989). Pathogenic bacteria encountered in diseases of alimentary origin. Arch Inst Pasteur Madag 57:81-88.
    • (1989) Arch Inst Pasteur Madag , vol.57 , pp. 81-88
    • Rasolofonirina, R.N.1
  • 25
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0024265906 scopus 로고
    • Cold-seep benthic communities in the Japan subduction zones: Geological control of community development
    • Sibuet, M., Juniper, S.K., and Pautot, G. (1988). Cold-seep benthic communities in the Japan subduction zones: geological control of community development. J Mar Res 46:333-348.
    • (1988) J Mar Res , vol.46 , pp. 333-348
    • Sibuet, M.1    Juniper, S.K.2    Pautot, G.3
  • 27
    • 0028079873 scopus 로고
    • Evolutionary relationships among ammonia-and nitrite-oxidizing bacteria
    • Teske, A., Alm, E., Regan, J.M., Toze, S., Rittmann, B.E., and Stahl, D.A. (1994). Evolutionary relationships among ammonia-and nitrite-oxidizing bacteria. J Bacteriol 176:6623-6630.
    • (1994) J Bacteriol , vol.176 , pp. 6623-6630
    • Teske, A.1    Alm, E.2    Regan, J.M.3    Toze, S.4    Rittmann, B.E.5    Stahl, D.A.6
  • 28
    • 0000301525 scopus 로고
    • Characteristics of two marine nitrite-oxidizing bacteria, Nitrospina gracilis nov. gen. nov. spec. and Nitrococcus mobilis nov. gen. nov. sp
    • Watson, S.W., and Waterbury, J.B. (1971). Characteristics of two marine nitrite-oxidizing bacteria, Nitrospina gracilis nov. gen. nov. spec. and Nitrococcus mobilis nov. gen. nov. sp. Arch Microbiol 77:203-230.
    • (1971) Arch Microbiol , vol.77 , pp. 203-230
    • Watson, S.W.1    Waterbury, J.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.