-
1
-
-
75949088274
-
DNA zip codes control an ancient mechanism for gene targeting to the nuclear periphery
-
Ahmed, S., D.G. Brickner, W.H. Light, I. Cajigas, M. McDonough, A.B. Froyshteter, T. Volpe, and J.H. Brickner. 2010. DNA zip codes control an ancient mechanism for gene targeting to the nuclear periphery. Nat. Cell Biol. 12:111-118. http://dx.doi.org/10.1038/ncb2011
-
(2010)
Nat. Cell Biol
, vol.12
, pp. 111-118
-
-
Ahmed, S.1
Brickner, D.G.2
Light, W.H.3
Cajigas, I.4
McDonough, M.5
Froyshteter, A.B.6
Volpe, T.7
Brickner, J.H.8
-
2
-
-
34250777112
-
The nuclear envelope and transcriptional control
-
Akhtar, A., and S.M. Gasser. 2007. The nuclear envelope and transcriptional control. Nat. Rev. Genet. 8:507-517. http://dx.doi.org/10.1038/nrg2122
-
(2007)
Nat. Rev. Genet
, vol.8
, pp. 507-517
-
-
Akhtar, A.1
Gasser, S.M.2
-
3
-
-
64249139132
-
RNA Pol II accumulates at promoters of growth genes during developmental arrest
-
Baugh, L.R., J. Demodena, and P.W. Sternberg. 2009. RNA Pol II accumulates at promoters of growth genes during developmental arrest. Science. 324:92-94. http://dx.doi.org/10.1126/science.1169628
-
(2009)
Science
, vol.324
, pp. 92-94
-
-
Baugh, L.R.1
Demodena, J.2
Sternberg, P.W.3
-
4
-
-
0344338368
-
Gene gating: a hypothesis
-
Blobel, G. 1985. Gene gating: a hypothesis. Proc. Natl. Acad. Sci. USA. 82: 8527-8529. http://dx.doi.org/10.1073/pnas.82.24.8527
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 8527-8529
-
-
Blobel, G.1
-
5
-
-
84874958024
-
Amino acid substitutions in the Caenorhabditis elegans RNA polymerase II large subunit AMA-1/ RPB-1 that result in a-amanitin resistance and/or reduced function
-
Bowman, E.A., D.L. Riddle, and W. Kelly. 2011. Amino acid substitutions in the Caenorhabditis elegans RNA polymerase II large subunit AMA-1/ RPB-1 that result in α-amanitin resistance and/or reduced function. G3 (Bethesda). 1:411-416. http://dx.doi.org/10.1534/g3.111.000968
-
(2011)
G3 (Bethesda)
, vol.1
, pp. 411-416
-
-
Bowman, E.A.1
Riddle, D.L.2
Kelly, W.3
-
6
-
-
14044266853
-
Gene recruitment of the activated INO1 locus to the nuclear membrane
-
Brickner, J.H., and P. Walter. 2004. Gene recruitment of the activated INO1 locus to the nuclear membrane. PLoS Biol. 2:e342. http://dx.doi.org/10.1371/ journal.pbio.0020342
-
(2004)
PLoS Biol
, vol.2
-
-
Brickner, J.H.1
Walter, P.2
-
7
-
-
34247341747
-
H2A Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state
-
Brickner, D.G., I. Cajigas, Y. Fondufe-Mittendorf, S. Ahmed, P.C. Lee, J. Widom, and J.H. Brickner. 2007. H2A.Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state. PLoS Biol. 5:e81. http://dx.doi.org/10.1371/journal.pbio.0050081
-
(2007)
PLoS Biol
, vol.5
-
-
Brickner, D.G.1
Cajigas, I.2
Fondufe-Mittendorf, Y.3
Ahmed, S.4
Lee, P.C.5
Widom, J.6
Brickner, J.H.7
-
8
-
-
84862128143
-
Transcription factor binding to a DNA zip code controls interchromosomal clustering at the nuclear periphery
-
Brickner, D.G., S. Ahmed, L. Meldi, A. Thompson, W. Light, M. Young, T.L. Hickman, F. Chu, E. Fabre, and J.H. Brickner. 2012. Transcription factor binding to a DNA zip code controls interchromosomal clustering at the nuclear periphery. Dev. Cell. 22:1234-1246. http://dx.doi.org/10.1016/j.devcel.2012.03.012
-
(2012)
Dev. Cell
, vol.22
, pp. 1234-1246
-
-
Brickner, D.G.1
Ahmed, S.2
Meldi, L.3
Thompson, A.4
Light, W.5
Young, M.6
Hickman, T.L.7
Chu, F.8
Fabre, E.9
Brickner, J.H.10
-
9
-
-
33745001795
-
SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope
-
Cabal, G.G., A. Genovesio, S. Rodriguez-Navarro, C. Zimmer, O. Gadal, A. Lesne, H. Buc, F. Feuerbach-Fournier, J.C. Olivo-Marin, E.C. Hurt, and U. Nehrbass. 2006. SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope. Nature. 441:770-773. http://dx.doi.org/10.1038/nature04752
-
(2006)
Nature
, vol.441
, pp. 770-773
-
-
Cabal, G.G.1
Genovesio, A.2
Rodriguez-Navarro, S.3
Zimmer, C.4
Gadal, O.5
Lesne, A.6
Buc, H.7
Feuerbach-Fournier, F.8
Olivo-Marin, J.C.9
Hurt, E.C.10
Nehrbass, U.11
-
10
-
-
2342501365
-
Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization
-
Casolari, J.M., C.R. Brown, S. Komili, J. West, H. Hieronymus, and P.A. Silver. 2004. Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization. Cell. 117:427-439. http://dx.doi.org/10.1016/S0092-8674(04)00448-9
-
(2004)
Cell
, vol.117
, pp. 427-439
-
-
Casolari, J.M.1
Brown, C.R.2
Komili, S.3
West, J.4
Hieronymus, H.5
Silver, P.A.6
-
11
-
-
77953589098
-
Connecting the transcription site to the nuclear pore: a multi-tether process that regulates gene expression
-
Dieppois, G., and F. Stutz. 2010. Connecting the transcription site to the nuclear pore: a multi-tether process that regulates gene expression. J. Cell Sci. 123:1989-1999. http://dx.doi.org/10.1242/jcs.053694
-
(2010)
J. Cell Sci
, vol.123
, pp. 1989-1999
-
-
Dieppois, G.1
Stutz, F.2
-
12
-
-
33750320374
-
Cotranscriptional recruitment to the mRNA export receptor Mex67p contributes to nuclear pore anchoring of activated genes
-
Dieppois, G., N. Iglesias, and F. Stutz. 2006. Cotranscriptional recruitment to the mRNA export receptor Mex67p contributes to nuclear pore anchoring of activated genes. Mol. Cell. Biol. 26:7858-7870. http://dx.doi.org/10.1128/MCB.00870-06
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 7858-7870
-
-
Dieppois, G.1
Iglesias, N.2
Stutz, F.3
-
13
-
-
79957814811
-
Gene positioning and expression
-
Egecioglu, D., and J.H. Brickner. 2011. Gene positioning and expression. Curr. Opin. Cell Biol. 23:338-345. http://dx.doi.org/10.1016/j.ceb.2011.01.001
-
(2011)
Curr. Opin. Cell Biol
, vol.23
, pp. 338-345
-
-
Egecioglu, D.1
Brickner, J.H.2
-
14
-
-
0028222344
-
Fine structure analyses of the Drosophila and Saccharomyces heat shock factor-heat shock element interactions
-
Fernandes, M., H. Xiao, and J.T. Lis. 1994. Fine structure analyses of the Drosophila and Saccharomyces heat shock factor-heat shock element interactions. Nucleic Acids Res. 22:167-173. http://dx.doi.org/10.1093/nar/22.2.167
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 167-173
-
-
Fernandes, M.1
Xiao, H.2
Lis, J.T.3
-
15
-
-
55049117864
-
Single-copy insertion of transgenes in Caenorhabditis elegans
-
Frøkjaer-Jensen, C., M.W. Davis, C.E. Hopkins, B.J. Newman, J.M. Thummel, S.P. Olesen, M. Grunnet, and E.M. Jorgensen. 2008. Single-copy insertion of transgenes in Caenorhabditis elegans. Nat. Genet. 40:1375-1383. http://dx.doi.org/10.1038/ng.248
-
(2008)
Nat. Genet
, vol.40
, pp. 1375-1383
-
-
Frøkjaer-Jensen, C.1
Davis, M.W.2
Hopkins, C.E.3
Newman, B.J.4
Thummel, J.M.5
Olesen, S.P.6
Grunnet, M.7
Jorgensen, E.M.8
-
17
-
-
78650410139
-
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project
-
Gerstein, M.B., Z.J. Lu, E.L. Van Nostrand, C. Cheng, B.I. Arshinoff, T. Liu, K.Y. Yip, R. Robilotto, A. Rechtsteiner, K. Ikegami, et al. 2010. Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science. 330:1775-1787. http://dx.doi.org/10.1126/science.1196914
-
(2010)
Science
, vol.330
, pp. 1775-1787
-
-
Gerstein, M.B.1
Lu, Z.J.2
Van Nostrand, E.L.3
Cheng, C.4
Arshinoff, B.I.5
Liu, T.6
Yip, K.Y.7
Robilotto, R.8
Rechtsteiner, A.9
Ikegami, K.10
-
18
-
-
84859386760
-
A negative feedback loop at the nuclear periphery regulates GAL gene expression
-
Green, E.M., Y. Jiang, R. Joyner, and K. Weis. 2012. A negative feedback loop at the nuclear periphery regulates GAL gene expression. Mol. Biol. Cell. 23:1367-1375. http://dx.doi.org/10.1091/mbc.E11-06-0547
-
(2012)
Mol. Biol. Cell
, vol.23
, pp. 1367-1375
-
-
Green, E.M.1
Jiang, Y.2
Joyner, R.3
Weis, K.4
-
19
-
-
78049440475
-
Chromatin landscape dictates HSF binding to target DNA elements
-
Guertin, M.J., and J.T. Lis. 2010. Chromatin landscape dictates HSF binding to target DNA elements. PLoS Genet. 6:e1001114. http://dx.doi.org/10.1371/journal.pgen.1001114
-
(2010)
PLoS Genet
, vol.6
-
-
Guertin, M.J.1
Lis, J.T.2
-
20
-
-
80052419343
-
Drosophila heat shock system as a general model to investigate transcriptional regulation
-
Guertin, M.J., S.J. Petesch, K.L. Zobeck, I.M. Min, and J.T. Lis. 2010. Drosophila heat shock system as a general model to investigate transcriptional regulation. Cold Spring Harb. Symp. Quant. Biol. 75:1-9. http://dx.doi.org/10.1101/sqb.2010.75.039
-
(2010)
Cold Spring Harb. Symp. Quant. Biol
, vol.75
, pp. 1-9
-
-
Guertin, M.J.1
Petesch, S.J.2
Zobeck, K.L.3
Min, I.M.4
Lis, J.T.5
-
21
-
-
0036110292
-
Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods
-
GuhaThakurta, D., L. Palomar, G.D. Stormo, P. Tedesco, T.E. Johnson, D.W. Walker, G. Lithgow, S. Kim, and C.D. Link. 2002. Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods. Genome Res. 12:701-712. http://dx.doi.org/10.1101/gr.228902
-
(2002)
Genome Res
, vol.12
, pp. 701-712
-
-
GuhaThakurta, D.1
Palomar, L.2
Stormo, G.D.3
Tedesco, P.4
Johnson, T.E.5
Walker, D.W.6
Lithgow, G.7
Kim, S.8
Link, C.D.9
-
22
-
-
11244344049
-
The L-type cyclin CYL-1 and the heat-shock-factor HSF-1 are required for heatshock-induced protein expression in Caenorhabditis elegans
-
Hajdu-Cronin, Y.M., W.J. Chen, and P.W. Sternberg. 2004. The L-type cyclin CYL-1 and the heat-shock-factor HSF-1 are required for heatshock-induced protein expression in Caenorhabditis elegans. Genetics. 168:1937-1949. http://dx.doi.org/10.1534/genetics.104.028423
-
(2004)
Genetics
, vol.168
, pp. 1937-1949
-
-
Hajdu-Cronin, Y.M.1
Chen, W.J.2
Sternberg, P.W.3
-
24
-
-
65249098363
-
Largescale chromatin structure of inducible genes: transcription on a condensed, linear template
-
Hu, Y., I. Kireev, M. Plutz, N. Ashourian, and A.S. Belmont. 2009. Largescale chromatin structure of inducible genes: transcription on a condensed, linear template. J. Cell Biol. 185:87-100. http://dx.doi.org/10.1083/jcb.200809196
-
(2009)
J. Cell Biol
, vol.185
, pp. 87-100
-
-
Hu, Y.1
Kireev, I.2
Plutz, M.3
Ashourian, N.4
Belmont, A.S.5
-
25
-
-
78349274999
-
Hsp70 gene association with nuclear speckles is Hsp70 promoter specific
-
Hu, Y., M. Plutz, and A.S. Belmont. 2010. Hsp70 gene association with nuclear speckles is Hsp70 promoter specific. J. Cell Biol. 191:711-719. http://dx.doi.org/10.1083/jcb.201004041
-
(2010)
J. Cell Biol
, vol.191
, pp. 711-719
-
-
Hu, Y.1
Plutz, M.2
Belmont, A.S.3
-
26
-
-
79551584898
-
Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2
-
Ikegami, K., T.A. Egelhofer, S. Strome, and J.D. Lieb. 2010. Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2. Genome Biol. 11:R120. http://dx.doi.org/10.1186/gb-2010-11-12-r120
-
(2010)
Genome Biol
, vol.11
-
-
Ikegami, K.1
Egelhofer, T.A.2
Strome, S.3
Lieb, J.D.4
-
27
-
-
0037205232
-
Chromatin boundaries in budding yeast: the nuclear pore connection
-
Ishii, K., G. Arib, C. Lin, G. Van Houwe, and U.K. Laemmli. 2002. Chromatin boundaries in budding yeast: the nuclear pore connection. Cell. 109: 551-562. http://dx.doi.org/10.1016/S0092-8674(02)00756-0
-
(2002)
Cell
, vol.109
, pp. 551-562
-
-
Ishii, K.1
Arib, G.2
Lin, C.3
Van Houwe, G.4
Laemmli, U.K.5
-
28
-
-
78650350837
-
Characterization of genome-nucleoporin interactions in Drosophila links chromatin insulators to the nuclear pore complex
-
Kalverda, B., and M. Fornerod. 2010. Characterization of genome-nucleoporin interactions in Drosophila links chromatin insulators to the nuclear pore complex. Cell Cycle. 9:4812-4817. http://dx.doi.org/10.4161/cc.9.24.14328
-
(2010)
Cell Cycle
, vol.9
, pp. 4812-4817
-
-
Kalverda, B.1
Fornerod, M.2
-
29
-
-
77954818442
-
Genome-nuclear lamina interactions and gene regulation
-
Kind, J., and B. van Steensel. 2010. Genome-nuclear lamina interactions and gene regulation. Curr. Opin. Cell Biol. 22:320-325. http://dx.doi.org/10.1016/j.ceb.2010.04.002
-
(2010)
Curr. Opin. Cell Biol
, vol.22
, pp. 320-325
-
-
Kind, J.1
van Steensel, B.2
-
30
-
-
73549090359
-
Multifunctional factor ENY2 is associated with the THO complex and promotes its recruitment onto nascent mRNA
-
Kopytova, D.V., A.V. Orlova, A.N. Krasnov, D.Y. Gurskiy, J.V. Nikolenko, E.N. Nabirochkina, Y.V. Shidlovskii, and S.G. Georgieva. 2010. Multifunctional factor ENY2 is associated with the THO complex and promotes its recruitment onto nascent mRNA. Genes Dev. 24:86-96. http://dx.doi.org/10.1101/gad.550010
-
(2010)
Genes Dev
, vol.24
, pp. 86-96
-
-
Kopytova, D.V.1
Orlova, A.V.2
Krasnov, A.N.3
Gurskiy, D.Y.4
Nikolenko, J.V.5
Nabirochkina, E.N.6
Shidlovskii, Y.V.7
Georgieva, S.G.8
-
31
-
-
37149020571
-
SAGA and a novel Drosophila export complex anchor efficient transcription and mRNA export to NPC
-
Kurshakova, M.M., A.N. Krasnov, D.V. Kopytova, Y.V. Shidlovskii, J.V. Nikolenko, E.N. Nabirochkina, D. Spehner, P. Schultz, L. Tora, and S.G. Georgieva. 2007. SAGA and a novel Drosophila export complex anchor efficient transcription and mRNA export to NPC. EMBO J. 26:4956-4965. http://dx.doi.org/10.1038/sj.emboj.7601901
-
(2007)
EMBO J
, vol.26
, pp. 4956-4965
-
-
Kurshakova, M.M.1
Krasnov, A.N.2
Kopytova, D.V.3
Shidlovskii, Y.V.4
Nikolenko, J.V.5
Nabirochkina, E.N.6
Spehner, D.7
Schultz, P.8
Tora, L.9
Georgieva, S.G.10
-
32
-
-
79955795581
-
Paused RNA polymerase II as a developmental checkpoint
-
Levine, M. 2011. Paused RNA polymerase II as a developmental checkpoint. Cell. 145:502-511. http://dx.doi.org/10.1016/j.cell.2011.04.021
-
(2011)
Cell
, vol.145
, pp. 502-511
-
-
Levine, M.1
-
33
-
-
0032706619
-
Direct observation of stress response in Caenorhabditis elegans using a reporter transgene
-
Link, C.D., J.R. Cypser, C.J. Johnson, and T.E. Johnson. 1999. Direct observation of stress response in Caenorhabditis elegans using a reporter transgene. Cell Stress Chaperones. 4:235-242. http://dx.doi.org/10.1379/14661268(1999)0040235:DOOSRI2.3.CO;2
-
(1999)
Cell Stress Chaperones
, vol.4
, pp. 235-242
-
-
Link, C.D.1
Cypser, J.R.2
Johnson, C.J.3
Johnson, T.E.4
-
34
-
-
77956039091
-
Visualizing yeast chromosomes and nuclear architecture
-
Meister, P., L.R. Gehlen, E. Varela, V. Kalck, and S.M. Gasser. 2010a. Visualizing yeast chromosomes and nuclear architecture. Methods Enzymol. 470: 535-567. http://dx.doi.org/10.1016/S0076-6879(10)70021-5
-
(2010)
Methods Enzymol
, vol.470
, pp. 535-567
-
-
Meister, P.1
Gehlen, L.R.2
Varela, E.3
Kalck, V.4
Gasser, S.M.5
-
35
-
-
77950920142
-
The spatial dynamics of tissue-specific promoters during C. elegans development
-
Meister, P., B.D. Towbin, B.L. Pike, A. Ponti, and S.M. Gasser. 2010b. The spatial dynamics of tissue-specific promoters during C. elegans development. Genes Dev. 24:766-782. http://dx.doi.org/10.1101/gad.559610
-
(2010)
Genes Dev
, vol.24
, pp. 766-782
-
-
Meister, P.1
Towbin, B.D.2
Pike, B.L.3
Ponti, A.4
Gasser, S.M.5
-
36
-
-
79953162695
-
Locking the genome: nuclear organization and cell fate
-
Meister, P., S. Mango, and S.M. Gasser. 2011. Locking the genome: nuclear organization and cell fate. Curr. Opin. Genet. Dev. 21:167-174. http://dx.doi.org/10.1016/j.gde.2011.01.023
-
(2011)
Curr. Opin. Genet. Dev
, vol.21
, pp. 167-174
-
-
Meister, P.1
Mango, S.2
Gasser, S.M.3
-
37
-
-
84855895036
-
Activator-induced spread of poly(ADP-ribose) polymerase promotes nucleosome loss at Hsp70
-
Petesch, S.J., and J.T. Lis. 2012. Activator-induced spread of poly(ADP-ribose) polymerase promotes nucleosome loss at Hsp70. Mol. Cell. 45:64-74. http://dx.doi.org/10.1016/j.molcel.2011.11.015
-
(2012)
Mol. Cell
, vol.45
, pp. 64-74
-
-
Petesch, S.J.1
Lis, J.T.2
-
38
-
-
33750129553
-
Creation of transgenic lines using microparticle bombardment methods
-
Praitis, V. 2006. Creation of transgenic lines using microparticle bombardment methods. Methods Mol. Biol. 351:93-107.
-
(2006)
Methods Mol. Biol.
, vol.351
, pp. 93-107
-
-
Praitis, V.1
-
39
-
-
10744233477
-
Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery
-
Rodríguez-Navarro, S., T. Fischer, M.J. Luo, O. Antúnez, S. Brettschneider, J. Lechner, J.E. Pérez-Ortín, R. Reed, and E. Hurt. 2004. Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery. Cell. 116:75-86. http://dx.doi.org/10.1016/S0092-8674(03)01025-0
-
(2004)
Cell
, vol.116
, pp. 75-86
-
-
Rodríguez-Navarro, S.1
Fischer, T.2
Luo, M.J.3
Antúnez, O.4
Brettschneider, S.5
Lechner, J.6
Pérez-Ortín, J.E.7
Reed, R.8
Hurt, E.9
-
40
-
-
41549103314
-
Modules for cloning-free chromatin tagging in Saccharomyces cerevisae
-
Rohner, S., S.M. Gasser, and P. Meister. 2008. Modules for cloning-free chromatin tagging in Saccharomyces cerevisae. Yeast. 25:235-239. http://dx.doi.org/10.1002/yea.1580
-
(2008)
Yeast
, vol.25
, pp. 235-239
-
-
Rohner, S.1
Gasser, S.M.2
Meister, P.3
-
41
-
-
0024282827
-
The RNA polymerase II molecule at the 5? end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged
-
Rougvie, A.E., and J.T. Lis. 1988. The RNA polymerase II molecule at the 5? end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged. Cell. 54:795-804. http://dx.doi.org/10.1016/S0092-8674(88)91087-2
-
(1988)
Cell
, vol.54
, pp. 795-804
-
-
Rougvie, A.E.1
Lis, J.T.2
-
42
-
-
84864634079
-
Tristetraprolin impairs myc-induced lymphoma and abolishes the malignant state
-
Rounbehler, R.J., M. Fallahi, C. Yang, M.A. Steeves, W. Li, J.R. Doherty, F.X. Schaub, S. Sanduja, D.A. Dixon, P.J. Blackshear, and J.L. Cleveland. 2012. Tristetraprolin impairs myc-induced lymphoma and abolishes the malignant state. Cell. 150:563-574. http://dx.doi.org/10.1016/j.cell.2012.06.033
-
(2012)
Cell
, vol.150
, pp. 563-574
-
-
Rounbehler, R.J.1
Fallahi, M.2
Yang, C.3
Steeves, M.A.4
Li, W.5
Doherty, J.R.6
Schaub, F.X.7
Sanduja, S.8
Dixon, D.A.9
Blackshear, P.J.10
Cleveland, J.L.11
-
43
-
-
70349847560
-
Revealing the high-resolution three-dimensional network of chromatin and interchromatin space: a novel electron-microscopic approach to reconstructing nuclear architecture
-
Rouquette, J., C. Genoud, G.H. Vazquez-Nin, B. Kraus, T. Cremer, and S. Fakan. 2009. Revealing the high-resolution three-dimensional network of chromatin and interchromatin space: a novel electron-microscopic approach to reconstructing nuclear architecture. Chromosome Res. 17: 801-810. http://dx.doi.org/10.1007/s10577-009-9070-x
-
(2009)
Chromosome Res
, vol.17
, pp. 801-810
-
-
Rouquette, J.1
Genoud, C.2
Vazquez-Nin, G.H.3
Kraus, B.4
Cremer, T.5
Fakan, S.6
-
44
-
-
31544471808
-
Nup-PI: the nucleopore-promoter interaction of genes in yeast
-
Schmid, M., G. Arib, C. Laemmli, J. Nishikawa, T. Durussel, and U.K. Laemmli. 2006. Nup-PI: the nucleopore-promoter interaction of genes in yeast. Mol. Cell. 21:379-391. http://dx.doi.org/10.1016/j.molcel.2005.12.012
-
(2006)
Mol. Cell
, vol.21
, pp. 379-391
-
-
Schmid, M.1
Arib, G.2
Laemmli, C.3
Nishikawa, J.4
Durussel, T.5
Laemmli, U.K.6
-
45
-
-
0037102566
-
CDK-9/cyclin T (P-TEFb) is required in two postinitiation pathways for transcription in the C. elegans embryo
-
Shim, E.Y., A.K. Walker, Y. Shi, and T.K. Blackwell. 2002. CDK-9/cyclin T (P-TEFb) is required in two postinitiation pathways for transcription in the C. elegans embryo. Genes Dev. 16:2135-2146. http://dx.doi.org/10.1101/gad.999002
-
(2002)
Genes Dev
, vol.16
, pp. 2135-2146
-
-
Shim, E.Y.1
Walker, A.K.2
Shi, Y.3
Blackwell, T.K.4
-
46
-
-
38449085292
-
Maintenance of C. elegans
-
Stiernagle, T. 2006. Maintenance of C. elegans. WormBook. http://dx.doi.org/10.1895/wormbook.1.101.1
-
(2006)
WormBook
-
-
Stiernagle, T.1
-
47
-
-
77953893804
-
The nuclear pore complex: bridging nuclear transport and gene regulation
-
Strambio-De-Castillia, C., M. Niepel, and M.P. Rout. 2010. The nuclear pore complex: bridging nuclear transport and gene regulation. Nat. Rev. Mol. Cell Biol. 11:490-501. http://dx.doi.org/10.1038/nrm2928
-
(2010)
Nat. Rev. Mol. Cell Biol
, vol.11
, pp. 490-501
-
-
Strambio-De-Castillia, C.1
Niepel, M.2
Rout, M.P.3
-
48
-
-
0027078293
-
Temporal and spatial expression patterns of the small heat shock (hsp16) genes in transgenic Caenorhabditis elegans
-
Stringham, E.G., D.K. Dixon, D. Jones, and E.P. Candido. 1992. Temporal and spatial expression patterns of the small heat shock (hsp16) genes in transgenic Caenorhabditis elegans. Mol. Biol. Cell. 3:221-233.
-
(1992)
Mol. Biol. Cell.
, vol.3
, pp. 221-233
-
-
Stringham, E.G.1
Dixon, D.K.2
Jones, D.3
Candido, E.P.4
-
49
-
-
33744977019
-
Nuclear pore association confers optimal expression levels for an inducible yeast gene
-
Taddei, A., G. Van Houwe, F. Hediger, V. Kalck, F. Cubizolles, H. Schober, and S.M. Gasser. 2006. Nuclear pore association confers optimal expression levels for an inducible yeast gene. Nature. 441:774-778. http://dx.doi.org/10.1038/nature04845
-
(2006)
Nature
, vol.441
, pp. 774-778
-
-
Taddei, A.1
Van Houwe, G.2
Hediger, F.3
Kalck, V.4
Cubizolles, F.5
Schober, H.6
Gasser, S.M.7
-
51
-
-
0035941485
-
Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans
-
Timmons, L., D.L. Court, and A. Fire. 2001. Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans. Gene. 263:103-112. http://dx.doi.org/10.1016/S0378-1119(00)00579-5
-
(2001)
Gene
, vol.263
, pp. 103-112
-
-
Timmons, L.1
Court, D.L.2
Fire, A.3
-
52
-
-
80052411398
-
Repetitive transgenes in C. elegans accumulate heterochromatic marks and are sequestered at the nuclear envelope in a copy-number-and lamin-dependent manner
-
Towbin, B.D., P. Meister, B.L. Pike, and S.M. Gasser. 2010. Repetitive transgenes in C. elegans accumulate heterochromatic marks and are sequestered at the nuclear envelope in a copy-number-and lamin-dependent manner. Cold Spring Harb. Symp. Quant. Biol. 75:555-565. http://dx.doi.org/10.1101/sqb.2010.75.041
-
(2010)
Cold Spring Harb. Symp. Quant. Biol
, vol.75
, pp. 555-565
-
-
Towbin, B.D.1
Meister, P.2
Pike, B.L.3
Gasser, S.M.4
-
53
-
-
84865687580
-
Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery
-
Towbin, B.D., C. González-Aguilera, R. Sack, D. Gaidatzis, V. Kalck, P. Meister, P. Askjaer, and S.M. Gasser. 2012. Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery. Cell. 150:934-947. http://dx.doi.org/10.1016/j.cell.2012.06.051
-
(2012)
Cell
, vol.150
, pp. 934-947
-
-
Towbin, B.D.1
González-Aguilera, C.2
Sack, R.3
Gaidatzis, D.4
Kalck, V.5
Meister, P.6
Askjaer, P.7
Gasser, S.M.8
-
54
-
-
1542373742
-
The role of heat shock transcription factor 1 in the genome-wide regulation of the mammalian heat shock response
-
Trinklein, N.D., J.I. Murray, S.J. Hartman, D. Botstein, and R.M. Myers. 2004. The role of heat shock transcription factor 1 in the genome-wide regulation of the mammalian heat shock response. Mol. Biol. Cell. 15:1254-1261. http://dx.doi.org/10.1091/mbc.E03-10-0738
-
(2004)
Mol. Biol. Cell.
, vol.15
, pp. 1254-1261
-
-
Trinklein, N.D.1
Murray, J.I.2
Hartman, S.J.3
Botstein, D.4
Myers, R.M.5
-
55
-
-
0033612538
-
Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain
-
Tumbar, T., G. Sudlow, and A.S. Belmont. 1999. Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain. J. Cell Biol. 145:1341-1354. http://dx.doi.org/10.1083/jcb.145.7.1341
-
(1999)
J. Cell Biol
, vol.145
, pp. 1341-1354
-
-
Tumbar, T.1
Sudlow, G.2
Belmont, A.S.3
-
56
-
-
0033895231
-
High resolution analysis of interphase chromosome domains
-
Visser, A.E., F. Jaunin, S. Fakan, and J.A. Aten. 2000. High resolution analysis of interphase chromosome domains. J. Cell Sci. 113:2585-2593.
-
(2000)
J. Cell Sci.
, vol.113
, pp. 2585-2593
-
-
Visser, A.E.1
Jaunin, F.2
Fakan, S.3
Aten, J.A.4
-
57
-
-
84859350087
-
RNAi keeps Atf1-bound stress response genes in check at nuclear pores
-
Woolcock, K.J., R. Stunnenberg, D. Gaidatzis, H.R. Hotz, S. Emmerth, P. Barraud, and M. Bühler. 2012. RNAi keeps Atf1-bound stress response genes in check at nuclear pores. Genes Dev. 26:683-692. http://dx.doi.org/10.1101/gad.186866.112
-
(2012)
Genes Dev
, vol.26
, pp. 683-692
-
-
Woolcock, K.J.1
Stunnenberg, R.2
Gaidatzis, D.3
Hotz, H.R.4
Emmerth, S.5
Barraud, P.6
Bühler, M.7
-
58
-
-
0025965278
-
Cooperative binding of Drosophila heat shock factor to arrays of a conserved 5 bp unit
-
Xiao, H., O. Perisic, and J.T. Lis. 1991. Cooperative binding of Drosophila heat shock factor to arrays of a conserved 5 bp unit. Cell. 64:585-593. http://dx.doi.org/10.1016/0092-8674(91)90242-Q
-
(1991)
Cell
, vol.64
, pp. 585-593
-
-
Xiao, H.1
Perisic, O.2
Lis, J.T.3
-
59
-
-
37349099448
-
Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation
-
Yao, J., M.B. Ardehali, C.J. Fecko, W.W. Webb, and J.T. Lis. 2007. Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation. Mol. Cell. 28:978-990. http://dx.doi.org/10.1016/j.molcel.2007.10.017
-
(2007)
Mol. Cell
, vol.28
, pp. 978-990
-
-
Yao, J.1
Ardehali, M.B.2
Fecko, C.J.3
Webb, W.W.4
Lis, J.T.5
-
60
-
-
77952388801
-
Actin-related protein Arp6 influences H2A Z-dependent and -independent gene expression and links ribosomal protein genes to nuclear pores
-
Yoshida, T., K. Shimada, Y. Oma, V. Kalck, K. Akimura, A. Taddei, H. Iwahashi, K. Kugou, K. Ohta, S.M. Gasser, and M. Harata. 2010. Actin-related protein Arp6 influences H2A.Z-dependent and -independent gene expression and links ribosomal protein genes to nuclear pores. PLoS Genet. 6:e1000910. http://dx.doi.org/10.1371/journal.pgen.1000910
-
(2010)
PLoS Genet
, vol.6
-
-
Yoshida, T.1
Shimada, K.2
Oma, Y.3
Kalck, V.4
Akimura, K.5
Taddei, A.6
Iwahashi, H.7
Kugou, K.8
Ohta, K.9
Gasser, S.M.10
Harata, M.11
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