메뉴 건너뛰기




Volumn 26, Issue 7, 2012, Pages 683-692

RNAi keeps Atf1-bound stress response genes in check at nuclear pores

Author keywords

Atf1 transcription factor; CTGS; NPC; RNAi; Stress response; Thermoswitch

Indexed keywords

ACTIVATING TRANSCRIPTION FACTOR 1; DICER;

EID: 84859350087     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.186866.112     Document Type: Article
Times cited : (51)

References (35)
  • 3
    • 3042712133 scopus 로고    scopus 로고
    • The fission yeast Nup107-120 complex functionally interacts with the small GTPase Ran/Spi1 and is required for mRNA export, nuclear pore distribution, and proper cell division
    • Bai SW, Rouquette J, Umeda M, Faigle W, Loew D, Sazer S, Doye V. 2004. The fission yeast Nup107-120 complex functionally interacts with the small GTPase Ran/Spi1 and is required for mRNA export, nuclear pore distribution, and proper cell division. Mol Cell Biol 24: 6379-6392.
    • (2004) Mol Cell Biol , vol.24 , pp. 6379-6392
    • Bai, S.W.1    Rouquette, J.2    Umeda, M.3    Faigle, W.4    Loew, D.5    Sazer, S.6    Doye, V.7
  • 4
    • 80054907588 scopus 로고    scopus 로고
    • An extended dsRBD with a novel zinc-binding motif mediates nuclear retention of fission yeast Dicer
    • Barraud P, Emmerth S, Shimada Y, Hotz HR, Allain FH, Buhler M. 2011. An extended dsRBD with a novel zinc-binding motif mediates nuclear retention of fission yeast Dicer. EMBO J 30: 4223-4235.
    • (2011) EMBO J , vol.30 , pp. 4223-4235
    • Barraud, P.1    Emmerth, S.2    Shimada, Y.3    Hotz, H.R.4    Allain, F.H.5    Buhler, M.6
  • 5
    • 33646923128 scopus 로고    scopus 로고
    • Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing
    • Buhler M, Verdel A, Moazed D. 2006. Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing. Cell 125: 873-886.
    • (2006) Cell , vol.125 , pp. 873-886
    • Buhler, M.1    Verdel, A.2    Moazed, D.3
  • 6
    • 34249057729 scopus 로고    scopus 로고
    • RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing
    • Buhler M, Haas W, Gygi SP, Moazed D. 2007. RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing. Cell 129: 707-721.
    • (2007) Cell , vol.129 , pp. 707-721
    • Buhler, M.1    Haas, W.2    Gygi, S.P.3    Moazed, D.4
  • 7
    • 33847680437 scopus 로고    scopus 로고
    • Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast
    • Buker SM, Iida T, Buhler M, Villen J, Gygi SP, Nakayama J, Moazed D. 2007. Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast. Nat Struct Mol Biol 14: 200-207.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 200-207
    • Buker, S.M.1    Iida, T.2    Buhler, M.3    Villen, J.4    Gygi, S.P.5    Nakayama, J.6    Moazed, D.7
  • 8
    • 23044498502 scopus 로고    scopus 로고
    • Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome
    • Cam HP, Sugiyama T, Chen ES, Chen X, FitzGerald PC, Grewal SI. 2005. Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome. Nat Genet 37: 809-819.
    • (2005) Nat Genet , vol.37 , pp. 809-819
    • Cam, H.P.1    Sugiyama, T.2    Chen, E.S.3    Chen, X.4    Fitzgerald, P.C.5    Grewal, S.I.6
  • 11
    • 74049138689 scopus 로고    scopus 로고
    • Nuclear retention of fission yeast dicer is a prerequisite for RNAi-mediated heterochromatin assembly
    • Emmerth S, Schober H, Gaidatzis D, Roloff T, Jacobeit K, Buhler M. 2010. Nuclear retention of fission yeast dicer is a prerequisite for RNAi-mediated heterochromatin assembly. Dev Cell 18: 102-113.
    • (2010) Dev Cell , vol.18 , pp. 102-113
    • Emmerth, S.1    Schober, H.2    Gaidatzis, D.3    Roloff, T.4    Jacobeit, K.5    Buhler, M.6
  • 14
    • 69949117622 scopus 로고    scopus 로고
    • Multivesicular bodies associate with components of miRNA effector complexes and modulate miRNA activity
    • Gibbings DJ, Ciaudo C, Erhardt M, Voinnet O. 2009. Multivesicular bodies associate with components of miRNA effector complexes and modulate miRNA activity. Nat Cell Biol 11: 1143-1149.
    • (2009) Nat Cell Biol , vol.11 , pp. 1143-1149
    • Gibbings, D.J.1    Ciaudo, C.2    Erhardt, M.3    Voinnet, O.4
  • 15
    • 76749104253 scopus 로고    scopus 로고
    • Dicer-independent primal RNAs trigger RNAi and heterochromatin formation
    • Halic M, Moazed D. 2010. Dicer-independent primal RNAs trigger RNAi and heterochromatin formation. Cell 140: 504-516.
    • (2010) Cell , vol.140 , pp. 504-516
    • Halic, M.1    Moazed, D.2
  • 16
    • 79952509006 scopus 로고    scopus 로고
    • piRNA-associated germline nuage formation and spermatogenesis require MitoPLD profusogenic mitochondrial-surface lipid signaling
    • Huang H, Gao Q, Peng X, Choi SY, Sarma K, Ren H, Morris AJ, Frohman MA. 2011. piRNA-associated germline nuage formation and spermatogenesis require MitoPLD profusogenic mitochondrial-surface lipid signaling. Dev Cell 20: 376-387.
    • (2011) Dev Cell , vol.20 , pp. 376-387
    • Huang, H.1    Gao, Q.2    Peng, X.3    Choi, S.Y.4    Sarma, K.5    Ren, H.6    Morris, A.J.7    Frohman, M.A.8
  • 17
    • 33747856481 scopus 로고    scopus 로고
    • Transcript mapping with high-density oligonucleotide tiling arrays
    • Huber W, Toedling J, Steinmetz LM. 2006. Transcript mapping with high-density oligonucleotide tiling arrays. Bioinformatics 22: 1963-1970.
    • (2006) Bioinformatics , vol.22 , pp. 1963-1970
    • Huber, W.1    Toedling, J.2    Steinmetz, L.M.3
  • 18
    • 0030305457 scopus 로고    scopus 로고
    • R: A language for data analysis and graphics
    • Ihaka R, Gentleman R. 1996. R: A language for data analysis and graphics. J Comput Graph Statist 5: 299-314.
    • (1996) J Comput Graph Statist , vol.5 , pp. 299-314
    • Ihaka, R.1    Gentleman, R.2
  • 19
    • 0031444273 scopus 로고    scopus 로고
    • Transcription factor Mts1/Mts2 (Atf1/Pcr1, Gad7/Pcr1) activates the M26 meiotic recombination hotspot in Schizosaccharomyces pombe
    • Kon N, Krawchuk MD, Warren BG, Smith GR, Wahls WP. 1997. Transcription factor Mts1/Mts2 (Atf1/Pcr1, Gad7/Pcr1) activates the M26 meiotic recombination hotspot in Schizosaccharomyces pombe. Proc Natl Acad Sci 94: 13765-13770.
    • (1997) Proc Natl Acad Sci , vol.94 , pp. 13765-13770
    • Kon, N.1    Krawchuk, M.D.2    Warren, B.G.3    Smith, G.R.4    Wahls, W.P.5
  • 20
    • 34247167146 scopus 로고    scopus 로고
    • Regulation of Schizosaccharomyces pombe Atf1 protein levels by Sty1-mediated phosphorylation and heterodimerization with Pcr1
    • Lawrence CL, Maekawa H, Worthington JL, Reiter W, Wilkinson CR, Jones N. 2007. Regulation of Schizosaccharomyces pombe Atf1 protein levels by Sty1-mediated phosphorylation and heterodimerization with Pcr1. J Biol Chem 282: 5160-5170.
    • (2007) J Biol Chem , vol.282 , pp. 5160-5170
    • Lawrence, C.L.1    Maekawa, H.2    Worthington, J.L.3    Reiter, W.4    Wilkinson, C.R.5    Jones, N.6
  • 21
    • 58749097426 scopus 로고    scopus 로고
    • Small RNAs in transcriptional gene silencing and genome defence
    • Moazed D. 2009. Small RNAs in transcriptional gene silencing and genome defence. Nature 457: 413-420.
    • (2009) Nature , vol.457 , pp. 413-420
    • Moazed, D.1
  • 22
    • 10944248935 scopus 로고    scopus 로고
    • Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs
    • Motamedi MR, Verdel A, Colmenares SU, Gerber SA, Gygi SP, Moazed D. 2004. Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs. Cell 119: 789-802.
    • (2004) Cell , vol.119 , pp. 789-802
    • Motamedi, M.R.1    Verdel, A.2    Colmenares, S.U.3    Gerber, S.A.4    Gygi, S.P.5    Moazed, D.6
  • 23
    • 37249005205 scopus 로고    scopus 로고
    • The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability
    • Niesen FH, Berglund H, Vedadi M. 2007. The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability. Nat Protoc 2: 2212-2221.
    • (2007) Nat Protoc , vol.2 , pp. 2212-2221
    • Niesen, F.H.1    Berglund, H.2    Vedadi, M.3
  • 24
    • 18844393446 scopus 로고    scopus 로고
    • The nuclear rim protein Amo1 is required for proper microtubule cytoskeleton organisation in fission yeast
    • Pardo M, Nurse P. 2005. The nuclear rim protein Amo1 is required for proper microtubule cytoskeleton organisation in fission yeast. J Cell Sci 118: 1705-1714.
    • (2005) J Cell Sci , vol.118 , pp. 1705-1714
    • Pardo, M.1    Nurse, P.2
  • 26
    • 0030868257 scopus 로고    scopus 로고
    • Trehalose synthesis is important for the acquisition of thermotolerance in Schizosaccharomyces pombe
    • Ribeiro MJ, Reinders A, Boller T, Wiemken A, De Virgilio C. 1997. Trehalose synthesis is important for the acquisition of thermotolerance in Schizosaccharomyces pombe. Mol Microbiol 25: 571-581.
    • (1997) Mol Microbiol , vol.25 , pp. 571-581
    • Ribeiro, M.J.1    Reinders, A.2    Boller, T.3    Wiemken, A.4    de Virgilio, C.5
  • 27
    • 41549103314 scopus 로고    scopus 로고
    • Modules for cloning-free chromatin tagging in Saccharomyces cerevisae
    • Rohner S, Gasser SM, Meister P. 2008. Modules for cloning-free chromatin tagging in Saccharomyces cerevisae. Yeast 25: 235-239.
    • (2008) Yeast , vol.25 , pp. 235-239
    • Rohner, S.1    Gasser, S.M.2    Meister, P.3
  • 28
    • 70349182521 scopus 로고    scopus 로고
    • The Schizosaccharomyces pombe Hsp104 disaggregase is unable to propagate the [PSI] prion
    • doi:10.1371/journal.pone.0006939
    • Senechal P, Arseneault G, Leroux A, Lindquist S, Rokeach LA. 2009. The Schizosaccharomyces pombe Hsp104 disaggregase is unable to propagate the [PSI] prion. PLoS ONE 4: e6939. doi: 10.1371/journal.pone.0006939.
    • (2009) PLoS ONE , vol.4
    • Senechal, P.1    Arseneault, G.2    Leroux, A.3    Lindquist, S.4    Rokeach, L.A.5
  • 29
    • 78449246729 scopus 로고    scopus 로고
    • Continuous requirement for the Clr4 complex but not RNAi for centromeric heterochromatin assembly in fission yeast harboring a disrupted RITS complex
    • doi:10.1371/journal.pgen.1001174
    • Shanker S, Job G, George OL, Creamer KM, Shaban A, Partridge JF. 2010. Continuous requirement for the Clr4 complex but not RNAi for centromeric heterochromatin assembly in fission yeast harboring a disrupted RITS complex. PLoS Genet 6: e1001174. doi: 10.1371/journal.pgen.1001174.
    • (2010) PLoS Genet , vol.6
    • Shanker, S.1    Job, G.2    George, O.L.3    Creamer, K.M.4    Shaban, A.5    Partridge, J.F.6
  • 30
    • 1942503933 scopus 로고    scopus 로고
    • Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins
    • Taddei A, Hediger F, Neumann FR, Bauer C, Gasser SM. 2004. Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins. EMBO J 23: 1301-1312.
    • (2004) EMBO J , vol.23 , pp. 1301-1312
    • Taddei, A.1    Hediger, F.2    Neumann, F.R.3    Bauer, C.4    Gasser, S.M.5
  • 32
    • 0037072661 scopus 로고    scopus 로고
    • Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi
    • Volpe TA, Kidner C, Hall IM, Teng G, Grewal SI, Martienssen RA. 2002. Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 297: 1833-1837.
    • (2002) Science , vol.297 , pp. 1833-1837
    • Volpe, T.A.1    Kidner, C.2    Hall, I.M.3    Teng, G.4    Grewal, S.I.5    Martienssen, R.A.6
  • 34
    • 78650966598 scopus 로고    scopus 로고
    • Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe
    • Woolcock KJ, Gaidatzis D, Punga T, Buhler M. 2011. Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe. Nat Struct Mol Biol 18: 94-99.
    • (2011) Nat Struct Mol Biol , vol.18 , pp. 94-99
    • Woolcock, K.J.1    Gaidatzis, D.2    Punga, T.3    Buhler, M.4
  • 35
    • 17844389629 scopus 로고    scopus 로고
    • Hsp16p is required for thermotolerance in nuclear mRNA export in fission yeast Schizosaccharomyces pombe
    • Yoshida J, Tani T. 2005. Hsp16p is required for thermotolerance in nuclear mRNA export in fission yeast Schizosaccharomyces pombe. Cell Struct Funct 29: 125-138.
    • (2005) Cell Struct Funct , vol.29 , pp. 125-138
    • Yoshida, J.1    Tani, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.