Marked host specificity and lack of phylogeographic population structure of Campylobacter jejuni in wild birds

Molecular Ecology

Volumn 22, Issue 5, 2013, Pages 1463-1472

  Griekspoor, Petra ^a   Colles, Frances M ^b   McCarthy, Noel D ^b   Hansbro, Philip M ^c   Ashhurst Smith, Chris ^c   Olsen, Björn ^d   Hasselquist, Dennis ^e   Maiden, Martin C J ^b   Waldenström, Jonas ^a  

^a LINNAEUS UNIVERSITY   (Sweden)

^b UNIVERSITY OF OXFORD   (United Kingdom)

^c UNIVERSITY OF NEWCASTLE   (Australia)

^d UPPSALA UNIVERSITY   (Sweden)

^e LUND UNIVERSITY   (Sweden)

Author keywords

disease emergence; epidemiology; host associations; Zoonotic disease

Indexed keywords

ANIMAL; ANIMAL DISEASE; ARTICLE; AUSTRALIA; BIRD; BIRD DISEASE; CAMPYLOBACTER JEJUNI; CAMPYLOBACTERIOSIS; DNA SEQUENCE; DOMESTIC ANIMAL; EUROPE; FEMALE; GENE FREQUENCY; GENE LOCUS; GENETICS; GENOTYPE; HOST RANGE; HUMAN; ISOLATION AND PURIFICATION; MALE; MICROBIOLOGY; PHYLOGENY; PHYLOGEOGRAPHY; SEQUENCE ALIGNMENT; VIRULENCE; WILD ANIMAL;

ANIMALS; ANIMALS, DOMESTIC; ANIMALS, WILD; AUSTRALIA; BIRD DISEASES; BIRDS; CAMPYLOBACTER INFECTIONS; CAMPYLOBACTER JEJUNI; EUROPE; FEMALE; GENE FREQUENCY; GENETIC LOCI; GENOTYPE; HOST SPECIFICITY; HUMANS; MALE; PHYLOGENY; PHYLOGEOGRAPHY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; VIRULENCE;

ANIMALIA; AVES; BACTERIA (MICROORGANISMS); CAMPYLOBACTER JEJUNI;

EID: 84874405060     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/mec.12144     Document Type: Article

References (62)

1. Baker S, Hanage WP, Holt KE, (2010) Navigating the future of bacterial molecular epidemiology. Current Opinion in Microbiology, 13, 640-645.
2. Broman T, Palmgren H, Bergström S, et al,. (2002) Campylobacter jejuni in black-headed gulls (Larus ridibundus): prevalence, genotypes, and influence on C. jejuni epidemiology. Journal of Clinical Microbiology, 40, 4594-4602.
3. Broman T, Waldenström J, Dahlgren D, Carlsson I, Eliasson I, Olsen B, (2004) Diversities and similarities in PFGE profiles of Campylobacter jejuni isolated from migrating birds and humans. Journal of Applied Microbiology, 96, 834-843.
4. Cawthraw SA, Wassenaar TM, Ayling R, Newell DG, (1996) Increased colonization potential of Campylobacter jejuni strain 81116 after passage through chickens and its implication on the rate of transmission within flocks. Epidemiology and Infection, 117, 213-215.
5. Cleaveland S, Laurenson MK, Taylor LH, (2001) Diseases of humans and their domestic mammals: pathogen characteristics, host range and the risk of emergence. Philosophical Transactions of the Royal Society London B: Biological Science, 356, 991-999.
6. Cohan FM, Koeppel AF, (2008) The origins of ecological diversity in prokaryotes. Current Biology, 18, R1024-R1034.
7. Colles FM, Jones K, Harding RM, Maiden MC, (2003) Genetic diversity of Campylobacter jejuni isolates from farm animals and the farm environment. Applied and Environmental Microbiology, 69, 7409-7413.
8. Colles FM, Dingle KE, Cody AJ, Maiden MC, (2008a) Comparison of Campylobacter populations in wild geese with those in starlings and free-range poultry on the same farm. Applied and Environmental Microbiology, 74, 3583-3590.
9. Colles FM, Jones TA, McCarthy ND, et al,. (2008b) Campylobacter infection of broiler chickens in a free-range environment. Environmental Microbiology, 10, 2042-2050.
10. Colles FM, McCarthy ND, Howe JC, et al,. (2009) Dynamics of Campylobacter colonization of a natural host, Sturnus vulgaris (European starling). Environmental Microbiology, 11, 258-267.
11. Cools I, Uyttendaele M, Caro C, D'Haese C, Nelis HJ, Debevere J, (2003) Survival of Campylobacter jejuni strains of different origin in drinking water. Journal of Applied Microbiology, 94, 886-892.
12. Dasti JI, Tareen AM, Lugert R, Zautner AE, Gross U, (2010) Campylobacter jejuni: a brief overview on pathogenicity-associated factors and disease-mediating mechanisms. International Journal of Medical Microbiology, 300, 205-211.
13. Daszak P, Cunningham AA, Hyatt AD, (2000) Emerging infectious diseases of wildlife-threats to biodiversity and human health. Science, 287, 443-449.
14. Didelot X, Falush D, (2007) Inference of bacterial microevolution using multilocus sequence data. Genetics, 175, 1251-1266.
15. Dingle KE, Maiden MC, (2005) Population genetics of Campylobacter jejuni. In: Campylobacter: Molecular and Cellular Biology (eds, Ketley JM, &, Konkel ME,), pp. 43-57. Wymondham, Horizon Bioscience.
16. Dingle KE, Colles FM, Wareing DR, et al,. (2001) Multilocus sequence typing system for Campylobacter jejuni. Journal of Clinical Microbiology, 39, 14-23.
17. Dingle KE, Colles FM, Ure R, et al,. (2002) Molecular characterization of Campylobacter jejuni clones: a basis for epidemiologic investigation. Emerging Infectious Disease, 8, 949-955.
18. Dingle KE, McCarthy ND, Cody AJ, Peto TE, Maiden MC, (2008) Extended sequence typing of Campylobacter spp., United Kingdom. Emerging Infectious Disease, 14, 1620-1622.
19. Falush D, Stephens M, Pritchard JK, (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics, 164, 1567-1587.
20. Feil EJ, Li BC, Aanensen DM, Hanage WP, Spratt BG, (2004) eBURST: Inferring Patterns of Evolutionary Descent among Clusters of Related Bacterial Genotypes from Multilocus Sequence Typing Data. Journal of Bacteriology, 186, 1518-1530.
21. Fenton A, Pedersen AB, (2005) Community epidemiology framework for classifying disease threats. Emerging Infectious Disease, 11, 1815-1821.
22. Francisco AP, Bugalho M, Ramirez M, Carrico JA, (2009) Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach. BMC Bioinformatics, 10, 152.
23. French N, Barrigas M, Brown P, et al,. (2005) Spatial epidemiology and natural population structure of Campylobacter jejuni colonizing a farmland ecosystem. Environmental Microbiology, 7, 1116-1126.
24. French NP, Midwinter A, Holland B, et al,. (2009) Molecular epidemiology of Campylobacter jejuni isolates from wild-bird fecal material in children's playgrounds. Applied Environmental Microbiology, 75, 779-783.
25. Fukuyama M, Kamimura T, Itoh T, et al,. (1986) Distribution of Campylobacter jejuni in wild birds and serogroup of isolates by slide agglutination technique. Nippon Juigaku Zasshi, 48, 487-493.
26. Hansbro PM, Warner S, Tracey JP, et al,. (2010) Surveillance and analysis of avian influenza viruses, Australia. Emerging Infectious Disease, 16, 1896-1904.
27. Hermans D, Van Deun K, Martel A, et al,. (2011) Colonization factors of Campylobacter jejuni in the chicken gut. Veterinary Research, 42, 82.
28. Higgins PJ, Peter JM, Cowling SJ, (2006) Handbook of Australian. New Zealand & Antarctic birds Oxford University press, Melbourne.
29. Hotchkiss EJ, Hodgson JC, Lainson FA, Zadoks RN, (2011) Multilocus sequence typing of a global collection of Pasteurella multocida isolates from cattle and other host species demonstrates niche association. BMC Microbiology, 11, 115.
30. Humphrey T, O'Brien S, Madsen M, (2007) Campylobacters as zoonotic pathogens: a food production perspective. International Journal of Food Microbiology, 117, 237-257.
31. Jolley KA, Maiden MC, (2010) BIGSdb: Scalable Analysis of Bacterial Genome Variation at the Population Level. BMC Bioinformatics, 11, 595.
32. Kapperud G, Rosef O, (1983) Avian wildlife reservoir of Campylobacter fetus subsp. jejuni, Yersinia spp., and Salmonella spp. in Norway. Applied Environmental Microbiology, 45, 375-380.
33. Kinana AD, Cardinale E, Tall F, et al,. (2006) Genetic diversity and quinolone resistance in Campylobacter jejuni isolates from poultry in Senegal. Applied Environmental Microbiology, 72, 3309-3313.
34. Kumar S, Tamura K, Jakobsen IB, Nei M, (2001) MEGA2: Molecular Evolutionary Genetics Analysis Software. Bioinformatics, 17, 1244-1245.
35. Luechtefeld NA, Blaser MJ, Reller LB, Wang WL, (1980) Isolation of Campylobacter fetus subsp. jejuni from migratory waterfowl. Journal of Clinical Microbiology, 12, 406-408.
36. Manning G, Duim B, Wassenaar T, Wagenaar JA, Ridley A, Newell DG, (2001) Evidence for a genetically stable strain of Campylobacter jejuni. Applied Environmental Microbiology, 67, 1185-1189.
37. Manning G, Dowson CG, Bagnall MC, Ahmed IH, West M, Newell DG, (2003) Multilocus sequence typing for comparison of veterinary and human isolates of Campylobacter jejuni. Applied Environmental Microbiology, 69, 6370-6379.
38. McCarthy ND, Colles FM, Dingle KE, et al,. (2007) Host-associated genetic import in Campylobacter jejuni. Emerging Infectious Disease, 13, 267-272.
39. Meinersmann RJ, (2000) Population genetics and genealogy of Campylobacter jejuni. In: Campylobacter (eds, Nachamkin I, Blaser MJ,), p. 351. American Society for Microbiology, Washington.
40. Mickan L, Doyle R, Valcanis M, Dingle KE, Unicomb L, Lanser J, (2007) Multilocus sequence typing of Campylobacter jejuni isolates from New South Wales, Australia. Journal of Applied Microbiology, 102, 144-152.
41. Obiri-Danso K, Paul N, Jones K, (2001) The effects of UVB and temperature on the survival of natural populations and pure cultures of Campylobacter jejuni, C. coli, C. lari and urease-positive thermophilic campylobacters (UPTC) in surface waters. Journal of Applied Microbiology, 90, 256-267.
42. On SL, Jordan PJ, (2003) Evaluation of 11 PCR assays for species-level identification of Campylobacter jejuni and Campylobacter coli. Journal of Clinical Microbiology, 41, 330-336.
43. Payne RE, Lee MD, Dreesen DW, Barnhart HM, (1999) Molecular epidemiology of Campylobacter jejuni in broiler flocks using randomly amplified polymorphic DNA-PCR and 23S rRNA-PCR and role of litter in its transmission. Applied Environmental Microbiology, 65, 260-263.
44. Rosef O, Kapperud G, (1983) House flies (Musca domestica) as possible vectors of Campylobacter fetus subsp. jejuni. Applied Environmental Microbiology, 45, 381-383.
45. Rosef O, Kapperud G, Lauwers S, Gondrosen B, (1985) Serotyping of Campylobacter jejuni, Campylobacter coli, and Campylobacter laridis from domestic and wild animals. Applied Environmental Microbiology, 49, 1507-1510.
46. Rozas J, Sanchez-DelBarrio JC, Messeguer X, Rozas R, (2003) DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics, 19, 2496-2497.
47. Schneider S, Roessli D, Excoffer L, (2000) Arlequin Version 2.00: An Integrated Program for Molecular Population Genetics and Molecular Evolution Analysis. University of Geneva, Geneva, Switzerland.
48. Schouls LM, Reulen S, Duim B, et al,. (2003) Comparative genotyping of Campylobacter jejuni by amplified fragment length polymorphism, multilocus sequence typing, and short repeat sequencing: strain diversity, host range, and recombination. Journal of Clinical Microbiology, 41, 15-26.
49. Sheppard SK, McCarthy ND, Falush D, Maiden MC, (2008) Convergence of Campylobacter species: implications for bacterial evolution. Science, 320, 237-239.
50. Sheppard SK, Dallas JF, Strachan NJ, et al,. (2009) Campylobacter genotyping to determine the source of human infection. Clinical Infectious Disease, 48, 1072-1078.
51. Sheppard SK, Colles F, Richardson J, et al,. (2010) Host association of Campylobacter genotypes transcends geographic variation. Applied Environmental Microbiology, 76, 5269-5277.
52. Sheppard SK, Colles FM, McCarthy ND, et al,. (2011) Niche segregation and genetic structure of Campylobacter jejuni populations from wild and agricultural host species. Molecular Ecology, 20, 3484-3490.
53. Smyth DS, Feil EJ, Meaney WJ, et al,. (2009) Molecular genetic typing reveals further insights into the diversity of animal-associated Staphylococcus aureus. Journal of Medical Microbiology, 58, 1343-1353.
54. Sproston EL, Ogden ID, MacRae M, et al,. (2010) Multi-locus sequence types of Campylobacter carried by flies and slugs acquired from local ruminant faeces. Journal of Applied Microbiology, 109, 829-838.
55. Stern NJ, Bailey JS, Blankenship LC, Cox NA, McHan F, (1988) Colonization characteristics of Campylobacter jejuni in chick ceca. Avian Disease, 32, 330-334.
56. Stern NJ, Meinersmann RJ, Cox NA, Bailey JS, Blankenship LC, (1990) Influence of host lineage on cecal colonization by Campylobacter jejuni in chickens. Avian Disease, 34, 602-606.
57. Suerbaum S, Lohrengel M, Sonnevend A, Ruberg F, Kist M, (2001) Allelic diversity and recombination in Campylobacter jejuni. Journal of Bacteriology, 183, 2553-2559.
58. Vandamme P, Van Doorn LJ, al Rashid ST, et al,. (1997) Campylobacter hyoilei Alderton et al. 1995 and Campylobacter coli Veron and Chatelain 1973 are subjective synonyms. International Journal of Systematic Bacteriology, 47, 1055-1060.
59. Waldenström J, Broman T, Carlsson I, et al,. (2002) Prevalence of Campylobacter jejuni, Campylobacter lari, and Campylobacter coli in different ecological guilds and taxa of migrating birds. Applied Environmental Microbiology, 68, 5911-5917.
60. Waldenström J, Axelsson-Olsson D, Olsen B, et al,. (2010) Campylobacter jejuni colonization in wild birds: results from an infection experiment. PLoS ONE, 5, e9082.
61. Whelan CD, Monaghan P, Girdwood RW, Fricker CR, (1988) The significance of wild birds (Larus sp.) in the epidemiology of Campylobacter infections in humans. Epidemiology & Infection, 101, 259-267.
62. Woolhouse MEJ, Taylor LH, Haydon DT, (2001) Population biology of multihost pathogens. Science, 292, 1109-1112.