Multilocus sequence typing of a global collection of Pasteurella multocida isolates from cattle and other host species demonstrates niche association

BMC Microbiology

Volumn 11, Issue , 2011, Pages

  Hotchkiss, Emily J ^a   Hodgson, J Christopher ^a   Lainson, F Alex ^a   Zadoks, Ruth N ^a  

^a MOREDUN RESEARCH INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIUM ISOLATE; CATTLE; CLONAL SPECIES; DATA BASE; ECOLOGICAL NICHE; FRANCE; GENETIC VARIABILITY; HEMORRHAGIC SEPTICEMIA; HOST; MULTILOCUS SEQUENCE TYPING; NONHUMAN; PASTEURELLA MULTOCIDA; UNITED KINGDOM; UNITED STATES; ANIMAL; ANIMAL DISEASE; BIRD; CATTLE DISEASE; CLASSIFICATION; CLUSTER ANALYSIS; GENETICS; GENOTYPE; GOAT; HETEROZYGOTE; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR EPIDEMIOLOGY; PASTEURELLOSIS; SWINE;

ANIMALIA; AVES; BOS; BOVIDAE; BOVINAE; OVIS; PASTEURELLA MULTOCIDA; SUS;

ANIMALS; BIRDS; CARRIER STATE; CATTLE; CATTLE DISEASES; CLUSTER ANALYSIS; FRANCE; GENOTYPE; GOATS; GREAT BRITAIN; MOLECULAR EPIDEMIOLOGY; MULTILOCUS SEQUENCE TYPING; PASTEURELLA INFECTIONS; PASTEURELLA MULTOCIDA; SWINE; UNITED STATES;

EID: 80052546059     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-11-115     Document Type: Article

References (42)

1. The genus Pasteurella. H Christensen M Bisgaard, Prokaryotes Springer, Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E, 3 2006 6 1062 1090
2. Pasteurellosis in cattle. GH Frank, Pasteurella and Pasteurellosis London, UK: Academic Press, Adlam C, Rutter JM, 1989 197 222
3. Comparative analyses of Pasteurella multocida strains associated with the ovine respiratory and vaginal tracts. RL Davies B Caffrey PJ Watson, Vet Rec 2003 152 7 10 10.1136/vr.152.1.7 12542266 (Pubitemid 36105214)
4. Pasteurellosis in pigs and the determinants of virulence of toxigenic Pasteurella multocida. N Chanter JM Rutter, Pasteurella and Pasteurellosis London, UK: Academic Press, Adlam C, Rutter JM, 1989 161 195
5. Typing of Pasteurella multocida isolated from pigs with and without porcine dermatitis and nephropathy syndrome. FA Lainson KD Aitchison W Donachie JR Thomson, J Clin Microbiol 2002 40 588 593 10.1128/JCM.40.2.588-593.2002 11825975 (Pubitemid 34130885)
6. Prevalence of Pasteurella multocida and other respiratory pathogens in the nasal tract of Scottish calves. EJ Hotchkiss MP Dagleish K Willoughby IJ McKendrick J Finlayson RN Zadoks, et al. Vet Rec 2010 167 555 560 10.1136/vr.c4827 21257416
7. Haemorrhagic septicaemia. GR Carter MCL De Alwis, Pasteurella and Pasteurellosis London, UK: Academic Press, Adlam C, Rutter JM, 1989 131 160
8. Natural history of infection with Pasteurella multocida in rabbits. RF DiGiacomo LE Garlinghouse Jr GLJ Van Hoosier, J Am Vet Med Assoc 1983 183 1172 1175 6643228
9. Fowl cholera. KR Rhoades RB Rimler, Pasteurella and Pasteurellosis London, UK: Academic Press, Adlam C, Rutter JM, 1989 95 113
10. Why your housecat's trite little bite could cause you quite a fright: a study of domestic felines on the occurrence and antibiotic susceptibility of Pasteurella multocida. A Freshwater, Zoonoses Public Health 2008 55 507 513 10.1111/j.1863-2378.2008.01152.x 18811910
11. Pasteurella multocida infection following cat bites in humans. K Westling S Bygdeman O Engkvist C Jorup-Ronstrom, J Infect 2000 40 97 98 10.1053/jinf.1999.0573 10762122 (Pubitemid 30157784)
12. Outer membrane proteins of Pasteurella multocida. T Hatfaludi K Al-Hasani JD Boyce B Adler, Vet Microbiol 2010 144 1 17 10.1016/j.vetmic.2010.01.027 20197220
13. Population structure and diversity of avian isolates of Pasteurella multocida from Australia. PJ Blackall N Fegan GTI Chew DJ Hampson, Microbiology 1998 144 279 289 10.1099/00221287-144-2-279 9493365 (Pubitemid 28067732)
14. Multilocus sequence typing: molecular typing of bacterial pathogens in an era of rapid DNA sequencing and the internet. BG Spratt, Curr Opin Microbiol 1999 2 312 316 10.1016/S1369-5274(99)80054-X 10383857 (Pubitemid 29260153)
15. Genetic variation among Staphylococcus aureus strains from bovine milk and their relevance to methicillin-resistant isolates from humans. E Hata K Katsuda H Kobayashi I Uchida K Tanaka M Eguchi, J Clin Microbiol 2010 48 2130 2139 10.1128/JCM.01940-09 20392913
16. Extraintestinal pathogenic Escherichia coli O1:K1:H7/NM from human and avian origin: detection of clonal groups B2 ST95 and D ST59 with different host distribution. A Mora C Lopez G Dabhi M Blanco JE Blanco MP Alonso, et al. BMC Microbiol 2009 9 132 10.1186/1471-2180-9-132 19583828
17. Host association of Campylobacter genotypes transcends geographic variation. SK Sheppard F Colles J Richardson AJ Cody R Elson A Lawson, et al. Appl Environ Microbiol 2010 76 5269 5277 10.1128/AEM.00124-10 20525862
18. Development of a multi-locus sequence typing scheme for avian isolates of Pasteurella multocida. S Subaaharan LL Blackall PJ Blackall, Vet Microbiol 2010 141 354 361 10.1016/j.vetmic.2010.01.017 20129742
19. Pasteurella multocida RIRDC MLST Database. http://pubmlst.org/pmultocida- rirdc/
20. Pasteurella multocida Multi-host MLST Database. http://pubmlst.org/ pmultocida-multihost/
21. Diversity of avian Pasteurella multocida strains based on capsular PCR typing and variation of the OmpA and OmpH outer membrane proteins. RL Davies R MacCorquodale B Caffrey, Vet Microbiol 2003 91 169 182 10.1016/S0378-1135(02) 00300-0 12458166 (Pubitemid 35379769)
22. Characterisation of bovine strains of Pasteurella multocida and comparison with isolates of avian, ovine and porcine origin. RL Davies R MacCorquodale S Reilly, Vet Microbiol 2004 99 145 158 10.1016/j.vetmic.2003.11. 013 15019106 (Pubitemid 38281247)
23. Molecular epidemiology of Pasteurella multocida in dairy and beef calves. EJ Hotchkiss JC Hodgson E Schmitt-van de Leemput RN Zadoks, Vet Microbiol
24. Molecular and spatial epidemiology of human campylobacteriosis: source association and genotype-related risk factors. P Mullner T Shadbolt JM Collins-Emerson AC Midwinter SE Spencer J Marshall, et al. Epidemiol Infect 2010 138 1372 1383 10.1017/S0950268809991579 20141645
25. Campylobacter genotypes from food animals, environmental sources and clinical disease in Scotland 2005/6. SK Sheppard JF Dallas M MacRae ND McCarthy EL Sproston FJ Gormley, et al. Int J Food Microbiol 2009 134 96 103 10.1016/j.ijfoodmicro.2009.02.010 19269051
26. Multilocus sequence typing of intercontinental bovine Staphylococcus aureus isolates. EM Smith LE Green GF Medley HE Bird LK Fox YH Schukken, et al. J Clin Microbiol 2005 43 4737 4743 10.1128/JCM.43.9.4737-4743.2005 16145135 (Pubitemid 41298271)
27. Molecular genetic typing reveals further insights into the diversity of animal-associated Staphylococcus aureus. DS Smyth EJ Feil WJ Meaney PJ Hartigan T Tollersrud JR Fitzgerald, et al. J Med Microbiol 2009 58 1343 1353 10.1099/jmm.0.009837-0 19528163
28. Epidemiological Association of Different Campylobacter jejuni Groups with Metabolism-Associated Genetic Markers. AE Zautner S Herrmann J Corso AM Tareen T Alter U Gross, Appl Environ Microbiol 2011 77 2359 2365 10.1128/AEM.02403-10 21278270
29. Molecular correlates of host specialization Staphylococcus aureus. L Herron-Olson JR Fitzgerald JM Musser V Kapur, PLoS One 2007 2 1120 10.1371/journal.pone.0001120 17971880
30. Emergence of methicillin-resistant Staphylococcus aureus (MRSA) in different animal species. C Cuny A Friedrich S Kozytska F Layer U Nubel K Ohlsen, et al. Int J Med Microbiol 2010 300 109 117 10.1016/j.ijmm.2009.11.002 20005777
31. Pasteurella multocida and bovine respiratory disease. SM Dabo JD Taylor AW Confer, Anim Health Res Rev 2007 8 129 150 10.1017/S1466252307001399 18218157
32. Virulence genotype of Pasteurella multocida strains isolated from different hosts with various disease status. C Ewers A Lubke-Becker A Bethe S Kiebling M Filter LH Wieler, Vet Microbiol 2006 114 304 317 10.1016/j.vetmic. 2005.12.012 16427218
33. An outbreak of Pasteurella multocida pneumonia in lambs during a field trial of a vaccine against Pasteurella haemolytica. H Black W Donachie D Duganzich, N Z Vet J 1997 45 58 62 10.1080/00480169.1997.35990 16031950 (Pubitemid 127711982)
34. Host adaptation of bovine Staphylococcus aureus seems associated with bacteriological cure after lactational antimicrobial treatment. BH van den Borne M Nielen SG van MB Melchior TJ Lam RN Zadoks, J Dairy Sci 2010 93 2550 2558 10.3168/jds.2009-2971 20494163
35. Development of PCR assays for species- and type-specific identification of Pasteurella multocida isolates. KM Townsend AJ Frost CW Lee JM Papadimitriou HJ Dawkins, J Clin Microbiol 1998 36 1096 1100 9542944 (Pubitemid 28146304)
36. eBURST: Inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data. EJ Feil BC Li DM Aanensen WP Hanage BG Spratt, J Bacteriol 2004 186 1518 1530 10.1128/JB.186.5.1518-1530.2004 14973027 (Pubitemid 38248742)
37. Displaying the relatedness among isolates of bacterial species - the eBURST approach. BG Spratt WP Hanage B Li DM Aanensen EJ Feil, FEMS Microbiol Lett 2004 241 129 134 10.1016/j.femsle.2004.11.015 15598523 (Pubitemid 39642986)
38. MLST Data Analysis. http://pubmlst.org/analysis/
39. SplitsTree: analyzing and visualizing evolutionary data. DH Huson, Bioinformatics 1998 14 68 73 10.1093/bioinformatics/14.1.68 9520503 (Pubitemid 28397727)
40. LIAN 3.0: detecting linkage disequilibrium in multilocus data. Linkage Analysis. B Haubold RR Hudson, Bioinformatics 2000 16 847 848 10.1093/bioinformatics/16.9.847 11108709
41. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. S Kumar M Nei J Dudley K Tamura, Brief Bioinform 2008 9 299 306 10.1093/bib/bbn017 18417537 (Pubitemid 351890826)
42. Sequence type analysis and recombinational tests (START). KA Jolley EJ Feil MS Chan MC Maiden, Bioinformatics 2001 17 1230 1231 10.1093/bioinformatics/ 17.12.1230 11751234 (Pubitemid 33735352)