Gluconacetobacter maltaceti sp. nov., a novel vinegar producing acetic acid bacterium

Systematic and Applied Microbiology

Volumn 36, Issue 1, 2013, Pages 17-21

  Slapšak, Nina ^a   Cleenwerck, Ilse ^b   De Vos, Paul ^b   Trček, Janja ^a  

^a UNIVERSITY OF MARIBOR   (Slovenia)

^b GHENT UNIVERSITY   (Belgium)

Author keywords

Acetic acid bacteria; Gluconacetobacter maltaceti sp. nov.; Vinegar

Indexed keywords

ACETIC ACID; VINEGAR;

ARTICLE; BIOMASS PRODUCTION; CARBON SOURCE; DNA BASE COMPOSITION; DNA FINGERPRINTING; DNA HYBRIDIZATION; GENE SEQUENCE; GLUCONACETOBACTER; GLUCONACETOBACTER MALTACETI; HOUSEKEEPING GENE; MICROBIAL IDENTIFICATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENETIC TREE; PHYLOGENY; PRIORITY JOURNAL;

ACETIC ACID; AMPLIFIED FRAGMENT LENGTH POLYMORPHISM ANALYSIS; BACTERIAL PROTEINS; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CLUSTER ANALYSIS; DNA, BACTERIAL; DNA, RIBOSOMAL; DNA, RIBOSOMAL SPACER; GLUCONACETOBACTER; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS); GLUCONACETOBACTER; GLUCONACETOBACTER ENTANII; GLUCONACETOBACTER HANSENII;

EID: 84874334105     PISSN: 07232020     EISSN: 16180984     Source Type: Journal    
DOI: 10.1016/j.syapm.2012.11.001     Document Type: Article

References (38)

1. Asai T., Iizuka H., Komagata K. The flagellation and taxonomy of genera Gluconobacter and Acetobacter with reference to the existence of intermediate strains. J. Gen. Appl. Microbiol. 1964, 10:95-126.
2. Boesch C., Trček J., Sievers M., Teuber M. Acetobacter intermedius, sp. nov. Syst. Appl. Microbiol. 1998, 21:220-229.
3. Castro, C., Cleenwerk, I., Trček, J., Zuluaga, R., De Vos, P., Caro, G., Aguirre, R., Putaux, J.L., Gañán, P. Gluconacetobacer medellinensis sp. nov., cellulose- and non-cellulose producing acetic acid bacteria isolated from vinegar. Int. J. Syst. Evol. Microbiol., in press, doi:10.1099/ijs.0.043414-0.
4. Cleenwerck I., De Vos P., De Vuyst L. Phylogeny and differentiation of species of the genus Gluconacetobacter and related taxa based on multilocus sequence analyses of housekeeping genes and reclassification of Acetobacter xylinus subspecies sucrofermentans as Gluconacetobacter sucrofermentans (Toyosaki et al., 1996) sp. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 2010, 60:2277-2283.
5. Cleenwerck I., De Wachter M., González á., De Vuyst L., De Vos P. Differentiation of species of the family Acetobacteraceae by AFLP DNA fingerprinting and reclassification of Gluconacetobacter kombuchae as Gluconacetobacter hansenii. Int. J. Syst. Evol. Microbiol. 2009, 59:1771-1786.
6. Cleenwerck I., Vandemeulebroecke K., Janssens D., Swings J. Re-examination of the genus Acetobacter, with descriptions of Acetobacter cerevisiae sp. nov. and Acetobacter malorum sp. nov. Int. J. Syst. Evol. Microbiol. 2002, 52:1551-1558.
7. AL. Bergey's Manual of Systematic Bacteriology 1984, vol. 1:268-274. Williams and Wilkins, Baltimore.
8. 5-rep-PCR fingerprinting technique for rapid classification and identification of acetic acid bacteria, with a focus on isolates from Ghanaian fermented cocoa beans. Int. J. Food Microbiol. 2008, 125:79-90.
9. Ezaki T., Hashimoto Y., Yabuuchi E. Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int. J. Syst. Evol. Microbiol. 1989, 39:224-229.
10. Felsenstein J. PHYLIP (Phylogeny Inference Package) Version 3.6 2002, Department of Genetics, University of Washington, Seattle, WA, USA.
11. Goris J., Suzuki K., De Vos P., Nakase T., Kersters K. Evaluation of a microplate DNA-DNA hybridization method compared with the initial renaturation method. Can. J. Microbiol. 1998, 44:1148-1153.
12. Gosselé F., Swings J., De Ley J. A rapid, simple and simultaneous detection of 2-keto, 5-keto- and 2,5-diketogluconic acids by thin-layer chromatography in culture media of acetic acid bacteria. Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. 1 Orig. Reihe C1 1980, 178-181.
13. Iino T., Suzuki R., Tanaka N., Kosako Y., Ohkuma M., Komagata K., Uchimura T. Gluconacetobacter kakiaceti sp. nov., a novel acetic acid bacterium isolated from kaki vinegar, Japanese traditional fruit vinegar. Int. J. Syst. Evol. Microbiol. 2012, 62:1465-1469.
14. Kommanee J., Tanasupawat S., Yukphan P., Thongchul N., Moonmangmee D., Yamada Y. Identification of Acetobacter strains isolated in Thailand based on the phenotypic, chemotaxonomic, and molecular characterizations. ScienceAsia 2012, 38:44-53.
15. Lan Huong V.T., Malimas T., Yukphan P., Potacharoen W., Tanasupawat S., Thanh Loan L.T., Tanticharoen M., Yamada Y. Identification of Thai isolates assigned to the genus Gluconobacter based on 16S-23S rDNA ITS restriction analysis. J. Gen. Appl. Microbiol. 2007, 53:133-142.
16. Lisdiyanti P., Navarro R.R., Uchimura T., Komagata K. Reclassification of Gluconacetobacter hansenii strains and proposals of Gluconacetobacter saccharivorans sp. nov. and Gluconacetobacter nataicola sp. nov. Int. J. Syst. Evol. Microbiol. 2006, 56:2101-2111.
17. Malimas T., Yukphan P., Takahashi M., Muramatsu Y., Kaneyasu M., Potacharoen W., Tanasupawat S., Nakagawa Y., Tanticharoen M., Yamada Y. Gluconobacter japonicus sp. nov., an acetic acid bacterium in the Alphaproteobacteria. Int. J. Syst. Evol. Microbiol. 2009, 59:466-471.
18. Mesbah M., Premachandran U., Whitman W.B. Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int. J. Syst. Bacteriol. 1989, 39:159-167.
19. Navarro R.R., Uchimura T., Komagata K. Taxonomic heterogeneity of strains comprising Gluconacetobacter hansenii. J. Gen. Appl. Microbiol. 1999, 45:295-300.
20. Page, R.D.M. (2000) TreeView version 1.6.1. http://taxonomy.zoology.gla.ac.uk/rod/treeview.html.
21. Saeki A., Theeragool G., Matsushita K., Toyama H., Lotong N., Adachi O. Development of thermotolerant acetic acid bacteria useful for vinegar fermentation at higher temperatures. Biosci. Biotechnol. Biochem. 1997, 61:138-145.
22. Schüller G., Hertel C., Hammes W.P. Gluconacetobacter entanii sp. nov., isolated from submerged high-acid industrial vinegar fermentations. Int. J. Syst. Bacteriol. 2000, 50:2013-2020.
23. Sievers M., Sellmer S., Teuber M. Acetobacter europaeus sp. nov., a main component of industrial vinegar fermenters in central Europe. Syst. Appl. Microbiol. 1992, 15:386-392.
24. Sokollek S.J., Hammes W.P. Description of a starter culture preparation for vinegar fermentations. Syst. Appl. Microbiol. 1997, 20:481-491.
25. Sokollek S.J., Hertel C., Hammes W.P. Description of Acetobacter oboediens sp. nov. and Acetobacter pomorum sp. nov., two new species isolated from industrial vinegar fermentations. Int. J. Syst. Bacteriol. 1998, 48:935-940.
26. Stackebrandt E., Frederiksen W., Garrity G.M., Grimont P.A.D., Kämpfer P., Maiden M.C.J., Nesme X., Rosselló-Mora R., Swings J., et al. Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. Int. J. Syst. Evol. Microbiol. 2002, 52:1043-1047.
27. Swings J. The genera Acetobacter and Gluconobacter. The Prokaryotes. A handbook on the Biology of Bacteria: Ecophysiology, Isolation, Identification, Applications 1992, vol. III:2268-2286. Springer-Verlag, New York.
28. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The ClustalX interface: flexible strategies for multiple sequence alignment aided by quality analysis tool. Nucleic Acids Res. 1997, 25:4876-4882.
29. Trček J. Genotypic characteristics of Gluconacetobacter hansenii LMG 1582 suggest its reclassification to a new species. Research Reports BF UL, Agriculture 2002, 79(1):19-26.
30. Trček J. Quick identification of acetic acid bacteria based on nucleotide sequences of the 16S-23S rDNA internal transcribed spacer region and of the PQQ-dependent alcohol dehydrogenase gene. Syst. Appl. Microbiol. 2005, 28:735-745.
31. Trček J., Jernejc K., Matsushita M. The highly tolerant acetic acid bacterium Gluconacetonacter europaeus adapts to the presence of acetic acid by changes in lipid composition, morphological properties and PQQ-dependent ADH expression. Extremophiles 2007, 11:627-635.
32. Trček J., RamuŠ J., Raspor P. Phenotypic characterization and RAPD-PCR profiling of Acetobacter sp. isolated from spirit vinegar production. Food Technol. Biotechnol. 1997, 35:63-67.
33. Trček J., Raspor P., Teuber M. Molecular identification of Acetobacter isolates from submerged vinegar production, sequence analysis of plasmid pJK2-1 and application in development of a cloning vector. Appl. Microbiol. Biotechnol. 2000, 53:289-295.
34. Trček J., Teuber M. Genetic and restriction analysis of the 16S-23S rDNA internal transcribed spacer regions of the acetic acid bacteria. FEMS Microbiol. Lett. 2002, 208:69-75.
35. Wayne L.G., Brenner D.J., Colwell R.R., Grimont P.A.D., Kandler O., Krichevsky M.I., Moore L.H., Moore W.E.C., Murray R.G.E., et al. International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 1987, 37:463-464.
36. Wilson K. Preparation of genomic DNA from bacteria. Current Protocols in Molecular Biology 1987, 2.4.1-2.4.5. Green Publishing and Wiley-Interscience, New York. F.M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, K. Struhl (Eds.).
37. Yukphan P., Malimas T., Potacharoen W., Tanasupawat S., Tanticharoen M., Yamada Y. Identification of strains assigned to the genus Asaia Yamada et al., 2000 based on restriction analysis of 16S-23S rDNA internal transcribed spacer regions. J. Gen. Appl. Microbiol. 2006, 52:55-62.
38. Yukphan P., Malimas T., Takahashi M., Potacharoen W., Busabun T., Tanasupawat S., Nakagawa Y., Tanticharoen M., Yamada Y. Re-identification of Gluconobacter strains based on restriction analysis of 16S-23S rDNA internal transcribed spacer region. J. Gen. Appl. Microbiol. 2004, 50:189-195.