-
1
-
-
84857411787
-
Y-family DNA polymerases and their role in tolerance of cellular DNA damage
-
Sale,J.E., Lehmann,A.R. and Woodgate,R. (2012) Y-family DNA polymerases and their role in tolerance of cellular DNA damage. Nat. Rev. Mol. Cell Biol., 13, 141-152.
-
(2012)
Nat. Rev. Mol. Cell Biol
, vol.13
, pp. 141-152
-
-
Sale, J.E.1
Lehmann, A.R.2
Woodgate, R.3
-
2
-
-
19444383801
-
Trading places: How do DNA polymerases switch during translesion DNA synthesis?
-
Friedberg,E.C., Lehmann,A.R. and Fuchs,R.P. (2005) Trading places: How do DNA polymerases switch during translesion DNA synthesis? Mol. Cell, 18, 499-505.
-
(2005)
Mol. Cell
, vol.18
, pp. 499-505
-
-
Friedberg, E.C.1
Lehmann, A.R.2
Fuchs, R.P.3
-
3
-
-
21244506437
-
Eukaryotic translesion synthesis DNA polymerases: Specificity of structure and function
-
Prakash,S., Johnson,R.E. and Prakash,L. (2005) Eukaryotic translesion synthesis DNA polymerases: Specificity of structure and function. Annu. Rev. Biochem., 74, 317-353.
-
(2005)
Annu. Rev. Biochem
, vol.74
, pp. 317-353
-
-
Prakash, S.1
Johnson, R.E.2
Prakash, L.3
-
4
-
-
77953166792
-
Multiple two-polymerase mechanisms in mammalian translesion DNA synthesis
-
Livneh,Z., Ziv,O. and Shachar,S. (2010) Multiple two-polymerase mechanisms in mammalian translesion DNA synthesis. Cell Cycle, 9, 729-735.
-
(2010)
Cell Cycle
, vol.9
, pp. 729-735
-
-
Livneh, Z.1
Ziv, O.2
Shachar, S.3
-
5
-
-
0036682979
-
Translesion DNA synthesis in eukaryotes: A one- or two-polymerase affair
-
Prakash,S. and Prakash,L. (2002) Translesion DNA synthesis in eukaryotes: A one- or two-polymerase affair. Genes Dev., 16, 1872-1883.
-
(2002)
Genes Dev
, vol.16
, pp. 1872-1883
-
-
Prakash, S.1
Prakash, L.2
-
6
-
-
0034738983
-
Eukaryotic polymerases iota and zeta act sequentially to bypass DNA lesions
-
Johnson,R.E., Washington,M.T., Haracska,L., Prakash,S. and Prakash,L. (2000) Eukaryotic polymerases iota and zeta act sequentially to bypass DNA lesions. Nature, 406, 1015-1019.
-
(2000)
Nature
, vol.406
, pp. 1015-1019
-
-
Johnson, R.E.1
Washington, M.T.2
Haracska, L.3
Prakash, S.4
Prakash, L.5
-
7
-
-
0345732688
-
Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis
-
Guo,C., Fischhaber,P.L., Luk-Paszyc,M.J., Masuda,Y., Zhou,J., Kamiya,K., Kisker,C. and Friedberg,E.C. (2003) Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis. EMBO J., 22, 6621-6630.
-
(2003)
EMBO J.
, vol.22
, pp. 6621-6630
-
-
Guo, C.1
Fischhaber, P.L.2
Luk-Paszyc, M.J.3
Masuda, Y.4
Zhou, J.5
Kamiya, K.6
Kisker, C.7
Friedberg, E.C.8
-
8
-
-
3042812439
-
Interaction of hREV1 with three human Y-family DNA polymerases
-
Ohashi,E., Murakumo,Y., Kanjo,N., Akagi,J., Masutani,C., Hanaoka,F. and Ohmori,H. (2004) Interaction of hREV1 with three human Y-family DNA polymerases. Genes Cells, 9, 523-531.
-
(2004)
Genes Cells
, vol.9
, pp. 523-531
-
-
Ohashi, E.1
Murakumo, Y.2
Kanjo, N.3
Akagi, J.4
Masutani, C.5
Hanaoka, F.6
Ohmori, H.7
-
9
-
-
4544251295
-
Co-localization in replication foci and interaction of human Y-family members, DNA polymerase pol eta and REVl protein
-
Tissier,A., Kannouche,P., Reck,M.P., Lehmann,A.R., Fuchs,R.P. and Cordonnier,A. (2004) Co-localization in replication foci and interaction of human Y-family members, DNA polymerase pol eta and REVl protein. DNA Repair, 3, 1503-1514.
-
(2004)
DNA Repair
, vol.3
, pp. 1503-1514
-
-
Tissier, A.1
Kannouche, P.2
Reck, M.P.3
Lehmann, A.R.4
Fuchs, R.P.5
Cordonnier, A.6
-
10
-
-
0035929659
-
Interactions in the error-prone postreplication repair proteins hREV1, hREV3, and hREV7
-
Murakumo,Y., Ogura,Y., Ishii,H., Numata,S., Ichihara,M., Croce,C.M., Fishel,R. and Takahashi,M. (2001) Interactions in the error-prone postreplication repair proteins hREV1, hREV3, and hREV7. J. Biol. Chem., 276, 35644-35651.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 35644-35651
-
-
Murakumo, Y.1
Ogura, Y.2
Ishii, H.3
Numata, S.4
Ichihara, M.5
Croce, C.M.6
Fishel, R.7
Takahashi, M.8
-
11
-
-
79959906411
-
Sequential assembly of translesion DNA polymerases at UV-induced DNA damage sites
-
Andersen,P.L., Xu,F., Ziola,B., McGregor,W.G. and Xiao,W. (2011) Sequential assembly of translesion DNA polymerases at UV-induced DNA damage sites. Mol. Biol. Cell, 22, 2373-2383.
-
(2011)
Mol. Biol. Cell
, vol.22
, pp. 2373-2383
-
-
Andersen, P.L.1
Xu, F.2
Ziola, B.3
McGregor, W.G.4
Xiao, W.5
-
12
-
-
0034733598
-
DNA damage-induced mutation: Tolerance via translesion synthesis
-
Kunz,B.A., Straffon,A.F. and Vonarx,E.J. (2000) DNA damage-induced mutation: Tolerance via translesion synthesis. Mutat. Res., 451, 169-185.
-
(2000)
Mutat. Res
, vol.451
, pp. 169-185
-
-
Kunz, B.A.1
Straffon, A.F.2
Vonarx, E.J.3
-
13
-
-
70450278944
-
Mammalian polymerase zeta is essential for post-replication repair of UV-induced DNA lesions
-
Jansen,J.G., Tsaalbi-Shtylik,A., Hendriks,G., Verspuy,J., Gali,H., Haracska,L. and de Wind,N. (2009) Mammalian polymerase zeta is essential for post-replication repair of UV-induced DNA lesions. DNA Repair, 8, 1444-1451.
-
(2009)
DNA Repair
, vol.8
, pp. 1444-1451
-
-
Jansen, J.G.1
Tsaalbi-Shtylik, A.2
Hendriks, G.3
Verspuy, J.4
Gali, H.5
Haracska, L.6
De Wind, N.7
-
14
-
-
21744447035
-
Multiple roles of vertebrate REV genes in DNA repair and recombination
-
Okada,T., Sonoda,E., Yoshimura,M., Kawano,Y., Saya,H., Kohzaki,M. and Takeda,S. (2005) Multiple roles of vertebrate REV genes in DNA repair and recombination. Mol. Cell. Biol., 25, 6103-6111.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 6103-6111
-
-
Okada, T.1
Sonoda, E.2
Yoshimura, M.3
Kawano, Y.4
Saya, H.5
Kohzaki, M.6
Takeda, S.7
-
15
-
-
84866745325
-
Spartan/ C1orf124 is important to prevent UV-induced mutagenesis
-
Machida,Y., Kim,M.S. and Machida,Y.J. (2012) Spartan/ C1orf124 is important to prevent UV-induced mutagenesis. Cell Cycle, 11, 3395-3402.
-
(2012)
Cell Cycle
, vol.11
, pp. 3395-3402
-
-
Machida, Y.1
Kim, M.S.2
Machida, Y.J.3
-
16
-
-
84861986798
-
Spartan/ C1orf124, a reader of PCNA ubiquitylation and a regulator of UV-induced DNA damage response
-
Centore,R.C., Yazinski,S.A., Tse,A. and Zou,L. (2012) Spartan/ C1orf124, a reader of PCNA ubiquitylation and a regulator of UV-induced DNA damage response. Mol. Cell, 46, 625-635.
-
(2012)
Mol. Cell
, vol.46
, pp. 625-635
-
-
Centore, R.C.1
Yazinski, S.A.2
Tse, A.3
Zou, L.4
-
17
-
-
84867278911
-
PCNA-binding protein C1orf124 is a regulator of translesion synthesis
-
Ghosal,G., Leung,J.W., Nair,B.C., Fong,K.W. and Chen,J. (2012) PCNA-binding protein C1orf124 is a regulator of translesion synthesis. J. Biol. Chem., 287, 34225-34233.
-
(2012)
J. Biol. Chem
, vol.287
, pp. 34225-34233
-
-
Ghosal, G.1
Leung, J.W.2
Nair, B.C.3
Fong, K.W.4
Chen, J.5
-
18
-
-
84870612586
-
Characterization of human Spartan/C1orf124, an ubiquitin-PCNA interacting regulator of DNA damage tolerance
-
Juhasz,S., Balogh,D., Hajdu,I., Burkovics,P., Villamil,M.A., Zhuang,Z. and Haracska,L. (2012) Characterization of human Spartan/C1orf124, an ubiquitin-PCNA interacting regulator of DNA damage tolerance. Nucleic Acids Res., 40, 10795-10808.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 10795-10808
-
-
Juhasz, S.1
Balogh, D.2
Hajdu, I.3
Burkovics, P.4
Villamil, M.A.5
Zhuang, Z.6
Haracska, L.7
-
19
-
-
84869086918
-
DVC1 (C1orf124) is a DNA damage-targeting p97 adaptor that promotes ubiquitin-dependent responses to replication blocks
-
Mosbech,A., Gibbs-Seymour,I., Kagias,K., Thorslund,T., Beli,P., Povlsen,L., Nielsen,S.V., Smedegaard,S., Sedgwick,G., Lukas,C. et al. (2012) DVC1 (C1orf124) is a DNA damage-targeting p97 adaptor that promotes ubiquitin-dependent responses to replication blocks. Nat. Struct. Mol. Biol., 19, 1084-1092.
-
(2012)
Nat. Struct. Mol. Biol
, vol.19
, pp. 1084-1092
-
-
Mosbech, A.1
Gibbs-Seymour, I.2
Kagias, K.3
Thorslund, T.4
Beli, P.5
Povlsen, L.6
Nielsen, S.V.7
Smedegaard, S.8
Sedgwick, G.9
Lukas, C.10
-
20
-
-
84869093163
-
DVC1 (C1orf124) recruits the p97 protein segregase to sites of DNA damage
-
Davis,E.J., Lachaud,C., Appleton,P., Macartney,T.J., Nathke,I. and Rouse,J. (2012) DVC1 (C1orf124) recruits the p97 protein segregase to sites of DNA damage. Nat. Struct. Mol. Biol., 11, 1093-1100.
-
(2012)
Nat. Struct. Mol. Biol
, vol.11
, pp. 1093-1100
-
-
Davis, E.J.1
Lachaud, C.2
Appleton, P.3
MacArtney, T.J.4
Nathke, I.5
Rouse, J.6
-
21
-
-
0037040170
-
Reconstitution of human DNA polymerase delta using recombinant baculoviruses: The p12 subunit potentiates DNA polymerizing activity of the four-subunit enzyme
-
Podust,V.N., Chang,L.S., Ott,R., Dianov,G.L. and Fanning,E. (2002) Reconstitution of human DNA polymerase delta using recombinant baculoviruses: The p12 subunit potentiates DNA polymerizing activity of the four-subunit enzyme. J. Biol. Chem., 277, 3894-3901.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 3894-3901
-
-
Podust, V.N.1
Chang, L.S.2
Ott, R.3
Dianov, G.L.4
Fanning, E.5
-
22
-
-
0028351180
-
Proximal and distal effects of sequence context on ultraviolet mutational hotspots in a shuttle vector replicated in xeroderma cells
-
Parris,C.N., Levy,D.D., Jessee,J. and Seidman,M.M. (1994) Proximal and distal effects of sequence context on ultraviolet mutational hotspots in a shuttle vector replicated in xeroderma cells. J. Mol. Biol., 236, 491-502.
-
(1994)
J. Mol. Biol
, vol.236
, pp. 491-502
-
-
Parris, C.N.1
Levy, D.D.2
Jessee, J.3
Seidman, M.M.4
-
23
-
-
71749110779
-
The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1
-
Machida,Y.J., Machida,Y., Vashisht,A.A., Wohlschlegel,J.A. and Dutta,A. (2009) The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1. J. Biol. Chem., 284, 34179-34188.
-
(2009)
J. Biol. Chem
, vol.284
, pp. 34179-34188
-
-
Machida, Y.J.1
Machida, Y.2
Vashisht, A.A.3
Wohlschlegel, J.A.4
Dutta, A.5
-
24
-
-
10344222619
-
Three-dimensional model of a substrate-bound SARS chymotrypsin-like cysteine proteinase predicted by multiple molecular dynamics simulations: Catalytic efficiency regulated by substrate binding
-
Pang,Y.-P. (2004) Three-dimensional model of a substrate-bound SARS chymotrypsin-like cysteine proteinase predicted by multiple molecular dynamics simulations: Catalytic efficiency regulated by substrate binding. Proteins, 57, 747-757.
-
(2004)
Proteins
, vol.57
, pp. 747-757
-
-
Pang, Y.-P.1
-
25
-
-
84859753178
-
Bak conformational changes induced by ligand binding: Insight into BH3 domain binding and Bak homo-oligomerization
-
Pang,Y.-P., Dai,H., Smith,A., Meng,X.W., Schneider,P.A. and Kaufmann,S.H. (2012) Bak conformational changes induced by ligand binding: Insight into BH3 domain binding and Bak homo-oligomerization. Sci. Rep., 2, 257.
-
(2012)
Sci. Rep
, vol.2
, pp. 257
-
-
Pang, Y.-P.1
Dai, H.2
Smith, A.3
Meng, X.W.4
Schneider, P.A.5
Kaufmann, S.H.6
-
26
-
-
0024559146
-
A unique signature identifies a family of zinc-dependent metallopeptidases
-
Jongeneel,C.V., Bouvier,J. and Bairoch,A. (1989) A unique signature identifies a family of zinc-dependent metallopeptidases. FEBS Lett., 242, 211-214.
-
(1989)
FEBS Lett
, vol.242
, pp. 211-214
-
-
Jongeneel, C.V.1
Bouvier, J.2
Bairoch, A.3
-
27
-
-
0029036451
-
Evolutionary families of metallopeptidases
-
Rawlings,N.D. and Barrett,A.J. (1995) Evolutionary families of metallopeptidases. Methods Enzymol., 248, 183-228.
-
(1995)
Methods Enzymol
, vol.248
, pp. 183-228
-
-
Rawlings, N.D.1
Barrett, A.J.2
-
28
-
-
63849246525
-
Protein structure prediction on the Web: A case study using the Phyre server
-
Kelley,L.A. and Sternberg,M.J. (2009) Protein structure prediction on the Web: A case study using the Phyre server. Nat. Protoc., 4, 363-371.
-
(2009)
Nat. Protoc
, vol.4
, pp. 363-371
-
-
Kelley, L.A.1
Sternberg, M.J.2
-
29
-
-
24344470084
-
Structural analysis of botulinum neurotoxin serotype F light chain: Implications on substrate binding and inhibitor design
-
Agarwal,R., Binz,T. and Swaminathan,S. (2005) Structural analysis of botulinum neurotoxin serotype F light chain: Implications on substrate binding and inhibitor design. Biochemistry, 44, 11758-11765.
-
(2005)
Biochemistry
, vol.44
, pp. 11758-11765
-
-
Agarwal, R.1
Binz, T.2
Swaminathan, S.3
-
30
-
-
0035829518
-
Crystal structure of the anthrax lethal factor
-
Pannifer,A.D., Wong,T.Y., Schwarzenbacher,R., Renatus,M., Petosa,C., Bienkowska,J., Lacy,D.B., Collier,R.J., Park,S., Leppla,S.H. et al. (2001) Crystal structure of the anthrax lethal factor. Nature, 414, 229-233.
-
(2001)
Nature
, vol.414
, pp. 229-233
-
-
Pannifer, A.D.1
Wong, T.Y.2
Schwarzenbacher, R.3
Renatus, M.4
Petosa, C.5
Bienkowska, J.6
Lacy, D.B.7
Collier, R.J.8
Park, S.9
Leppla, S.H.10
-
31
-
-
33845510324
-
Snapshots of the reaction mechanism of matrix metalloproteinases
-
Bertini,I., Calderone,V., Fragai,M., Luchinat,C., Maletta,M. and Yeo,K.J. (2006) Snapshots of the reaction mechanism of matrix metalloproteinases. Angew. Chem. Int. Ed. Engl., 45, 7952-7955.
-
(2006)
Angew. Chem. Int. Ed. Engl
, vol.45
, pp. 7952-7955
-
-
Bertini, I.1
Calderone, V.2
Fragai, M.3
Luchinat, C.4
Maletta, M.5
Yeo, K.J.6
-
32
-
-
0036242094
-
Pol32, a subunit of Saccharomyces cerevisiae DNA polymerase delta, suppresses genomic deletions and is involved in the mutagenic bypass pathway
-
Huang,M.E., Rio,A.G., Galibert,M.D. and Galibert,F. (2002) Pol32, a subunit of Saccharomyces cerevisiae DNA polymerase delta, suppresses genomic deletions and is involved in the mutagenic bypass pathway. Genetics, 160, 1409-1422.
-
(2002)
Genetics
, vol.160
, pp. 1409-1422
-
-
Huang, M.E.1
Rio, A.G.2
Galibert, M.D.3
Galibert, F.4
-
33
-
-
67649886521
-
Yeast Rev1 protein promotes complex formation of DNA polymerase zeta with Pol32 subunit of DNA polymerase delta
-
Acharya,N., Johnson,R.E., Pages,V., Prakash,L. and Prakash,S. (2009) Yeast Rev1 protein promotes complex formation of DNA polymerase zeta with Pol32 subunit of DNA polymerase delta. Proc. Natl Acad. Sci. USA, 106, 9631-9636.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 9631-9636
-
-
Acharya, N.1
Johnson, R.E.2
Pages, V.3
Prakash, L.4
Prakash, S.5
-
34
-
-
84861216764
-
DNA polymerase delta and zeta switch by sharing accessory subunits of DNA polymerase delta
-
Baranovskiy,A.G., Lada,A.G., Siebler,H.M., Zhang,Y., Pavlov,Y.I. and Tahirov,T.H. (2012) DNA polymerase delta and zeta switch by sharing accessory subunits of DNA polymerase delta. J. Biol. Chem., 287, 17281-17287.
-
(2012)
J. Biol. Chem
, vol.287
, pp. 17281-17287
-
-
Baranovskiy, A.G.1
Lada, A.G.2
Siebler, H.M.3
Zhang, Y.4
Pavlov, Y.I.5
Tahirov, T.H.6
-
35
-
-
84864512844
-
Pol31 and Pol32 subunits of yeast DNA polymerase delta are also essential subunits of DNA polymerase zeta
-
Johnson,R.E., Prakash,L. and Prakash,S. (2012) Pol31 and Pol32 subunits of yeast DNA polymerase delta are also essential subunits of DNA polymerase zeta. Proc. Natl Acad. Sci. USA, 109, 12455-12460.
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 12455-12460
-
-
Johnson, R.E.1
Prakash, L.2
Prakash, S.3
|