Short-Read Assembly of Full-Length 16S Amplicons Reveals Bacterial Diversity in Subsurface Sediments

PLoS ONE

Volumn 8, Issue 2, 2013, Pages

  Miller, Christopher S ^a,b   Handley, Kim M ^a,c,d   Wrighton, Kelly C ^a   Frischkorn, Kyle R ^a   Thomas, Brian C ^a   Banfield, Jillian F ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF COLORADO   (United States)

^c UNIVERSITY OF CHICAGO   (United States)

^d ARGONNE NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACETIC ACID; IRON; RNA 16S; SULFATE;

16S RNA GENE; AMPLICON; ARTICLE; BACTERIAL GENETICS; BACTERIAL METABOLISM; BACTERIUM IDENTIFICATION; COMMUNITY STRUCTURE; CONTROLLED STUDY; DNA EXTRACTION; GENETIC ALGORITHM; GENETIC PARAMETERS; GENETIC VARIABILITY; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; POPULATION ABUNDANCE; RNA GENE; RNA REPLICATION; RNA SEQUENCE; RNA SHORT READ ASSEMBLY; SEDIMENT;

BACTERIA; BIODIVERSITY; DNA, BACTERIAL; GENETIC VARIATION; GEOLOGIC SEDIMENTS; GROUNDWATER; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

EID: 84873564282     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0056018     Document Type: Article

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