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Volumn 6, Issue 7, 2012, Pages 1273-1276

Comparison of Illumina paired-end and single-direction sequencing for microbial 16S rRNA gene amplicon surveys

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84862620989     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2011.186     Document Type: Note
Times cited : (95)

References (13)
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    • Generation of multimillionsequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end Illumina reads
    • Bartram AK, Lynch MDJ, Stearns JC, Moreno-Hagelsieb G, Neufeld JD. (2011). Generation of multimillionsequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end Illumina reads. Appl Environ Microbiol 77: 3846-3852.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 3846-3852
    • Bartram, A.K.1    Lynch, M.D.J.2    Stearns, J.C.3    Moreno-Hagelsieb, G.4    Neufeld, J.D.5
  • 5
  • 7
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than blast
    • Edgar RC. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461.
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 9
    • 29144464937 scopus 로고    scopus 로고
    • UniFrac: A new phylogenetic method for comparing microbial communities
    • DOI 10.1128/AEM.71.12.8228-8235.2005
    • Lozupone C, Knight R. (2005). UniFrac: A new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71: 8228-8235. (Pubitemid 41803949)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.12 , pp. 8228-8235
    • Lozupone, C.1    Knight, R.2
  • 10
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2-Approximately maximum-likelihood trees for large alignments
    • Price MN, Dehal PS, Arkin AP. (2010). FastTree 2-Approximately maximum-likelihood trees for large alignments. Plos One 5: E9490.
    • (2010) Plos One , vol.5
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 12
    • 84355166737 scopus 로고    scopus 로고
    • Impact of training sets on classification of high-Throughput bacterial 16S rRNA gene surveys
    • e-pub ahead of print 30 June 2011; doi:10.1038/ismej.2011.82
    • Werner JJ, Koren O, Hugenholtz P, DeSantis TZ, Walters WA, Caporaso JG et al. (2011b). Impact of training sets on classification of high-Throughput bacterial 16S rRNA gene surveys. ISME J; e-pub ahead of print 30 June 2011; doi:10.1038/ismej.2011.82.
    • (2011) Isme J.
    • Werner, J.J.1    Koren, O.2    Hugenholtz, P.3    DeSantis, T.Z.4    Walters, W.A.5    Caporaso, J.G.6
  • 13
    • 79953026036 scopus 로고    scopus 로고
    • Bipes, a cost-effective high-Throughput method for assessing microbial diversity
    • ZhouH W, Li DF, TamNFY, Jiang XT, Zhang H, Sheng HF et al. (2011). BIPES, a cost-effective high-Throughput method for assessing microbial diversity. ISME J 5: 741-749.
    • (2011) ISME J. , vol.5 , pp. 741-749
    • ZhouH, W.1    Li, D.F.2    Tam, N.F.Y.3    Jiang, X.T.4    Zhang, H.5    Sheng, H.F.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.