Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phyla

Science

Volumn 337, Issue 6102, 2012, Pages 1661-1665

  Wrighton, Kelly C ^a   Thomas, Brian C ^a   Sharon, Itai ^a   Miller, Christopher S ^a   Castelle, Cindy J ^b   VerBerkmoes, Nathan C ^c   Wilkins, Michael J ^d   Hettich, Robert L ^c   Lipton, Mary S ^d   Williams, Kenneth H ^b   Long, Philip E ^b   Banfield, Jillian F ^a,b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^c OAK RIDGE NATIONAL LABORATORY   (United States)

^d PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACETYL COENZYME A; CARBON DIOXIDE; GROUND WATER; HYDROGEN; NICOTINAMIDE ADENINE DINUCLEOTIDE; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; RIBULOSEBISPHOSPHATE CARBOXYLASE; RNA; SULFUR;

AMINO ACID; ANOXIC CONDITIONS; AQUIFER; BACTERIUM; CARBON DIOXIDE; CARBON FIXATION; ENZYME ACTIVITY; FERMENTATION; GAS PRODUCTION; GENOMICS; HYDROGEN; METABOLISM; MICROBIAL ACTIVITY; SEDIMENT CHEMISTRY; SULFUR; SULFUR CYCLE;

ARTICLE; BACTERIAL METABOLISM; CLADISTICS; CODON; DNA SEQUENCE; FERMENTATION; GENOMICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLUM; PRIORITY JOURNAL;

ARCHAEA; BACTERIA (MICROORGANISMS);

EID: 84866772472     PISSN: 00368075     EISSN: 10959203     Source Type: Journal    
DOI: 10.1126/science.1224041     Document Type: Article

References (29)

1. M. Hess et al., Science 331, 463 (2011).
2. D. Wu et al., PLoS ONE 6, e18011 (2011).
3. G. W. Tyson et al., Nature 428, 37 (2004).
4. V. Iverson et al., Science 335, 587 (2012).
5. P. G. Falkowski, T. Fenchel, E. F. Delong, Science 320, 1034 (2008).
6. M. S. Rappé, S. J. Giovannoni, Annu. Rev. Microbiol. 57, 369 (2003).
7. Materials and methods are available as supplementary materials on Science Online.
8. C. S. Miller, B. J. Baker, B. C. Thomas, S. W. Singer, J. F. Banfield, Genome Biol. 12, R44 (2011).
9. G. J. Dick et al., Genome Biol. 10, R85 (2009).
10. J. Raes, J. O. Korbel, M. J. Lercher, C. von Mering, P. Bork, Genome Biol. 8, R10 (2007).
11. M. S. Elshahed et al., Appl. Environ. Microbiol. 71, 7598 (2005).
12. N. H. Youssef, P. C. Blainey, S. R. Quake, M. S. Elshahed, Appl. Environ. Microbiol. 77, 7804 (2011).
13. J. P. McCutcheon, B. R. McDonald, N. A. Moran, PLoS Genet. 5, e1000565 (2009).
14. X. Mai, M. W. Adams, J. Bacteriol. 178, 5897 (1996).
15. R. T. Anderson et al., Appl. Environ. Microbiol. 69, 5884 (2003).
16. L. Schöcke, B. Schink, Eur. J. Biochem. 256, 589 (1998).
17. P. M. Vignais, B. Billoud, Chem. Rev. 107, 4206 (2007).
18. K. Ma, R. N. Schicho, R. M. Kelly, M. W. Adams, Proc. Natl. Acad. Sci. U.S.A. 90, 5341 (1993).
19. D. J. van Haaster, P. J. Silva, P. L. Hagedoorn, J. A. Jongejan, W. R. Hagen, J. Bacteriol. 190, 1584 (2008).
20. R. Sapra, K. Bagramyan, M. W. W. Adams, Proc. Natl. Acad. Sci. U.S.A. 100, 7545 (2003).
21. P. J. Silva et al., Eur. J. Biochem. 267, 6541 (2000).
22. T. Kanai et al., J. Bacteriol. 193, 3109 (2011).
23. F. R. Tabita, T. E. Hanson, S. Satagopan, B. H. Witte, N. E. Kreel, Philos. Trans. R. Soc. B 363, 2629 (2008).
24. T. Sato, H. Atomi, T. Imanaka, Science 315, 1003 (2007).
25. C. Briée, D. Moreira, P. López-García, Res. Microbiol. 158, 213 (2007).
26. S. Peura et al., ISME J. 6, 1640 (2012).
27. P. Hugenholtz, C. Pitulle, K. L. Hershberger, N. R. Pace, J. Bacteriol. 180, 366 (1998).
28. J. K. Harris, S. T. Kelley, N. R. Pace, Appl. Environ. Microbiol. 70, 845 (2004).
29. I. Pagani et al Nucleic Acids Res. 40 (Database issue), D571 (2012).