Reproducibility and quantitation of amplicon sequencing-based detection

ISME Journal

Volumn 5, Issue 8, 2011, Pages 1303-1313

  Zhou, Jizhong ^a,b,c   Wu, Liyou ^b   Deng, Ye ^b   Zhi, Xiaoyang ^b   Jiang, Yi Huei ^b   Tu, Qichao ^b   Xie, Jianping ^b   Van Nostrand, Joy D ^b   He, Zhili ^b   Yang, Yunfeng ^a  

^a TSINGHUA UNIVERSITY   (China)

^b UNIVERSITY OF OKLAHOMA   (United States)

^c LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

amplicon sequencing; metagenomics; pyrosequencing; quantitation; random sampling; reproducibility

Indexed keywords

BACTERIAL DNA; RNA 16S;

DATA SET; DETECTION METHOD; ESTIMATION METHOD; EXPERIMENTAL STUDY; GENETIC ANALYSIS; GENOMICS; GLOBAL CHANGE; MICROBIAL COMMUNITY; OBSERVATIONAL METHOD; QUANTITATIVE ANALYSIS; SAMPLING; SPECIES DIVERSITY; TAXONOMY;

ARTICLE; CLIMATE CHANGE; DNA SEQUENCE; EVALUATION; GENETICS; ISOLATION AND PURIFICATION; METAGENOMICS; METHODOLOGY; MICROBIOLOGY; SHEWANELLA; UNITED STATES;

CLIMATE CHANGE; DNA, BACTERIAL; METAGENOMICS; OKLAHOMA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SHEWANELLA; SOIL MICROBIOLOGY;

OTUS; SHEWANELLA ONEIDENSIS; SHEWANELLA ONEIDENSIS MR-1;

EID: 79960557827     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2011.11     Document Type: Article

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