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Volumn 126, Issue 2, 2013, Pages 435-441

Effect of inter- and intragenic epistasis on the heritability of oil content in rapeseed (Brassica napus L.)

Author keywords

[No Author keywords available]

Indexed keywords

GENES; KNOWLEDGE BASED SYSTEMS;

EID: 84873082587     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-012-1991-7     Document Type: Article
Times cited : (32)

References (47)
  • 2
    • 77952109327 scopus 로고    scopus 로고
    • Physiological and developmental regulation of seed oil production
    • Baud S, Lepiniec L (2010) Physiological and developmental regulation of seed oil production. Prog Lipid Res 49: 235-249.
    • (2010) Prog Lipid Res , vol.49 , pp. 235-249
    • Baud, S.1    Lepiniec, L.2
  • 3
    • 71649083748 scopus 로고    scopus 로고
    • Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthesis genes in Arabidopsis
    • Baud S, Wuillème S, To A, Rochat C, Lepiniec L (2009) Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthesis genes in Arabidopsis. Plant J 60: 933-947.
    • (2009) Plant J , vol.60 , pp. 933-947
    • Baud, S.1    Wuillème, S.2    To, A.3    Rochat, C.4    Lepiniec, L.5
  • 4
    • 0038649534 scopus 로고
    • Estimation of coefficient of coancestry using molecular markers in maize
    • Bernardo R (1993) Estimation of coefficient of coancestry using molecular markers in maize. Theor Appl Genet 85: 1055-1062.
    • (1993) Theor Appl Genet , vol.85 , pp. 1055-1062
    • Bernardo, R.1
  • 6
    • 34248172415 scopus 로고    scopus 로고
    • Engineering oilseeds for sustainable production of industrial and nutritional feedstocks: solving bottlenecks in fatty acid flux
    • Cahoon EB, Shockey JM, Dietrich CR, Gidda SK, Mullen RT et al (2007) Engineering oilseeds for sustainable production of industrial and nutritional feedstocks: solving bottlenecks in fatty acid flux. Curr Opin Plant Biol 10: 236-244.
    • (2007) Curr Opin Plant Biol , vol.10 , pp. 236-244
    • Cahoon, E.B.1    Shockey, J.M.2    Dietrich, C.R.3    Gidda, S.K.4    Mullen, R.T.5
  • 7
    • 3442894519 scopus 로고    scopus 로고
    • Epistasis: too often neglected in complex trait studies?
    • Carlborg Ö, Haley CS (2004) Epistasis: too often neglected in complex trait studies? Nat Rev Genet 5: 618-625.
    • (2004) Nat Rev Genet , vol.5 , pp. 618-625
    • Carlborg, Ö.1    Haley, C.S.2
  • 8
    • 33645381715 scopus 로고    scopus 로고
    • Epistasis and the release of genetic variation during long-term selection
    • Carlborg Ö, Jacobsson L, Ahgren P, Siegel P, Andersson L (2006) Epistasis and the release of genetic variation during long-term selection. Nat Genet 38: 418-420.
    • (2006) Nat Genet , vol.38 , pp. 418-420
    • Carlborg, Ö.1    Jacobsson, L.2    Ahgren, P.3    Siegel, P.4    Andersson, L.5
  • 9
    • 8444234764 scopus 로고    scopus 로고
    • Wrinkled1 encodes an AP2/ERBP domain protein involved in the control of storage compound biosynthesis in Arabidopsis
    • Cernac A, Benning C (2004) Wrinkled1 encodes an AP2/ERBP domain protein involved in the control of storage compound biosynthesis in Arabidopsis. Plant J 40: 575-585.
    • (2004) Plant J , vol.40 , pp. 575-585
    • Cernac, A.1    Benning, C.2
  • 10
    • 0002498078 scopus 로고    scopus 로고
    • Relationship among analytical methods used to analyse genotypic adaptation in multi-environment trials
    • In Cooper M, Hammer GL (eds), University Press, Cambridge
    • Cooper M, DeLacy IH, Basford KE (1996) Relationship among analytical methods used to analyse genotypic adaptation in multi-environment trials. In Cooper M, Hammer GL (eds) Plant adaptation and crop improvement. University Press, Cambridge.
    • (1996) Plant adaptation and crop improvement
    • Cooper, M.1    DeLacy, I.H.2    Basford, K.E.3
  • 12
    • 70349885473 scopus 로고    scopus 로고
    • Life after GWA studies
    • Dermitzakis ET, Clark AG (2009) Life after GWA studies. Science 326: 239-240.
    • (2009) Science , vol.326 , pp. 239-240
    • Dermitzakis, E.T.1    Clark, A.G.2
  • 13
    • 0032159998 scopus 로고    scopus 로고
    • wrinkled1: a novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism
    • Focks N, Benning C (1998) wrinkled1: a novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism. Plant Physiol 118: 91-101.
    • (1998) Plant Physiol , vol.118 , pp. 91-101
    • Focks, N.1    Benning, C.2
  • 14
    • 77954136357 scopus 로고    scopus 로고
    • Hints of hidden heritability in GWAS
    • Gibson G (2010) Hints of hidden heritability in GWAS. Nat Genet 42: 558-560.
    • (2010) Nat Genet , vol.42 , pp. 558-560
    • Gibson, G.1
  • 16
    • 0000071395 scopus 로고
    • Some distance properties of latent root and vector methods used in multivariate analysis
    • Gower JC (1966) Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika 53: 325-338.
    • (1966) Biometrika , vol.53 , pp. 325-338
    • Gower, J.C.1
  • 17
    • 78651386724 scopus 로고    scopus 로고
    • Does heritability hide in epistasis between linked SNPs?
    • Haig D (2011) Does heritability hide in epistasis between linked SNPs? Eur J Hum Genet 19: 123.
    • (2011) Eur J Hum Genet , vol.19 , pp. 123
    • Haig, D.1
  • 18
    • 77649182884 scopus 로고    scopus 로고
    • Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks
    • He X, Qian W, Wang Z, Li Y, Zhang J (2010) Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks. Nat Genet 42: 272-276.
    • (2010) Nat Genet , vol.42 , pp. 272-276
    • He, X.1    Qian, W.2    Wang, Z.3    Li, Y.4    Zhang, J.5
  • 19
    • 33646226097 scopus 로고
    • Linkage disequilibrium in finite populations
    • Hill WG, Robertson A (1968) Linkage disequilibrium in finite populations. Theor Appl Genet 38: 226-231.
    • (1968) Theor Appl Genet , vol.38 , pp. 226-231
    • Hill, W.G.1    Robertson, A.2
  • 20
    • 2442417788 scopus 로고    scopus 로고
    • Epistasis and plant breeding
    • Holland JB (2001) Epistasis and plant breeding. Plant Breed Rev 21.
    • (2001) Plant Breed Rev , vol.21
    • Holland, J.B.1
  • 21
    • 0002294347 scopus 로고
    • A simple sequentially rejective multiple test procedure
    • Holm S (1979) A simple sequentially rejective multiple test procedure. Scand J Stat 6: 65-70.
    • (1979) Scand J Stat , vol.6 , pp. 65-70
    • Holm, S.1
  • 22
    • 0034972852 scopus 로고    scopus 로고
    • Seed-specific over-expression of an Arabidopsis cDNA encoding a diacylglycerol acyltransferase enhances seed oil content and seed weight
    • Jako C, Kumar A, Wei Y, Zou J, Barton DL et al (2001) Seed-specific over-expression of an Arabidopsis cDNA encoding a diacylglycerol acyltransferase enhances seed oil content and seed weight. Plant Physiol 126: 861-874.
    • (2001) Plant Physiol , vol.126 , pp. 861-874
    • Jako, C.1    Kumar, A.2    Wei, Y.3    Zou, J.4    Barton, D.L.5
  • 23
    • 79251575784 scopus 로고    scopus 로고
    • Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population
    • Kump KL, Bradbury PJ, Wisser RJ, Buckler ES, Belcher AR et al (2011) Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population. Nat Genet 43: 163-168.
    • (2011) Nat Genet , vol.43 , pp. 163-168
    • Kump, K.L.1    Bradbury, P.J.2    Wisser, R.J.3    Buckler, E.S.4    Belcher, A.R.5
  • 25
    • 40049088073 scopus 로고    scopus 로고
    • Population genetic simulation and data analysis with Plabsoft
    • Maurer HP, Melchinger AE, Frisch M (2008) Population genetic simulation and data analysis with Plabsoft. Euphytica 161: 133-139.
    • (2008) Euphytica , vol.161 , pp. 133-139
    • Maurer, H.P.1    Melchinger, A.E.2    Frisch, M.3
  • 26
    • 0031833578 scopus 로고    scopus 로고
    • Quantitative trait locus (QTL) mapping using different testers and independent population samples in maize reveals low power of QTL detection and larger bias in estimates of QTL effects
    • Melchinger AE, Utz HF, Schön CC (1998) Quantitative trait locus (QTL) mapping using different testers and independent population samples in maize reveals low power of QTL detection and larger bias in estimates of QTL effects. Genetics 149: 383-403.
    • (1998) Genetics , vol.149 , pp. 383-403
    • Melchinger, A.E.1    Utz, H.F.2    Schön, C.C.3
  • 27
    • 70749085124 scopus 로고    scopus 로고
    • Comparison of weighting in two-stage analysis of plant breeding trials
    • Möhring J, Piepho HP (2009) Comparison of weighting in two-stage analysis of plant breeding trials. Crop Sci 49: 1977-1988.
    • (2009) Crop Sci , vol.49 , pp. 1977-1988
    • Möhring, J.1    Piepho, H.P.2
  • 28
    • 0242286604 scopus 로고    scopus 로고
    • Mapping determinants of variation in energy metabolism, respiration and flight in Drosophila
    • Montooth KL, Marden JH, Clark AG (2003) Mapping determinants of variation in energy metabolism, respiration and flight in Drosophila. Genetics 165: 623-635.
    • (2003) Genetics , vol.165 , pp. 623-635
    • Montooth, K.L.1    Marden, J.H.2    Clark, A.G.3
  • 29
    • 0032756425 scopus 로고    scopus 로고
    • Changes in Kennedy pathway intermediates associated with increased triacylglycerol synthesis in oil-seed rape
    • Perry HJ, Bligny R, Gout E, Harwood JL (1999) Changes in Kennedy pathway intermediates associated with increased triacylglycerol synthesis in oil-seed rape. Phytochemistry 52: 799-804.
    • (1999) Phytochemistry , vol.52 , pp. 799-804
    • Perry, H.J.1    Bligny, R.2    Gout, E.3    Harwood, J.L.4
  • 30
    • 54149088214 scopus 로고    scopus 로고
    • Epistasis-the essential role of gene interactions in the structure and evolution of genetic systems
    • Phillips PC (2008) Epistasis-the essential role of gene interactions in the structure and evolution of genetic systems. Nat Rev Genet 9: 855-867.
    • (2008) Nat Rev Genet , vol.9 , pp. 855-867
    • Phillips, P.C.1
  • 31
    • 79961210802 scopus 로고    scopus 로고
    • Mapping QTLs with main and epistatic effects underlying grain yield and heading time in soft winter wheat
    • Reif JC, Maurer HP, Korzun V, Ebmeyer E, Miedaner T et al (2011) Mapping QTLs with main and epistatic effects underlying grain yield and heading time in soft winter wheat. Theor Appl Genet 123: 283-292.
    • (2011) Theor Appl Genet , vol.123 , pp. 283-292
    • Reif, J.C.1    Maurer, H.P.2    Korzun, V.3    Ebmeyer, E.4    Miedaner, T.5
  • 32
    • 77953366823 scopus 로고    scopus 로고
    • Biosynthesis of glucosinolates-gene discovery and beyond
    • Sonderby IE, Geu-Flores F, Halkier BA (2010) Biosynthesis of glucosinolates-gene discovery and beyond. Trends Plant Sci 15: 283-290.
    • (2010) Trends Plant Sci , vol.15 , pp. 283-290
    • Sonderby, I.E.1    Geu-Flores, F.2    Halkier, B.A.3
  • 33
    • 33846604202 scopus 로고    scopus 로고
    • Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions
    • St Onge RP, Mani R, Oh J, Proctor M, Fung E et al (2007) Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions. Nat Genet 39: 199-206.
    • (2007) Nat Genet , vol.39 , pp. 199-206
    • St Onge, R.P.1    Mani, R.2    Oh, J.3    Proctor, M.4    Fung, E.5
  • 34
    • 0028641810 scopus 로고
    • Variance components testing in longitudinal mixed effects model
    • Stram DO, Lee JW (1994) Variance components testing in longitudinal mixed effects model. Biometrics 50: 1171-1177.
    • (1994) Biometrics , vol.50 , pp. 1171-1177
    • Stram, D.O.1    Lee, J.W.2
  • 35
    • 0038646820 scopus 로고    scopus 로고
    • Both antisense and sense expression of biotin carboxyl carrier protein isoform 2 inactivates the plastid acetyl-coenzyme A carboxylase in Arabidopsis thaliana
    • Thelen JJ, Ohlrogge JB (2002) Both antisense and sense expression of biotin carboxyl carrier protein isoform 2 inactivates the plastid acetyl-coenzyme A carboxylase in Arabidopsis thaliana. Plant J 32: 419-431.
    • (2002) Plant J , vol.32 , pp. 419-431
    • Thelen, J.J.1    Ohlrogge, J.B.2
  • 36
    • 0035028260 scopus 로고    scopus 로고
    • Brassicaceae express multiple isoforms of biotin carboxyl carrier protein in a tissue-specific manner
    • Thelen JJ, Mekhedov S, Ohlrogge JB (2001) Brassicaceae express multiple isoforms of biotin carboxyl carrier protein in a tissue-specific manner. Plant Physiol 125: 2016-2028.
    • (2001) Plant Physiol , vol.125 , pp. 2016-2028
    • Thelen, J.J.1    Mekhedov, S.2    Ohlrogge, J.B.3
  • 37
    • 10744230485 scopus 로고    scopus 로고
    • Global mapping of the yeast genetic interaction network
    • Tong AHY, Lesage G, Bader GD, Ding H, Xu H et al (2004) Global mapping of the yeast genetic interaction network. Science 303: 808-813.
    • (2004) Science , vol.303 , pp. 808-813
    • Tong, A.H.Y.1    Lesage, G.2    Bader, G.D.3    Ding, H.4    Xu, H.5
  • 38
    • 0034087107 scopus 로고    scopus 로고
    • Bias and sampling error of the estimated proportion of genotypic variance explained by quantitative trait loci determined from experimental data in maize using cross validation and validation with independent samples
    • Utz HF, Melchinger AE, Schön CC (2000) Bias and sampling error of the estimated proportion of genotypic variance explained by quantitative trait loci determined from experimental data in maize using cross validation and validation with independent samples. Genetics 154: 1839-1849.
    • (2000) Genetics , vol.154 , pp. 1839-1849
    • Utz, H.F.1    Melchinger, A.E.2    Schön, C.C.3
  • 39
    • 42649123990 scopus 로고    scopus 로고
    • Sizing up human height variation
    • Visscher PM (2008) Sizing up human height variation. Nat Genet 40: 489-490.
    • (2008) Nat Genet , vol.40 , pp. 489-490
    • Visscher, P.M.1
  • 40
    • 0003752712 scopus 로고    scopus 로고
    • 2nd edn., Sunderland: Sinauer Associates
    • Weir BS (1996) Genetic data analysis II, 2nd edn. Sinauer Associates, Sunderland.
    • (1996) Genetic Data Analysis II
    • Weir, B.S.1
  • 42
    • 84863539332 scopus 로고    scopus 로고
    • Mapping QTL for agronomic traits in breeding populations
    • Würschum T (2012) Mapping QTL for agronomic traits in breeding populations. Theor Appl Genet 125: 201-210.
    • (2012) Theor Appl Genet , vol.125 , pp. 201-210
    • Würschum, T.1
  • 44
    • 79958136814 scopus 로고    scopus 로고
    • Genome-wide association mapping reveals epistasis and genetic interaction networks in sugar beet
    • Würschum T, Maurer HP, Schulz B, Möhring J, Reif JC (2011b) Genome-wide association mapping reveals epistasis and genetic interaction networks in sugar beet. Theor Appl Genet 123: 109-118.
    • (2011) Theor Appl Genet , vol.123 , pp. 109-118
    • Würschum, T.1    Maurer, H.P.2    Schulz, B.3    Möhring, J.4    Reif, J.C.5
  • 45
    • 77954140531 scopus 로고    scopus 로고
    • Common SNPs explain a large proportion of the heritability for human height
    • Yang J, Benyamin B, McEvoy BP, Gordon S, Henders AK et al (2010) Common SNPs explain a large proportion of the heritability for human height. Nat Genet 42: 565-569.
    • (2010) Nat Genet , vol.42 , pp. 565-569
    • Yang, J.1    Benyamin, B.2    McEvoy, B.P.3    Gordon, S.4    Henders, A.K.5
  • 46
    • 31744440502 scopus 로고    scopus 로고
    • A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
    • Yu J, Pressoir G, Briggs WH, Bi IV, Yamasaki M et al (2006) A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nat Genet 38: 203-208.
    • (2006) Nat Genet , vol.38 , pp. 203-208
    • Yu, J.1    Pressoir, G.2    Briggs, W.H.3    Bi, I.V.4    Yamasaki, M.5
  • 47
    • 84856405512 scopus 로고    scopus 로고
    • The mystery of missing heritability: genetic interactions create phantom heritability
    • Zuk O, Hechter E, Sunyaev SR, Lander ES (2012) The mystery of missing heritability: genetic interactions create phantom heritability. PNAS 109: 1193-1198.
    • (2012) Pnas , vol.109 , pp. 1193-1198
    • Zuk, O.1    Hechter, E.2    Sunyaev, S.R.3    Lander, E.S.4


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