-
1
-
-
0029095483
-
Time to hit HIV, early and hard
-
Ho DD. 1995. Time to hit HIV, early and hard. N. Engl. J. Med. 333:450- 451.
-
(1995)
N. Engl. J. Med.
, vol.333
, pp. 450-451
-
-
Ho, D.D.1
-
2
-
-
34249883292
-
Decay of the HIV reservoir in patients receiving antiretroviral therapy for extended periods: implications for eradication of virus
-
Chun T-W, Justement JS, Moir S, Hallahan CW, Maenza J, Mullins JI, Collier AC, Corey L, Fauci AS. 2007. Decay of the HIV reservoir in patients receiving antiretroviral therapy for extended periods: implications for eradication of virus. J. Infect. Dis. 195:1762-1764.
-
(2007)
J. Infect. Dis.
, vol.195
, pp. 1762-1764
-
-
Chun, T.-W.1
Justement, J.S.2
Moir, S.3
Hallahan, C.W.4
Maenza, J.5
Mullins, J.I.6
Collier, A.C.7
Corey, L.8
Fauci, A.S.9
-
3
-
-
0038579210
-
+ T cells
-
+ T cells. Nat. Med. 9:727-728.
-
(2003)
Nat. Med.
, vol.9
, pp. 727-728
-
-
Siliciano, J.D.1
Kajdas, J.2
Finzi, D.3
Quinn, T.C.4
Chadwick, K.5
Margolick, J.B.6
Kovacs, C.7
Gange, S.J.8
Siliciano, R.F.9
-
4
-
-
68349139711
-
HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation
-
Chomont N, El-Far M, Ancuta P, Trautmann L, Procopio FA, Yassine- Diab B, Boucher G, Boulassel Ghattas M-RG, Brenchley JM, Schacker TW, Hill BJ, Douek DC, Routy Haddad J-PEK, Sékaly R-P. 2009. HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation. Nat. Med. 15:893-900.
-
(2009)
Nat. Med.
, vol.15
, pp. 893-900
-
-
Chomont, N.1
El-Far, M.2
Ancuta, P.3
Trautmann, L.4
Procopio, F.A.5
Yassine-Diab, B.6
Boucher, G.7
Boulassel Ghattas, M.-R.G.8
Brenchley, J.M.9
Schacker, T.W.10
Hill, B.J.11
Douek, D.C.12
Routy Haddad, J.-P.E.K.13
Sékaly, R.-P.14
-
5
-
-
0030913366
-
Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection
-
Chun TW, Carruth L, Finzi D, Shen X, DiGiuseppe JA, Taylor H, Hermankova M, Chadwick K, Margolick J, Quinn TC, Kuo YH, Brookmeyer R, Zeiger MA, Barditch-Crovo P, Siliciano RF. 1997. Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection. Nature 387:183-188.
-
(1997)
Nature
, vol.387
, pp. 183-188
-
-
Chun, T.W.1
Carruth, L.2
Finzi, D.3
Shen, X.4
DiGiuseppe, J.A.5
Taylor, H.6
Hermankova, M.7
Chadwick, K.8
Margolick, J.9
Quinn, T.C.10
Kuo, Y.H.11
Brookmeyer, R.12
Zeiger, M.A.13
Barditch-Crovo, P.14
Siliciano, R.F.15
-
6
-
-
0028792184
-
vivo fate of HIV-1-infected T cells: quantitative analysis of the transition to stable latency
-
Chun TW, Finzi D, Margolick J, Chadwick K, Schwartz D, Siliciano RF. 1995. In vivo fate of HIV-1-infected T cells: quantitative analysis of the transition to stable latency. Nat. Med. 1:1284 -1290.
-
(1995)
Nat. Med.
, vol.1
, pp. 1284-1290
-
-
Chun, T.W.1
Finzi, D.2
Margolick, J.3
Chadwick, K.4
Schwartz, D.5
Siliciano, R.F.6
-
7
-
-
0030659177
-
Presence of an inducible HIV-1 latent reservoir during highly active antiretroviral therapy
-
Chun TW, Stuyver L, Mizell SB, Ehler LA, Mican JA, Baseler M, Lloyd AL, Nowak MA, Fauci AS. 1997. Presence of an inducible HIV-1 latent reservoir during highly active antiretroviral therapy. Proc. Natl. Acad. Sci. U. S. A. 94:13193-13197.
-
(1997)
Proc. Natl. Acad. Sci. U. S. A.
, vol.94
, pp. 13193-13197
-
-
Chun, T.W.1
Stuyver, L.2
Mizell, S.B.3
Ehler, L.A.4
Mican, J.A.5
Baseler, M.6
Lloyd, A.L.7
Nowak, M.A.8
Fauci, A.S.9
-
8
-
-
14444273439
-
Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy
-
Finzi D, Hermankova M, Pierson T, Carruth LM, Buck C, Chaisson RE, Quinn TC, Chadwick K, Margolick J, Brookmeyer R, Gallant J, Markowitz M, Ho DD, Richman DD, Siliciano RF. 1997. Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy. Science 278:1295-1300.
-
(1997)
Science
, vol.278
, pp. 1295-1300
-
-
Finzi, D.1
Hermankova, M.2
Pierson, T.3
Carruth, L.M.4
Buck, C.5
Chaisson, R.E.6
Quinn, T.C.7
Chadwick, K.8
Margolick, J.9
Brookmeyer, R.10
Gallant, J.11
Markowitz, M.12
Ho, D.D.13
Richman, D.D.14
Siliciano, R.F.15
-
9
-
-
0030712305
-
Recovery of replication-competent HIV despite prolonged suppression of plasma viremia
-
Wong JK, Hezareh M, Günthard HF, Havlir DV, Ignacio CC, Spina CA, Richman DD. 1997. Recovery of replication-competent HIV despite prolonged suppression of plasma viremia. Science 278:1291-1295.
-
(1997)
Science
, vol.278
, pp. 1291-1295
-
-
Wong, J.K.1
Hezareh, M.2
Günthard, H.F.3
Havlir, D.V.4
Ignacio, C.C.5
Spina, C.A.6
Richman, D.D.7
-
10
-
-
0033914367
-
Relationship between pre-existing viral reservoirs and the re-emergence of plasma viremia after discontinuation of highly active anti-retroviral therapy
-
Chun TW, Davey RT, Jr, Ostrowski M, Shawn Justement J, Engel D, Mullins JI, Fauci AS. 2000. Relationship between pre-existing viral reservoirs and the re-emergence of plasma viremia after discontinuation of highly active anti-retroviral therapy. Nat. Med. 6:757-761.
-
(2000)
Nat. Med.
, vol.6
, pp. 757-761
-
-
Chun, T.W.1
Davey Jr., R.T.2
Ostrowski, M.3
Shawn Justement, J.4
Engel, D.5
Mullins, J.I.6
Fauci, A.S.7
-
11
-
-
0036138852
-
Evidence for human immunodeficiency virus type 1 replication in vivo in CD14(+) monocytes and its potential role as a source of virus in patients on highly active antiretroviral therapy
-
Zhu T, Muthui D, Holte S, Nickle D, Feng F, Brodie S, Hwangbo Y, Mullins JI, Corey L. 2002. Evidence for human immunodeficiency virus type 1 replication in vivo in CD14(+) monocytes and its potential role as a source of virus in patients on highly active antiretroviral therapy. J. Virol. 76:707-716.
-
(2002)
J. Virol.
, vol.76
, pp. 707-716
-
-
Zhu, T.1
Muthui, D.2
Holte, S.3
Nickle, D.4
Feng, F.5
Brodie, S.6
Hwangbo, Y.7
Mullins, J.I.8
Corey, L.9
-
12
-
-
78650338104
-
HIV-1 viral escape in cerebrospinal fluid of subjects on suppressive antiretroviral treatment
-
Edén, A, Fuchs D, Hagberg L, Nilsson S, Spudich S, Svennerholm B, Price RW, Gisslén M. 2010. HIV-1 viral escape in cerebrospinal fluid of subjects on suppressive antiretroviral treatment. J. Infect. Dis. 202:1819-1825.
-
(2010)
J. Infect. Dis.
, vol.202
, pp. 1819-1825
-
-
Edén, A.1
Fuchs, D.2
Hagberg, L.3
Nilsson, S.4
Spudich, S.5
Svennerholm, B.6
Price, R.W.7
Gisslén, M.8
-
13
-
-
33746791047
-
Viral suppression and immune restoration in the gastrointestinal mucosa of human immunodeficiency virus type 1-infected patients initiating therapy during primary or chronic infection
-
Guadalupe M, Sankaran S, George MD, Reay E, Verhoeven D, Shacklett BL, Flamm J, Wegelin J, Prindiville T, Dandekar S. 2006. Viral suppression and immune restoration in the gastrointestinal mucosa of human immunodeficiency virus type 1-infected patients initiating therapy during primary or chronic infection. J. Virol. 80:8236-8247.
-
(2006)
J. Virol.
, vol.80
, pp. 8236-8247
-
-
Guadalupe, M.1
Sankaran, S.2
George, M.D.3
Reay, E.4
Verhoeven, D.5
Shacklett, B.L.6
Flamm, J.7
Wegelin, J.8
Prindiville, T.9
Dandekar, S.10
-
14
-
-
77649117525
-
Viral sanctuaries during highly active antiretroviral therapy in a nonhuman primate model for AIDS
-
North TW, Higgins J, Deere JD, Hayes TL, Villalobos A, Adamson L, Shacklett BL, Schinazi RF, Luciw PA. 2010. Viral sanctuaries during highly active antiretroviral therapy in a nonhuman primate model for AIDS. J. Virol. 84:2913-2922.
-
(2010)
J. Virol.
, vol.84
, pp. 2913-2922
-
-
North, T.W.1
Higgins, J.2
Deere, J.D.3
Hayes, T.L.4
Villalobos, A.5
Adamson, L.6
Shacklett, B.L.7
Schinazi, R.F.8
Luciw, P.A.9
-
15
-
-
33745245733
-
Residual human immunodeficiency virus type 1 viremia in some patients on antiretroviral therapy is dominated by a small number of invariant clones rarely found in circulating CD4+ T cells
-
Bailey JR, Sedaghat AR, Kieffer T, Brennan T, Lee PK, Wind-Rotolo M, Haggerty CM, Kamireddi AR, Liu Y, Lee J, Persaud D, Gallant JE, Cofrancesco J, Quinn TC, Wilke CO, Ray SC, Siliciano JD, Nettles RE, Siliciano RF. 2006. Residual human immunodeficiency virus type 1 viremia in some patients on antiretroviral therapy is dominated by a small number of invariant clones rarely found in circulating CD4+ T cells. J. Virol. 80:6441-6457.
-
(2006)
J. Virol.
, vol.80
, pp. 6441-6457
-
-
Bailey, J.R.1
Sedaghat, A.R.2
Kieffer, T.3
Brennan, T.4
Lee, P.K.5
Wind-Rotolo, M.6
Haggerty, C.M.7
Kamireddi, A.R.8
Liu, Y.9
Lee, J.10
Persaud, D.11
Gallant, J.E.12
Cofrancesco, J.13
Quinn, T.C.14
Wilke, C.O.15
Ray, S.C.16
Siliciano, J.D.17
Nettles, R.E.18
Siliciano, R.F.19
-
16
-
-
67249121143
-
Treatment intensification does not reduce residual HIV-1 viremia in patients on highly active antiretroviral therapy
-
Dinoso JB, Kim SY, Wiegand AM, Palmer SE, Gange SJ, Cranmer L, O'Shea A, Callender M, Spivak A, Brennan T, Kearney MF, Proschan MA, Mican JM, Rehm CA, Coffin JM, Mellors JW, Siliciano RF, Maldarelli F. 2009. Treatment intensification does not reduce residual HIV-1 viremia in patients on highly active antiretroviral therapy. Proc. Natl. Acad. Sci. U. S. A. 106:9403-9408.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 9403-9408
-
-
Dinoso, J.B.1
Kim, S.Y.2
Wiegand, A.M.3
Palmer, S.E.4
Gange, S.J.5
Cranmer, L.6
O'shea, A.7
Callender, M.8
Spivak, A.9
Brennan, T.10
Kearney, M.F.11
Proschan, M.A.12
Mican, J.M.13
Rehm, C.A.14
Coffin, J.M.15
Mellors, J.W.16
Siliciano, R.F.17
Maldarelli, F.18
-
17
-
-
58149382617
-
Evidence for persistent low-level viremia in individuals who control human immunodeficiency virus in the absence of antiretroviral therapy
-
Hatano H, Delwart EL, Norris PJ, Lee Dunn-Williams T-HJ, Hunt PW, Hoh R, Stramer SL, Linnen JM, McCune JM, Martin JN, Busch MP, Deeks SG. 2009. Evidence for persistent low-level viremia in individuals who control human immunodeficiency virus in the absence of antiretroviral therapy. J. Virol. 83:329 -335.
-
(2009)
J. Virol.
, vol.83
, pp. 329-335
-
-
Hatano, H.1
Delwart, E.L.2
Norris, P.J.3
Lee Dunn-Williams, T.-H.J.4
Hunt, P.W.5
Hoh, R.6
Stramer, S.L.7
Linnen, J.M.8
McCune, J.M.9
Martin, J.N.10
Busch, M.P.11
Deeks, S.G.12
-
18
-
-
34247584237
-
ART suppresses plasma HIV-1 RNA to a stable set point predicted by pretherapy viremia
-
doi:10.1371/journal.ppat.0030046
-
Maldarelli F, Palmer S, King MS, Wiegand A, Polis MA, Mican J, Kovacs JA, Davey RT, Rock-Kress D, Dewar R, Liu S, Metcalf JA, Rehm C, Brun SC, Hanna GJ, Kempf DJ, Coffin JM, Mellors JW. 2007. ART suppresses plasma HIV-1 RNA to a stable set point predicted by pretherapy viremia. PLoS Pathog. 3:e46. doi:10.1371/journal.ppat.0030046.
-
(2007)
PLoS Pathog.
, vol.3
-
-
Maldarelli, F.1
Palmer, S.2
King, M.S.3
Wiegand, A.4
Polis, M.A.5
Mican, J.6
Kovacs, J.A.7
Davey, R.T.8
Rock-Kress, D.9
Dewar, R.10
Liu, S.11
Metcalf, J.A.12
Rehm, C.13
Brun, S.C.14
Hanna, G.J.15
Kempf, D.J.16
Coffin, J.M.17
Mellors, J.W.18
-
19
-
-
22544461340
-
Evidence that low-level viremias during effective highly active antiretroviral therapy result from two processes: expression of archival virus and replication of virus
-
Tobin NH, Learn GH, Holte SE, Wang Y, Melvin AJ, McKernan JL, Pawluk DM, Mohan KM, Lewis PF, Mullins JI, Frenkel LM. 2005. Evidence that low-level viremias during effective highly active antiretroviral therapy result from two processes: expression of archival virus and replication of virus. J. Virol. 79:9625-9634.
-
(2005)
J. Virol.
, vol.79
, pp. 9625-9634
-
-
Tobin, N.H.1
Learn, G.H.2
Holte, S.E.3
Wang, Y.4
Melvin, A.J.5
McKernan, J.L.6
Pawluk, D.M.7
Mohan, K.M.8
Lewis, P.F.9
Mullins, J.I.10
Frenkel, L.M.11
-
20
-
-
84863115427
-
Plasma HIV-1 RNA detection below 50 copies/ml and risk of virologic rebound in patients receiving highly active antiretroviral therapy
-
Doyle T, Smith C, Vitiello P, Cambiano V, Johnson M, Owen A, Phillips AN, Geretti AM. 2012. Plasma HIV-1 RNA detection below 50 copies/ml and risk of virologic rebound in patients receiving highly active antiretroviral therapy. Clin. Infect. Dis. 54:724 -732.
-
(2012)
Clin. Infect. Dis.
, vol.54
, pp. 724-732
-
-
Doyle, T.1
Smith, C.2
Vitiello, P.3
Cambiano, V.4
Johnson, M.5
Owen, A.6
Phillips, A.N.7
Geretti, A.M.8
-
21
-
-
0038371316
-
Multiple viral genetic analyses detecting low-level human immunodeficiency virus type 1 replication during effective highly active antiretroviral therapy
-
Frenkel LM, Wang Y, Learn GH, McKernan JL, Ellis GM, Mohan KM, Holte SE, De Vange SM, Pawluk DM, Melvin AJ, Lewis PF, Heath LM, Beck IA, Mahalanabis M, Naugler WE, Tobin NH, Mullins JI. 2003. Multiple viral genetic analyses detecting low-level human immunodeficiency virus type 1 replication during effective highly active antiretroviral therapy. J. Virol. 77:5721-5730.
-
(2003)
J. Virol.
, vol.77
, pp. 5721-5730
-
-
Frenkel, L.M.1
Wang, Y.2
Learn, G.H.3
McKernan, J.L.4
Ellis, G.M.5
Mohan, K.M.6
Holte, S.E.7
De Vange, S.M.8
Pawluk, D.M.9
Melvin, A.J.10
Lewis, P.F.11
Heath, L.M.12
Beck, I.A.13
Mahalanabis, M.14
Naugler, W.E.15
Tobin, N.H.16
Mullins, J.I.17
-
22
-
-
0242629783
-
Evolution of envelope sequences of human immunodeficiency virus type 1 in cellular reservoirs in the setting of potent antiviral therapy
-
Günthard HF, Frost SD, Leigh-Brown AJ, Ignacio CC, Kee K, Perelson AS, Spina CA, Havlir DV, Hezareh M, Looney DJ, Richman DD, Wong JK. 1999. Evolution of envelope sequences of human immunodeficiency virus type 1 in cellular reservoirs in the setting of potent antiviral therapy. J. Virol. 73:9404 -9412.
-
(1999)
J. Virol.
, vol.73
, pp. 9404-9412
-
-
Gunthard, H.F.1
Frost, S.D.2
Leigh-Brown, A.J.3
Ignacio, C.C.4
Kee, K.5
Perelson, A.S.6
Spina, C.A.7
Havlir, D.V.8
Hezareh, M.9
Looney, D.J.10
Richman, D.D.11
Wong, J.K.12
-
23
-
-
0033966504
-
Persistence of episomal HIV-1 infection intermediates in patients on highly active anti-retroviral therapy
-
Sharkey ME, Teo I, Greenough T, Sharova N, Luzuriaga K, Sullivan JL, Bucy RP, Kostrikis LG, Haase A, Veryard C, Davaro RE, Cheeseman SH, Daly JS, Bova C, Ellison RT, Mady B, Lai KK, Moyle G, Nelson M, Gazzard B, Shaunak S, Stevenson M. 2000. Persistence of episomal HIV-1 infection intermediates in patients on highly active anti-retroviral therapy. Nat. Med. 6:76-81.
-
(2000)
Nat. Med.
, vol.6
, pp. 76-81
-
-
Sharkey, M.E.1
Teo, I.2
Greenough, T.3
Sharova, N.4
Luzuriaga, K.5
Sullivan, J.L.6
Bucy, R.P.7
Kostrikis, L.G.8
Haase, A.9
Veryard, C.10
Davaro, R.E.11
Cheeseman, S.H.12
Daly, J.S.13
Bova, C.14
Ellison, R.T.15
Mady, B.16
Lai, K.K.17
Moyle, G.18
Nelson, M.19
Gazzard, B.20
Shaunak, S.21
Stevenson, M.22
more..
-
24
-
-
70349296826
-
Identification of ongoing human immunodeficiency virus type 1 (HIV-1) replication in residual viremia during recombinant HIV-1 poxvirus immunizations in patients with clinically undetectable viral loads on durable suppressive highly active antiretroviral therapy
-
Shiu C, Cunningham CK, Greenough T, Muresan P, Sanchez-Merino V, Carey V, Jackson JB, Ziemniak C, Fox L, Belzer M, Ray SC, Luzuriaga K, Persaud D. 2009. Identification of ongoing human immunodeficiency virus type 1 (HIV-1) replication in residual viremia during recombinant HIV-1 poxvirus immunizations in patients with clinically undetectable viral loads on durable suppressive highly active antiretroviral therapy. J. Virol. 83:9731-9742.
-
(2009)
J. Virol.
, vol.83
, pp. 9731-9742
-
-
Shiu, C.1
Cunningham, C.K.2
Greenough, T.3
Muresan, P.4
Sanchez-Merino, V.5
Carey, V.6
Jackson, J.B.7
Ziemniak, C.8
Fox, L.9
Belzer, M.10
Ray, S.C.11
Luzuriaga, K.12
Persaud, D.13
-
25
-
-
0033609373
-
Quantifying residual HIV-1 replication in patients receiving combination antiretroviral therapy
-
Zhang L, Ramratnam B, Tenner-Racz K, He Y, Vesanen M, Lewin S, Talal A, Racz P, Perelson AS, Korber BT, Markowitz M, Ho DD. 1999. Quantifying residual HIV-1 replication in patients receiving combination antiretroviral therapy. N. Engl. J. Med. 340:1605-1613.
-
(1999)
N. Engl. J. Med.
, vol.340
, pp. 1605-1613
-
-
Zhang, L.1
Ramratnam, B.2
Tenner-Racz, K.3
He, Y.4
Vesanen, M.5
Lewin, S.6
Talal, A.7
Racz, P.8
Perelson, A.S.9
Korber, B.T.10
Markowitz, M.11
Ho, D.D.12
-
26
-
-
34247210615
-
Slow human immunodeficiency virus type 1 evolution in viral reservoirs in infants treated with effective antiretroviral therapy
-
Persaud D, Ray SC, Kajdas J, Ahonkhai A, Siberry GK, Ferguson K, Ziemniak C, Quinn TC, Casazza JP, Zeichner S, Gange SJ, Watson DC. 2007. Slow human immunodeficiency virus type 1 evolution in viral reservoirs in infants treated with effective antiretroviral therapy. AIDS Res. Hum. Retroviruses 23:381-390.
-
(2007)
AIDS Res. Hum. Retroviruses
, vol.23
, pp. 381-390
-
-
Persaud, D.1
Ray, S.C.2
Kajdas, J.3
Ahonkhai, A.4
Siberry, G.K.5
Ferguson, K.6
Ziemniak, C.7
Quinn, T.C.8
Casazza, J.P.9
Zeichner, S.10
Gange, S.J.11
Watson, D.C.12
-
27
-
-
9144270766
-
Continued production of drug-sensitive human immunodeficiency virus type 1 in children on combination antiretroviral therapy who have undetectable viral loads
-
Persaud D, Siberry GK, Ahonkhai A, Kajdas J, Monie D, Hutton N, Watson DC, Quinn TC, Ray SC, Siliciano RF. 2004. Continued production of drug-sensitive human immunodeficiency virus type 1 in children on combination antiretroviral therapy who have undetectable viral loads. J. Virol. 78:968 -979.
-
(2004)
J. Virol.
, vol.78
-
-
Persaud, D.1
Siberry, G.K.2
Ahonkhai, A.3
Kajdas, J.4
Monie, D.5
Hutton, N.6
Watson, D.C.7
Quinn, T.C.8
Ray, S.C.9
Siliciano, R.F.10
-
28
-
-
79955402159
-
+ T cells
-
+ T cells. J. Virol. 85:5220 -5223.
-
(2011)
J. Virol.
, vol.85
, pp. 5220-5223
-
-
Anderson, J.A.1
Archin, N.M.2
Ince, W.3
Parker, D.4
Wiegand, A.5
Coffin, J.M.6
Kuruc, J.7
Eron, J.8
Swanstrom, R.9
Margolis, D.M.10
-
30
-
-
80055078962
-
Deep molecular characterization of HIV-1 dynamics under suppressive HAART
-
doi:10 .1371/journal.ppat.1002314
-
Buzón MJ, Codoñer FM, Frost SDW, Pou C, Puertas MC, Massanella M, Dalmau J, Llibre JM, Stevenson M, Blanco J, Clotet B, Paredes R, Martinez-Picado J. 2011. Deep molecular characterization of HIV-1 dynamics under suppressive HAART. PLoS Pathog. 7:e1002314. doi:10 .1371/journal.ppat.1002314.
-
(2011)
PLoS Pathog.
, vol.7
-
-
Buzón, M.J.1
Codoñer, F.M.2
Frost, S.D.W.3
Pou, C.4
Puertas, M.C.5
Massanella, M.6
Dalmau, J.7
Llibre, J.M.8
Stevenson, M.9
Blanco, J.10
Clotet, B.11
Paredes, R.12
Martinez-Picado, J.13
-
31
-
-
84860908013
-
Absence of HIV-1 evolution in the gut-associated lymphoid tissue from patients on combination antiviraltherapy initiated during primary infection
-
doi: 10.1371/journal.ppat.1002506
-
Evering TH, Mehandru S, Racz P, Tenner-Racz K, Poles MA, Figueroa A, Mohri H, Markowitz M. 2012. Absence of HIV-1 evolution in the gut-associated lymphoid tissue from patients on combination antiviraltherapy initiated during primary infection. PLoS Pathog. 8:e1002506. doi: 10.1371/journal.ppat.1002506.
-
(2012)
PLoS Pathog.
, vol.8
-
-
Evering, T.H.1
Mehandru, S.2
Racz, P.3
Tenner-Racz, K.4
Poles, M.A.5
Figueroa, A.6
Mohri, H.7
Markowitz, M.8
-
32
-
-
68949196315
-
Modeling HIV persistence, the latent reservoir, and viral blips
-
Rong L, Perelson AS. 2009. Modeling HIV persistence, the latent reservoir, and viral blips. J. Theor. Biol. 260:308 -331.
-
(2009)
J. Theor. Biol.
, vol.260
, pp. 308-331
-
-
Rong, L.1
Perelson, A.S.2
-
33
-
-
66149128413
-
Monotypic human immunodeficiency virus type 1 genotypes across the uterine cervix and in blood suggest proliferation of cells with provirus
-
Bull ME, Learn GH, McElhone S, Hitti J, Lockhart D, Holte S, Dragavon J, Coombs RW, Mullins JI, Frenkel LM. 2009. Monotypic human immunodeficiency virus type 1 genotypes across the uterine cervix and in blood suggest proliferation of cells with provirus. J. Virol. 83:6020-6028.
-
(2009)
J. Virol.
, vol.83
, pp. 6020-6028
-
-
Bull, M.E.1
Learn, G.H.2
McElhone, S.3
Hitti, J.4
Lockhart, D.5
Holte, S.6
Dragavon, J.7
Coombs, R.W.8
Mullins, J.I.9
Frenkel, L.M.10
-
34
-
-
33947730608
-
Asymmetric T lymphocyte division in the initiation of adaptive immune responses
-
Chang JT, Palanivel VR, Kinjyo I, Schambach F, Intlekofer AM, Banerjee A, Longworth SA, Vinup KE, Mrass P, Oliaro J, Killeen N, Orange JS, Russell SM, Weninger W, Reiner SL. 2007. Asymmetric T lymphocyte division in the initiation of adaptive immune responses. Science 315:1687-1691.
-
(2007)
Science
, vol.315
, pp. 1687-1691
-
-
Chang, J.T.1
Palanivel, V.R.2
Kinjyo, I.3
Schambach, F.4
Intlekofer, A.M.5
Banerjee, A.6
Longworth, S.A.7
Vinup, K.E.8
Mrass, P.9
Oliaro, J.10
Killeen, N.11
Orange, J.S.12
Russell, S.M.13
Weninger, W.14
Reiner, S.L.15
-
35
-
-
67049156200
-
Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses
-
Wagner TA, Tobin NH, McKernan JL, Xu M, Melvin AJ, Mohan KM, Learn GH, Mullins JI, Frenkel LM. 2009. Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses. AIDS 23:923-928.
-
(2009)
AIDS
, vol.23
, pp. 923-928
-
-
Wagner, T.A.1
Tobin, N.H.2
McKernan, J.L.3
Xu, M.4
Melvin, A.J.5
Mohan, K.M.6
Learn, G.H.7
Mullins, J.I.8
Frenkel, L.M.9
-
37
-
-
36448991500
-
Clustal W and Clustal X version 2.0.
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23:2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
38
-
-
77954067056
-
DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites
-
Deng W, Maust BS, Nickle DC, Learn GH, Liu Y, Heath L, Kosakovsky Pond SL, Mullins JI. 2010. DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites. Biotechniques 48: 405-408.
-
(2010)
Biotechniques
, vol.48
, pp. 405-408
-
-
Deng, W.1
Maust, B.S.2
Nickle, D.C.3
Learn, G.H.4
Liu, Y.5
Heath, L.6
Kosakovsky Pond, S.L.7
Mullins, J.I.8
-
39
-
-
74549125386
-
SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building
-
Gouy M, Guindon S, Gascuel O. 2010. SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol. Biol. Evol. 27:221-224.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
40
-
-
10744231634
-
Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences
-
Jensen MA, Li F-S, van't Wout AB, Nickle DC, Shriner D, He H-X, McLaughlin S, Shankarappa R, Margolick JB, Mullins JI. 2003. Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences. J. Virol. 77:13376 -13388.
-
(2003)
J. Virol.
, vol.77
, pp. 13376-13388
-
-
Jensen, M.A.1
Li, F.-S.2
van't Wout, A.B.3
Nickle, D.C.4
Shriner, D.5
He, H.-X.6
McLaughlin, S.7
Shankarappa, R.8
Margolick, J.B.9
Mullins, J.I.10
-
41
-
-
0026739607
-
Signature pattern analysis: a method for assessing viral sequence relatedness
-
Korber B, Myers G. 1992. Signature pattern analysis: a method for assessing viral sequence relatedness. AIDS Res. Hum. Retroviruses 8:1549-1560.
-
(1992)
AIDS Res. Hum. Retroviruses
, vol.8
, pp. 1549-1560
-
-
Korber, B.1
Myers, G.2
-
42
-
-
0032828561
-
Scanning the available Dictyostelium discoideum proteome for O-linked GlcNAc glycosylation sites using neural networks
-
Gupta R, Jung E, Gooley AA, Williams KL, Brunak S, Hansen J. 1999. Scanning the available Dictyostelium discoideum proteome for O-linked GlcNAc glycosylation sites using neural networks. Glycobiology 9:1009-1022.
-
(1999)
Glycobiology
, vol.9
, pp. 1009-1022
-
-
Gupta, R.1
Jung, E.2
Gooley, A.A.3
Williams, K.L.4
Brunak, S.5
Hansen, J.6
-
43
-
-
13644257223
-
Prediction, conservation analysis, and structural characterization of mammalian mucintype O-glycosylation sites
-
Julenius K, Mølgaard A, Gupta R, Brunak S. 2005. Prediction, conservation analysis, and structural characterization of mammalian mucintype O-glycosylation sites. Glycobiology 15:153-164.
-
(2005)
Glycobiology
, vol.15
, pp. 153-164
-
-
Julenius, K.1
Mølgaard, A.2
Gupta, R.3
Brunak, S.4
-
44
-
-
84861559237
-
Hematopoietic precursor cells isolated from patients on long-term suppressive HIV therapy did not contain HIV-1 DNA
-
Josefsson L, Eriksson S, Sinclair E, Ho T, Killian M, Epling L, Shao W, Lewis B, Bacchetti P, Loeb L, Custer J, Poole L, Hecht FM, Palmer S. 2012. Hematopoietic precursor cells isolated from patients on long-term suppressive HIV therapy did not contain HIV-1 DNA. J. Infect. Dis. 206: 28-34.
-
(2012)
J. Infect. Dis.
, vol.206
, pp. 28-34
-
-
Josefsson, L.1
Eriksson, S.2
Sinclair, E.3
Ho, T.4
Killian, M.5
Epling, L.6
Shao, W.7
Lewis, B.8
Bacchetti, P.9
Loeb, L.10
Custer, J.11
Poole, L.12
Hecht, F.M.13
Palmer, S.14
-
45
-
-
84873055021
-
Abstr
-
Retroviruses Opportunistic Infect., abstr. 98
-
Kearney et al. 2010. Abstr. 17th Conf. Retroviruses Opportunistic Infect., abstr. 98.
-
(2010)
17th Conf
-
-
Kearney1
-
46
-
-
84863337769
-
Stimulation of HIV-1-specific cytolytic T lymphocytes facilitates elimination of latent viral reservoir after virus reactivation
-
Shan L, Deng K, Shroff NS, Durand CM, Rabi SA, Yang H-C, Zhang H, Margolick JB, Blankson JN, Siliciano RF. 2012. Stimulation of HIV-1-specific cytolytic T lymphocytes facilitates elimination of latent viral reservoir after virus reactivation. Immunity 36:491-501.
-
(2012)
Immunity
, vol.36
, pp. 491-501
-
-
Shan, L.1
Deng, K.2
Shroff, N.S.3
Durand, C.M.4
Rabi, S.A.5
Yang, H.-C.6
Zhang, H.7
Margolick, J.B.8
Blankson, J.N.9
Siliciano, R.F.10
-
47
-
-
80052395837
-
Cell-to-cell spread of HIV permits ongoing replication despite antiretroviral therapy
-
Sigal A, Kim JT, Balazs AB, Dekel E, Mayo A, Milo R, Baltimore D. 2011. Cell-to-cell spread of HIV permits ongoing replication despite antiretroviral therapy. Nature 477:95-98.
-
(2011)
Nature
, vol.477
, pp. 95-98
-
-
Sigal, A.1
Kim, J.T.2
Balazs, A.B.3
Dekel, E.4
Mayo, A.5
Milo, R.6
Baltimore, D.7
-
48
-
-
46949095221
-
+ T cells by genome editing using zinc-finger nucleases
-
+ T cells by genome editing using zinc-finger nucleases. Nat. Biotechnol. 26:808-816.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 808-816
-
-
Perez, E.E.1
Wang, J.2
Miller, J.C.3
Jouvenot, Y.4
Kim, K.A.5
Liu, O.6
Wang, N.7
Lee, G.8
Bartsevich, V.V.9
Lee, Y.-L.10
Guschin, D.Y.11
Rupniewski, I.12
Waite, A.J.13
Carpenito, C.14
Carroll, R.G.15
Orange, J.S.16
Urnov, F.D.17
Rebar, E.J.18
Ando, D.19
Gregory, P.D.20
Riley, J.L.21
Holmes, M.C.22
June, C.H.23
more..
-
49
-
-
84858645007
-
Therapeutic DNA vaccine induces broad T cell responses in the gut and sustained protection from viral rebound and AIDS in SIV-infected rhesus macaques
-
doi:10.1371/journal.pone.0033715
-
Fuller DH, Rajakumar P, Che JW, Narendran A, Nyaundi J, Michael H, Yager EJ, Stagnar C, Wahlberg B, Taber R, Haynes JR, Cook FC, Ertl P, Tite J, Amedee AM, Murphey-Corb M. 2012. Therapeutic DNA vaccine induces broad T cell responses in the gut and sustained protection from viral rebound and AIDS in SIV-infected rhesus macaques. PLoS One 7:e33715. doi:10.1371/journal.pone.0033715.
-
(2012)
PLoS One
, vol.7
-
-
Fuller, D.H.1
Rajakumar, P.2
Che, J.W.3
Narendran, A.4
Nyaundi, J.5
Michael, H.6
Yager, E.J.7
Stagnar, C.8
Wahlberg, B.9
Taber, R.10
Haynes, J.R.11
Cook, F.C.12
Ertl, P.13
Tite, J.14
Amedee, A.M.15
Murphey-Corb, M.16
|