Association of ISSR markers with some biochemical traits of Valeriana jatamansi Jones

Industrial Crops and Products

Volumn 44, Issue , 2013, Pages 671-676

  Jugran, Arun ^a   Rawat, Sandeep ^a   Dauthal, Preeti ^a   Mondal, Suvendu ^b   Bhatt, Indra D ^a   Rawal, Ranbeer S ^a  

^a G B PANT INSTITUTE OF HIMALAYAN ENVIRONMENT AND DEVELOPMENT   (India)

^b BHABHA ATOMIC RESEARCH CENTRE   (India)

Author keywords

Antioxidants; Genetic diversity; ISSR; Medicinal plant

Indexed keywords

ANTIOXIDANT ACTIVITIES; ANTIOXIDANTS; BIOCHEMICAL TRAITS; BREEDING PROGRAMMES; DPPH ASSAY; GENETIC DIVERSITY; GENETIC INFORMATION; IN-VITRO ASSAYS; INFORMATION INDEX; ISSR; LINKAGE MAP; MEDICINAL PLANTS; POLYMORPHIC BANDS; QUANTITATIVE TRAIT LOCUS; TOTAL PHENOLICS; VALERIANA JATAMANSI;

AGENTS; BIODIVERSITY; FLAVONOIDS; GENES; PHENOLS;

PLANTS (BOTANY);

ANGIOSPERM; ANTIOXIDANT; ASSAY; BIOCHEMISTRY; BREEDING; GENETIC DIFFERENTIATION; GENETIC MARKER; PHENOLIC COMPOUND; TANNIN;

VALERIANA; VALERIANA JATAMANSI;

EID: 84872496004     PISSN: 09266690     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.indcrop.2012.09.004     Document Type: Article

References (53)

1. Andola H.C., Gaira K.S., Rawal R.S., Rawat M.S.M., Bhatt I.D. Habitat dependent variation in berberine content of Berberis asiatica Roxb ex. DC. in Kumaon, western Himalaya. Chem. Biodivers. 2010, 7:415-420.
2. Bhatt I.D., Dauthal P., Rawat S., Gaira K.S., Jugran A., Rawal R.S., Dhar U. Characterization of essential oil composition, phenolic content, and antioxidant properties in wild and planted individuals of Valeriana jatamansi Jones. Sci. Hortic. 2012, 136:61-68.
3. CAMP Conservation assessment and management prioritization: for the medicinal plants of Himachal Pradesh, Jammu & Kashmir and Uttarakhand. Proceeding of the Workshop held at Shimla. Hosted by Foundation for Revitalization of Local Health Traditions (FRLHT) 2003.
4. Chang C., Yang M., Wen H., Chern J. Estimation of total flavonoids content in propolis by two complementary colorimetric methods. J. Food Drug Anal. 2002, 10:178-182.
5. Chatterjee S.N., Mohandas T.P. Identification of ISSR markers associated with productivity traits in silkworm, Bombyx mori L. Genome 2003, 46:438-447.
6. Connor A.M., Finn C.E., Alspach P.A. Genotypic and environmental variation in antioxidant activity and total phenolic content among Blackberry and Hybridberry cultivars. J. Am. Soc. Hortic. Sci. 2005, 130:527-533.
7. Doyle J.J., Doyle J.L. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 1987, 19:11-15.
8. Egisdottir H.H., Kuss P., Stocklin J. Isolated populations of a rare alpine plant show high genetic diversity and considerable population differentiation. Ann. Bot. 2009, 10.1093/aob/mcp242.
9. Ganopoulos I.V., Kazantzis K., Chatzicharisis I., Karayiamis I., Tsaftaris A.S. Genetic diversity, structure and fruit associations in Greek sweet cherry cultivars using microsatellite (SSR/ISSR) and morpho-physiological markers. Euphytica 2011, 10.1007/S10681-011-0416-Z.
10. Grassi F., Imazio S., Gomarasca S., Citterio S., Aina R., Sgorbati S., Sala F., Patrignani G., Labra M. Population structure and genetic variation within Valeriana wallrothii Kreyer in relation to different ecological locations. Plant Sci. 2004, 166:1437-1441.
11. Hamrick J.L., Godt M.J.W. Allozyme diversity in plant species. Plant Population Genetics, Breeding and Genetic Resources 1989, 43-63. Sinauer Associates Incorporation, Sunderland, MA. A.H.D. Brown, M.T. Clegg, A.L. Kahler, B.S. Weir (Eds.).
12. Houghton P.J. Valerian the Genus Valeriana 1999, Harwood Academic Publishers, Amsterdam, pp. 1-139.
13. Kalim M.D., Bhattacharya D., Banerjee A., Chattopadhyay S. Oxidative DNA damage preventive activity and antioxidant potential of plants used in Unani system of medicine. BMC Complement. Altern. Med. 2010, 10:77. http://www.biomedcentral.com/1472-6882/10/77.
14. Kar P.K., Srivastava P.P., Awasthi A.K., Urs S.R. Genetic variability and association of ISSR markers with some biochemical traits in mulberry (Morus spp.) genetic resources available in India. Tree Genet. Genomes 2008, 4:75-83.
15. Karp, A., Kresovich, S., Bhat, K.V., Ayada, W.G., Hodgkin, T., 1997. Molecular tools in plant genetic resources conservation: a guide to the technologies. IPGRI technical bulletin No. 2. International Plant genetic Resources Institute, Rome, Italy.
16. Laurentin H., Ratzinger A., Karlovsky P. Relationship between metabolic and genomic diversity in sesame (Sesamum indicum L.). BMC Genomics 2008, 9:250.
17. Levin D.A. Polyploidy and novelty in flowering plants. Am. Nat. 1983, 122:1-25.
18. Li H., Raun C.H., Teixeira da Silva J.A., Liu B.Q. Associations of SRAP markers with dried - shrink disease resistance in a germplasm collection of sea buckthorn (Hippophae L.). Genome 2010, 53:447-457.
19. Loveless M.D., Hamrick J.L. Ecological determinants of genetic structure in plant populations. Ann. Rev. Ecol. Syst. 1984, 15:65-95.
20. Mantel N.A. The detection of disease clustering and a generalized regression approach. Cancer Res. 1967, 27:209-220.
21. Mathela C.S., Sati S., Chanotiya C.S. Comparative investigations of the leaf and root oils of Valeriana wallichii DC from Northwestern Himalaya. J. Essent. Oil Res. 2005, 17:408-409.
22. Maureira-Butler I.J., Udall J.A., Osborn T.C. Analyses of a multi-parent population derived from two diverse alfalfa germplasm: testcross evaluations and phenotype-DNA associations. Theor. Appl. Genet. 2007, 115:859-867.
23. Meyer A.S., Donovan J.L., Pearson D.A., Waterhouse A.L., Frankel E.N. Fruit hydroxycinnamic acids inhibit human low density lipoprotein oxidation in vitro. J. Agric. Food Chem. 1998, 46:1783-1787.
24. Miller M.P. Tools for Population Genetic Analyses (TFPGA) 1. 3: A Windows Program for the Analysis of Allozyme and Molecular Population Genetic Data (Computer Software distributed by Author) 1997.
25. Mishra R.K., Sen-Mandi S. Molecular profiling and development of DNA marker associated with drought tolerance in tea clones growing in Darjeeling. Curr. Sci. 2004, 87:60-66.
26. Mondal S., Badigannvar A.M. Molecular diversity and association of SSR markers to rust and late leaf spotresistance in cultivated groundnut (Arachis hypogaea L.). Plant Breed. 2010, 129:68-71.
27. Nei M. Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. U.S.A. 1973, 70:3321-3323.
28. Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 1978, 89:583-590.
29. Nwinuka N.M., Ibeh G.O., Ekeke G.I. Proximate composition and levels of some toxicants in four commonly consumed species. J. Appl. Sci. Environ. Manage. 2005, 9:150-155.
30. Pacifico D., Miselli F., Micheler M., Carboni A., Paolo R., Mandolino G. Genetics and marker assisted selection of the chemotype in Canabis sativa L. Mol. Breed. 2006, 17:257-268.
31. Parr A.J., Bolwel l.G.P. Phenols in plant and in man: the potential for possible nutritional enhancement of the diet by modifying the phenols content or profile. J. Agric. Food Chem. 2000, 80:985-1012.
32. Peakall R., Smouse P.E. GENALEX 6.1: Genetic Analysis in Excel: population genetic software for teaching and research. Mol. Ecol. Notes 2006, 6:288-295.
33. Powell W., Morgante M., Andre C., Hanafey M., Vogel J., Tingey S., Rafalski A. The comparison of RFLP, RAPD AFLP and SSR (microsatellite) markers for germplasm analysis. Mol. Breed. 1996, 2:225-238.
34. Prakash V. Indian Valerianaceae a Monograph on Medicinally Important Family 1999, Scientific Publishers, India, pp. 1-74.
35. Rajkumar S., Singh S.K., Nag A., Ahuja P.S. Genetic structure of Indian Valerian (Valeriana jatamansi) populations in Western Himalaya revealed by AFLP. Biochem. Genet. 2011, 10.2007/s10528-011-9448-52.
36. Rana M.S., Samant S.S. Threat categorization and conservation prioritization of floristic diversity in the Indian Himalayan region. A state of art approach from Manali wildlife sanctuary. J. Nat. Cons. 2011, 19:137-142.
37. Rawat S., Jugran A., Giri L., Bhatt I.D., Rawal R.S. Assessment of antioxidant properties in fruits of Myrica esculenta: a popular wild edible species in Indian Himalayan region. Evid. Complement. Altern. Med. 2011, 1-8. 10.1093/ecam/neq055.
38. Record I.R., Dreosti I.E., McInerney J.K. Changes in plasma antioxidant status following consumption of diets high or low in fruits and vegetables or following dietary supplementation with an antioxidant mixture. Br. J. Nutr. 2001, 85:4459-4464.
39. Roy J.K., Bandopadhyay R., Rustgi S., Balyan H.S., Gupta P.K. Association analysis of agronomically important traits using SSR SAMPL and AFLP markers in bread wheat. Curr. Sci. 2006, 90:683-689.
40. Ruan C.J., Li H., Mopper S. Characterization and identification of ISSR markers associated with resistance to dried-shrink disease in sea buckthorn. Mol. Breed. 2009, 24:255-268.
41. Samant S.S., Dhar U., Palni L.M.S. Medicinal plants of Himalaya: Diversity Distribution Potential Values 1998, Gyanodaya Prakashan, Nainital, India.
42. Scalbert A., Williamson G. Dietary intake and bioavailability of polyphenols. J. Nutr. 2000, 130:2073S-2085S.
43. Shannon C.E., Weaver W. The Mathematical Theory of Communication 1949, University of Illinois Press, Urbana.
44. Singh N., Gupta A.P., Singh B., Kaul V.K. Quantification of valeric acid in Valeriana jatamansi and Valeriana officinalis by HPTLC. Chromatographia 2006, 63:209-213.
45. Singh R.D., Gopichand, Meena R.L., Sharma B., Singh B., Kaul V.K., Ahuja P.S. Seasonal variation of bioactive components in Valeriana jatamansi from Himachal Pradesh, India. Ind. Crops Prod. 2010, 32:292-296.
46. Singleton V.L., Rossi J.A. Colorimetry of total phenolics with phosphomolybdic-phosphotungstic acid reagents. Am. J. Enol. Viticult. 1965, 16:144-158.
47. Soltis E.D., Soltis P.S. Contributions of plant molecular systematic to studies of molecular evolution. Plant Mol. Biol. 2000, 42:45-75.
48. Surveswaran S., Cai Y.Z., Corke H., Sun M. Systematic evaluation of natural phenolic antioxidants from 133 Indian medicinal plants. Food Chem. 2007, 102:938-953.
49. Swofford D.L., Olsen G.J. Phylogeny reconstruction. Molecular Systematics 1990, Sinaur Associates Inc., Sunderland. D.M. Hillis, C. Moritz (Eds.).
50. Virk P.S., Ford-Lloyd B.V., Jackson M.T., Pooni H.S., Clemeno T.P., Newbury H.J. Predicting quantitative variation within rice germplasm using molecular markers. Heredity 1996, 76:296-304.
51. Virk P.S., Zhu J., Newbury H.J., Bryan G.J., Jackson M.T., Ford-Lloyd B.V. Effectiveness of different classes of molecular markers for classifying and revealing variations in rice (Oryza sativa) germplasm. Euphytica 2000, 112:275-284.
52. Wilkinson L. MY STAT: a personal version of SYSTAT. Am. Stat. 1987, 41:334.
53. Yeh F.C., Yang R.C., Boyle T.B.J., Ye Z.H., Mao J.X. POPGENE: Version 1.32, The User-friendly Shareware for Population Genetic Analysis 1999, Molecular Biology and Biotechnology Centre University of Alberta, Canada.