-
1
-
-
37749047490
-
Sequence census methods for functional genomics
-
Wold B, Myers RM: Sequence census methods for functional genomics. Nature Methods 2008, 5:19-21
-
(2008)
Nature Methods
, vol.5
, pp. 19-21
-
-
Wold, B.1
Myers, R.M.2
-
3
-
-
70449698364
-
Next-generation gap
-
McPherson JD: Next-generation gap. Nature Methods 2009, 6:S2-S5
-
(2009)
Nature Methods
, vol.6
, pp. S2-S5
-
-
McPherson, J.D.1
-
4
-
-
78650775954
-
The $1, 000 genome, the $100, 000 analysis?
-
Mardis E: The $1, 000 genome, the $100, 000 analysis?. Genome Medicine 2010, 2:84
-
(2010)
Genome Medicine
, vol.2
, pp. 84
-
-
Mardis, E.1
-
6
-
-
70449701942
-
Sense from sequence reads: methods for alignment and assembly
-
Flicek P, Birney E: Sense from sequence reads: methods for alignment and assembly. Nature Methods 2009, 6:S6-S12
-
(2009)
Nature Methods
, vol.6
, pp. S6-S12
-
-
Flicek, P.1
Birney, E.2
-
7
-
-
84856246802
-
De novo assembly and genotyping of variants using colored de Bruijn graphs
-
Iqbal Z, Caccamo M, Turner I, Flicek P, McVean G: De novo assembly and genotyping of variants using colored de Bruijn graphs. Nature Genetics 2012, 44:226-232
-
(2012)
Nature Genetics
, vol.44
, pp. 226-232
-
-
Iqbal, Z.1
Caccamo, M.2
Turner, I.3
Flicek, P.4
McVean, G.5
-
8
-
-
77952886150
-
Assembly algorithms for next-generation sequencing data
-
Miller JR, Koren S, Sutton G: Assembly algorithms for next-generation sequencing data. Genomics 2010, 95:315-327
-
(2010)
Genomics
, vol.95
, pp. 315-327
-
-
Miller, J.R.1
Koren, S.2
Sutton, G.3
-
9
-
-
28944439470
-
Beware of mis-assembled genomes
-
Salzberg SL: Beware of mis-assembled genomes. Bioinformatics 2005, 21:4320-4321
-
(2005)
Bioinformatics
, vol.21
, pp. 4320-4321
-
-
Salzberg, S.L.1
-
10
-
-
83855165105
-
Repetitive DNA and next-generation sequencing: computational challenges and solutions
-
Treangen TJ, Salzberg SL: Repetitive DNA and next-generation sequencing: computational challenges and solutions. Nature Reviews Genetics 2011, 13:36-46
-
(2011)
Nature Reviews Genetics
, vol.13
, pp. 36-46
-
-
Treangen, T.J.1
Salzberg, S.L.2
-
11
-
-
19144366814
-
Metagenomics and industrial applications
-
Lorenz P, Eck J: Metagenomics and industrial applications. Nature Reviews Microbiology 2005, 3:510-516
-
(2005)
Nature Reviews Microbiology
, vol.3
, pp. 510-516
-
-
Lorenz, P.1
Eck, J.2
-
12
-
-
84856496549
-
Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
-
Scholz MB, Lo CC, Chain PSG: Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis. Current Opinion in Biotechnology 2012, 23:9-15
-
(2012)
Current Opinion in Biotechnology
, vol.23
, pp. 9-15
-
-
Scholz, M.B.1
Lo, C.C.2
Chain, P.S.G.3
-
13
-
-
46949106154
-
Assembly of viral metagenomes from Yellowstone Hot Springs
-
Schoenfeld T, Patterson M, Richardson PM, Wommack KE, Young M, Mead D: Assembly of viral metagenomes from Yellowstone Hot Springs. Applied and Environmental Microbiology 2008, 74:4164-4174
-
(2008)
Applied and Environmental Microbiology
, vol.74
, pp. 4164-4174
-
-
Schoenfeld, T.1
Patterson, M.2
Richardson, P.M.3
Wommack, K.E.4
Young, M.5
Mead, D.6
-
14
-
-
84855733160
-
Metagenomic analysis of stress genes in microbial mat communities from Antarctica and the high Arctic
-
Varin T, Lovejoy C, Jungblut AD, Vincent WF, Corbeil J: Metagenomic analysis of stress genes in microbial mat communities from Antarctica and the high Arctic. Applied and Environmental Microbiology 2012, 78:549-559
-
(2012)
Applied and Environmental Microbiology
, vol.78
, pp. 549-559
-
-
Varin, T.1
Lovejoy, C.2
Jungblut, A.D.3
Vincent, W.F.4
Corbeil, J.5
-
15
-
-
77958065732
-
Metagenomic profiling of Arctic microbial mat communities as nutrient scavenging and recycling systems
-
Varin T, Lovejoy C, Jungblut AD, Vincent WF, Corbeil J: Metagenomic profiling of Arctic microbial mat communities as nutrient scavenging and recycling systems. Limnology and Oceanography 2010, 55:1901-1911
-
(2010)
Limnology and Oceanography
, vol.55
, pp. 1901-1911
-
-
Varin, T.1
Lovejoy, C.2
Jungblut, A.D.3
Vincent, W.F.4
Corbeil, J.5
-
16
-
-
84355162254
-
De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities
-
Narasingarao P, Podell S, Ugalde JA, Brochier-Armanet C, Emerson JB, Brocks JJ, Heidelberg KB, Banfield JF, Allen EE: De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities. The ISME Journal 2011, 6:81-93
-
(2011)
The ISME Journal
, vol.6
, pp. 81-93
-
-
Narasingarao, P.1
Podell, S.2
Ugalde, J.A.3
Brochier-Armanet, C.4
Emerson, J.B.5
Brocks, J.J.6
Heidelberg, K.B.7
Banfield, J.F.8
Allen, E.E.9
-
17
-
-
20244376755
-
Comparative metagenomics of microbial communities
-
Tringe SG, von Mering C, Kobayashi A, Salamov AA, Chen K, Chang HW, Podar M, Short JM, Mathur EJ, Detter JC, Bork P, Hugenholtz P, Rubin EM: Comparative metagenomics of microbial communities. Science 2005, 308:554-557
-
(2005)
Science
, vol.308
, pp. 554-557
-
-
Tringe, S.G.1
von Mering, C.2
Kobayashi, A.3
Salamov, A.A.4
Chen, K.5
Chang, H.W.6
Podar, M.7
Short, J.M.8
Mathur, E.J.9
Detter, J.C.10
Bork, P.11
Hugenholtz, P.12
Rubin, E.M.13
-
18
-
-
1542377296
-
Community structure and metabolism through reconstruction of microbial genomes from the environment
-
Tyson GW, Chapman J, Hugenholtz P, Allen EE, Ram RJ, Richardson PM, Solovyev VV, Rubin EM, Rokhsar DS, Banfield JF: Community structure and metabolism through reconstruction of microbial genomes from the environment. Nature 2004, 428:37-43
-
(2004)
Nature
, vol.428
, pp. 37-43
-
-
Tyson, G.W.1
Chapman, J.2
Hugenholtz, P.3
Allen, E.E.4
Ram, R.J.5
Richardson, P.M.6
Solovyev, V.V.7
Rubin, E.M.8
Rokhsar, D.S.9
Banfield, J.F.10
-
19
-
-
27744604609
-
Sand DNA-a genetic library of life at the water's edge
-
Naviaux RK, Good B, McPherson JD, Steffen DL, Markusic D, Ransom B, Corbeil J: Sand DNA-a genetic library of life at the water's edge. Marine Ecology Progress Series 2005, 301:9-22
-
(2005)
Marine Ecology Progress Series
, vol.301
, pp. 9-22
-
-
Naviaux, R.K.1
Good, B.2
McPherson, J.D.3
Steffen, D.L.4
Markusic, D.5
Ransom, B.6
Corbeil, J.7
-
20
-
-
84858439578
-
The human microbiome: at the interface of health and disease
-
Cho I, Blaser MJ: The human microbiome: at the interface of health and disease. Nature Reviews Genetics 2012, 13:260-270
-
(2012)
Nature Reviews Genetics
, vol.13
, pp. 260-270
-
-
Cho, I.1
Blaser, M.J.2
-
21
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, Gordon JI, Relman DA, Fraser-Liggett CM, Nelson KE: Metagenomic analysis of the human distal gut microbiome. Science 2006, 312:1355-1359
-
(2006)
Science
, vol.312
, pp. 1355-1359
-
-
Gill, S.R.1
Pop, M.2
Deboy, R.T.3
Eckburg, P.B.4
Turnbaugh, P.J.5
Samuel, B.S.6
Gordon, J.I.7
Relman, D.A.8
Fraser-Liggett, C.M.9
Nelson, K.E.10
-
22
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, Nielsen T, Pons N, Levenez F, Yamada T, Mende DR, Li J, Xu J, Li S, Li D, Cao J, Wang B, Liang H, Zheng H, Xie Y, Tap J, Lepage P, Bertalan M, Batto JM, Hansen T, Le Paslier D, Linneberg A, Nielsen HB, Pelletier E, Renault P, et al: A human gut microbial gene catalogue established by metagenomic sequencing. Nature 2010, 464:59-65
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
Nielsen, T.7
Pons, N.8
Levenez, F.9
Yamada, T.10
Mende, D.R.11
Li, J.12
Xu, J.13
Li, S.14
Li, D.15
Cao, J.16
Wang, B.17
Liang, H.18
Zheng, H.19
Xie, Y.20
Tap, J.21
Lepage, P.22
Bertalan, M.23
Batto, J.M.24
Hansen, T.25
Le Paslier, D.26
Linneberg, A.27
Nielsen, H.B.28
Pelletier, E.29
Renault, P.30
more..
-
23
-
-
85027927719
-
Enterotypes of the human gut microbiome
-
Arumugam M, Raes J, Pelletier E, Le Paslier D, Yamada T, Mende DR, Fernandes GR, Tap J, Bruls T, Batto JMM, Bertalan M, Borruel N, Casellas F, Fernandez L, Gautier L, Hansen T, Hattori M, Hayashi T, Kleerebezem M, Kurokawa K, Leclerc M, Levenez F, Manichanh C, Nielsen HB, Nielsen T, Pons N, Poulain J, Qin J, Sicheritz-Ponten T, Tims S, et al: Enterotypes of the human gut microbiome. Nature 2011, 473:174-180
-
(2011)
Nature
, vol.473
, pp. 174-180
-
-
Arumugam, M.1
Raes, J.2
Pelletier, E.3
Le Paslier, D.4
Yamada, T.5
Mende, D.R.6
Fernandes, G.R.7
Tap, J.8
Bruls, T.9
Batto, J.M.M.10
Bertalan, M.11
Borruel, N.12
Casellas, F.13
Fernandez, L.14
Gautier, L.15
Hansen, T.16
Hattori, M.17
Hayashi, T.18
Kleerebezem, M.19
Kurokawa, K.20
Leclerc, M.21
Levenez, F.22
Manichanh, C.23
Nielsen, H.B.24
Nielsen, T.25
Pons, N.26
Poulain, J.27
Qin, J.28
Sicheritz-Ponten, T.29
Tims, S.30
more..
-
24
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
Consortium THMP: Structure, function and diversity of the healthy human microbiome. Nature 2012, 486:207-214
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
Consortium, T.H.M.P.1
-
25
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
Schloss PD, Handelsman J: Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Applied and Environmental Microbiology 2005, 71:1501-1506
-
(2005)
Applied and Environmental Microbiology
, vol.71
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
27
-
-
84864440400
-
Metagenomic microbial community profiling using unique clade-specific marker genes
-
Segata N, Waldron L, Ballarini A, Narasimhan V, Jousson O, Huttenhower C: Metagenomic microbial community profiling using unique clade-specific marker genes. Nature Methods 2012, 9:811-814
-
(2012)
Nature Methods
, vol.9
, pp. 811-814
-
-
Segata, N.1
Waldron, L.2
Ballarini, A.3
Narasimhan, V.4
Jousson, O.5
Huttenhower, C.6
-
28
-
-
84857122937
-
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
-
McDonald D, Price MN, Goodrich J, Nawrocki EP, DeSantis TZ, Probst A, Andersen GL, Knight R, Hugenholtz P: An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. The ISME Journal 2011, 6:610-618
-
(2011)
The ISME Journal
, vol.6
, pp. 610-618
-
-
McDonald, D.1
Price, M.N.2
Goodrich, J.3
Nawrocki, E.P.4
DeSantis, T.Z.5
Probst, A.6
Andersen, G.L.7
Knight, R.8
Hugenholtz, P.9
-
29
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nature Genetics 2000, 25:25-29
-
(2000)
Nature Genetics
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
30
-
-
66449136667
-
ABySS: a parallel assembler for short read sequence data
-
Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJM, Birol I: ABySS: a parallel assembler for short read sequence data. Genome Research 2009, 19:1117-1123
-
(2009)
Genome Research
, vol.19
, pp. 1117-1123
-
-
Simpson, J.T.1
Wong, K.2
Jackman, S.D.3
Schein, J.E.4
Jones, S.J.M.5
Birol, I.6
-
31
-
-
78349238864
-
Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies
-
Boisvert S, Laviolette F, Corbeil J: Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies. Journal of Computational Biology 2010, 17:1519-1533
-
(2010)
Journal of Computational Biology
, vol.17
, pp. 1519-1533
-
-
Boisvert, S.1
Laviolette, F.2
Corbeil, J.3
-
33
-
-
80052549504
-
Integrative analysis of environmental sequences using MEGAN4
-
Huson DH, Mitra S, Ruscheweyh HJ, Weber N, Schuster SC: Integrative analysis of environmental sequences using MEGAN4. Genome Research 2011, 21:1552-1560
-
(2011)
Genome Research
, vol.21
, pp. 1552-1560
-
-
Huson, D.H.1
Mitra, S.2
Ruscheweyh, H.J.3
Weber, N.4
Schuster, S.C.5
-
34
-
-
53549118607
-
The etagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer F, Paarmann D, D'Souza M, Olson R, Glass EM, Kubal M, Paczian T, Rodriguez A, Stevens R, Wilke A, Wilkening J, Edwards RA: The etagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 2008, 9:386-388
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 386-388
-
-
Meyer, F.1
Paarmann, D.2
D'Souza, M.3
Olson, R.4
Glass, E.M.5
Kubal, M.6
Paczian, T.7
Rodriguez, A.8
Stevens, R.9
Wilke, A.10
Wilkening, J.11
Edwards, R.A.12
-
35
-
-
1142306112
-
VEGAN, a package of R functions for community ecology
-
Dixon P: VEGAN, a package of R functions for community ecology. Journal of Vegetation Science 2003, 14:927-930
-
(2003)
Journal of Vegetation Science
, vol.14
, pp. 927-930
-
-
Dixon, P.1
-
36
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R: QIIME allows analysis of high-throughput community sequencing data. Nature Methods 2010, 7:335-336
-
(2010)
Nature Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
37
-
-
42449162998
-
Phylogenetic classification of short environmental DNA fragments
-
Krause L, Diaz NN, Goesmann A, Kelley S, Nattkemper TW, Rohwer F, Edwards RA, Stoye J: Phylogenetic classification of short environmental DNA fragments. Nucleic Acids Research 2008, 36:2230-2239
-
(2008)
Nucleic Acids Research
, vol.36
, pp. 2230-2239
-
-
Krause, L.1
Diaz, N.N.2
Goesmann, A.3
Kelley, S.4
Nattkemper, T.W.5
Rohwer, F.6
Edwards, R.A.7
Stoye, J.8
-
38
-
-
69549135124
-
Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models
-
Brady A, Salzberg SL: Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models. Nature Methods 2009, 6:673-676
-
(2009)
Nature Methods
, vol.6
, pp. 673-676
-
-
Brady, A.1
Salzberg, S.L.2
-
39
-
-
84867397631
-
MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads
-
Namiki T, Hachiya T, Tanaka H, Sakakibara Y: MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads. Nucleic Acids Research 2012, 40:e155
-
(2012)
Nucleic Acids Research
, vol.40
-
-
Namiki, T.1
Hachiya, T.2
Tanaka, H.3
Sakakibara, Y.4
-
40
-
-
79959422558
-
Meta-IDBA: a de novo assembler for metagenomic data
-
Peng Y, Leung HCM, Yiu SM, Chin FYL: Meta-IDBA: a de novo assembler for metagenomic data. Bioinformatics 2011, 27:i94-i101
-
(2011)
Bioinformatics
, vol.27
, pp. 94-101
-
-
Peng, Y.1
Leung, H.C.M.2
Yiu, S.M.3
Chin, F.Y.L.4
-
42
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YYY, Keilbaugh SA, Bewtra M, Knights D, Walters WA, Knight R, Sinha R, Gilroy E, Gupta K, Baldassano R, Nessel L, Li H, Bushman FD, Lewis JD: Linking long-term dietary patterns with gut microbial enterotypes. Science (New York, NY) 2011, 334:105-108
-
(2011)
Science (New York, NY)
, vol.334
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
Bittinger, K.4
Chen, Y.Y.Y.5
Keilbaugh, S.A.6
Bewtra, M.7
Knights, D.8
Walters, W.A.9
Knight, R.10
Sinha, R.11
Gilroy, E.12
Gupta, K.13
Baldassano, R.14
Nessel, L.15
Li, H.16
Bushman, F.D.17
Lewis, J.D.18
-
44
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M, Antonescu C, Salzberg SL: Versatile and open software for comparing large genomes. Genome Biol 2004, 5:R12
-
(2004)
Genome Biol
, vol.5
, pp. R12
-
-
Kurtz, S.1
Phillippy, A.2
Delcher, A.L.3
Smoot, M.4
Shumway, M.5
Antonescu, C.6
Salzberg, S.L.7
-
45
-
-
77955868506
-
Computational solutions to large-scale data management and analysis
-
Schadt EE, Linderman MD, Sorenson J, Lee L, Nolan GP: Computational solutions to large-scale data management and analysis. Nature Reviews Genetics 2010, 11:647-657
-
(2010)
Nature Reviews Genetics
, vol.11
, pp. 647-657
-
-
Schadt, E.E.1
Linderman, M.D.2
Sorenson, J.3
Lee, L.4
Nolan, G.P.5
-
46
-
-
0742305866
-
Network biology: understanding the cell's functional organization
-
Barabasi AL, Oltvai ZN: Network biology: understanding the cell's functional organization. Nature Reviews Genetics 2004, 5:101-113
-
(2004)
Nature Reviews Genetics
, vol.5
, pp. 101-113
-
-
Barabasi, A.L.1
Oltvai, Z.N.2
-
47
-
-
0030805009
-
GenBank
-
Benson DA, Boguski MS, Lipman DJ, Ostell J: GenBank. Nucleic Acids Research 1997, 25:1-6
-
(1997)
Nucleic Acids Research
, vol.25
, pp. 1-6
-
-
Benson, D.A.1
Boguski, M.S.2
Lipman, D.J.3
Ostell, J.4
-
48
-
-
9144233545
-
The EMBL nucleotide sequence database
-
Kulikova T, Aldebert P, Althorpe N, Baker W, Bates K, Browne P, van den Broek A, Cochrane G, Duggan K, Eberhardt R, Faruque N, Garcia-Pastor M, Harte N, Kanz C, Leinonen R, Lin Q, Lombard V, Lopez R, Mancuso R, McHale M, Nardone F, Silventoinen V, Stoehr P, Stoesser G, Ann M, Tzouvara K, Vaughan R, Wu D, Zhu W, Apweiler R: The EMBL nucleotide sequence database. Nucleic Acids Research 2004, 32:D27-30
-
(2004)
Nucleic Acids Research
, vol.32
, pp. D27-D30
-
-
Kulikova, T.1
Aldebert, P.2
Althorpe, N.3
Baker, W.4
Bates, K.5
Browne, P.6
van den Broek, A.7
Cochrane, G.8
Duggan, K.9
Eberhardt, R.10
Faruque, N.11
Garcia-Pastor, M.12
Harte, N.13
Kanz, C.14
Leinonen, R.15
Lin, Q.16
Lombard, V.17
Lopez, R.18
Mancuso, R.19
McHale, M.20
Nardone, F.21
Silventoinen, V.22
Stoehr, P.23
Stoesser, G.24
Ann, M.25
Tzouvara, K.26
Vaughan, R.27
Wu, D.28
Zhu, W.29
Apweiler, R.30
more..
-
49
-
-
9144252016
-
The gene ontology annotation (GOA) database: sharing knowledge in Uniprot with gene ontology
-
Camon E, Magrane M, Barrell D, Lee V, Dimmer E, Maslen J, Binns D, Harte N, Lopez R, Apweiler R: The gene ontology annotation (GOA) database: sharing knowledge in Uniprot with gene ontology. Nucleic Acids Research 2004, 32:D262-266
-
(2004)
Nucleic Acids Research
, vol.32
, pp. D262-D266
-
-
Camon, E.1
Magrane, M.2
Barrell, D.3
Lee, V.4
Dimmer, E.5
Maslen, J.6
Binns, D.7
Harte, N.8
Lopez, R.9
Apweiler, R.10
-
50
-
-
27844562921
-
Open MPI: goals, concept, and design of a next generation MPI implementation recent advances in parallel virtual machine and message massing interface
-
Volume 3241 of Lecture Notes in Computer Science. Volume 2004. Edited by: Kranzlmüller D, Kacsuk P, Dongarra J. Berlin, Heidelberg. Springer Berlin/Heidelberg
-
Gabriel E, Fagg G, Bosilca G, Angskun T, Dongarra J, Squyres J, Sahay V, Kambadur P, Barrett B, Lumsdaine A, Castain R, Daniel D, Graham R, Woodall T, Gabriel E, Fagg GE, Bosilca G, Angskun T, Dongarra JJ, Squyres JM, Sahay V, Kambadur P, Barrett B, Lumsdaine A, Castain RH, Daniel DJ, Graham RL, Woodall TS: Open MPI: goals, concept, and design of a next generation MPI implementation recent advances in parallel virtual machine and message massing interface. In Recent Advances in Parallel Virtual Machine and Message Passing Interface, Volume 3241 of Lecture Notes in Computer Science. Volume 2004. Edited by: Kranzlmüller D, Kacsuk P, Dongarra J. Berlin, Heidelberg. Springer Berlin/Heidelberg; 353-377
-
In Recent Advances in Parallel Virtual Machine and Message Passing Interface
, pp. 353-377
-
-
Gabriel, E.1
Fagg, G.2
Bosilca, G.3
Angskun, T.4
Dongarra, J.5
Squyres, J.6
Sahay, V.7
Kambadur, P.8
Barrett, B.9
Lumsdaine, A.10
Castain, R.11
Daniel, D.12
Graham, R.13
Woodall, T.14
Gabriel, E.15
Fagg, G.E.16
Bosilca, G.17
Angskun, T.18
Dongarra, J.J.19
Squyres, J.M.20
Sahay, V.21
Kambadur, P.22
Barrett, B.23
Lumsdaine, A.24
Castain, R.H.25
Daniel, D.J.26
Graham, R.L.27
Woodall, T.S.28
more..
-
51
-
-
33646153938
-
MPICH2: A new start for MPI implementations
-
Edited by: Kranzlmüller D, Volkert J, Kacsuk P, Dongarra J. Berlin, Heidelberg. Springer Berlin/Heidelberg;
-
Gropp W: MPICH2: A new start for MPI implementations. In Recent Advances in Parallel Virtual Machine and Message Passing Interface, Volume 2474 of Lecture Notes in Computer Science. Edited by: Kranzlmüller D, Volkert J, Kacsuk P, Dongarra J. Berlin, Heidelberg. Springer Berlin/Heidelberg; 2002:37-42
-
(2002)
Recent Advances in Parallel Virtual Machine and Message Passing Interface, Volume 2474 of Lecture Notes in Computer Science
, pp. 37-42
-
-
Gropp, W.1
-
52
-
-
84976817516
-
CHARM++: a portable concurrent object oriented system based on C++
-
OOPSLA '93, New York, NY, USA ACM
-
Kale LV, Krishnan S: CHARM++: a portable concurrent object oriented system based on C++. Proceedings of the 8th Annual Conference on Object-Oriented Programming Systems, Languages, and Applications, OOPSLA '93, New York, NY, USA ACM; 1993, 91-108
-
(1993)
Proceedings of the 8th Annual Conference on Object-Oriented Programming Systems, Languages, and Applications
, pp. 91-108
-
-
Kale, L.V.1
Krishnan, S.2
|