Beware of mis-assembled genomes

Bioinformatics

Volumn 21, Issue 24, 2005, Pages 4320-4321

  Salzberg, Steven L ^a   Yorke, James A ^b  

^a Bldg 142   (United States)

^b UNIVERSITY OF MARYLAND   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG;

AUTOMATION; CHROMATIN ASSEMBLY AND DISASSEMBLY; COMPUTER PROGRAM; DIPLOIDY; DNA FLANKING REGION; DNA SEQUENCE; GENBANK; GENE DELETION; GENE REARRANGEMENT; GENE SEQUENCE; GENETIC DATABASE; HAPLOTYPE; INTERNET; LETTER; MAMMAL; PRIORITY JOURNAL;

MAMMALIA;

EID: 28944439470     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti769     Document Type: Letter

References (10)

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3. Havlak,P. et al. (2004) The Atlas genome assembly system. Genome Res., 14, 721-732.
4. Huang,X. et al. (2003) PCAP: A whole-genome assembly program. Genome Res., 13, 2164-2170.
5. Jaffe,D.B. et al. (2003) Whole-genome sequence assembly for Mammalian genomes: ARACHNE 2. Genome Res., 13, 91-96.
6. Mullikin,J.C. and Ning,Z. (2003) The PHUSION assembler. Genome Res., 13, 81-90.
7. Myers,E.W. et al. (2000) A whole-genome assembly of Drosophila. Science, 287, 2196-2204.
8. Read,T.D. et al. (2002) Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis. Science, 296, 2028-2033.
9. Salzberg,S.L. et al. (2004) The genome assembly archive: A new public resource. PLoS Biol., 2, E285.
10. Schmutz,J. et al. (2004) Quality assessment of the human genome sequence. Nature, 429, 365-368.