Intermolecular G-quadruplex structure-based fluorescent DNA detection system

Biosensors and Bioelectronics

Volumn 41, Issue 1, 2013, Pages 262-267

  Zhou, Hui ^a   Wu, Zai Sheng ^a   Shen, Guo Li ^a   Yu, Ru Qin ^a  

^a HUNAN UNIVERSITY   (China)

Author keywords

Intermolecular G quadruplex; Molecular beacon; Multi donors; Self quenching

Indexed keywords

CLOSE PROXIMITY; DETECTION PROBES; DNA DETECTION; DNA HYBRIDIZATION; FLUORESCENCE SIGNALS; FLUOROGENICS; FUNDAMENTAL RESEARCH; G-QUADRUPLEX STRUCTURE; G-QUADRUPLEXES; GENETIC DISEASE; MOLECULAR BEACON; MULTI-DONORS; OLIGONUCLEOTIDE PROBES; P53 GENE; PROOF OF CONCEPT; SELF-QUENCHING; STRUCTURE-BASED;

DIAGNOSIS; DNA; DYES; OLIGONUCLEOTIDES; PROBES; RESTORATION;

FLUORESCENCE;

DNA FRAGMENT; FLUORESCEIN; OLIGONUCLEOTIDE; GUANINE QUADRUPLEX; DNA;

AMPLITUDE MODULATION; ARTICLE; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; CPG ISLAND; DNA DETERMINATION; DNA HAIRPIN; DNA HYBRIDIZATION; DNA PROBE; DNA SEQUENCE; GENE TARGETING; HYDROGEN BOND; MOLECULAR BEACON; PROCESS DESIGN; SIGNAL NOISE RATIO; TUMOR SUPPRESSOR GENE; CONCEPTUAL FRAMEWORK; DNA STRUCTURE; FLUORESCENCE ANALYSIS; SIGNAL TRANSDUCTION; DNA MICROARRAY; EQUIPMENT; EQUIPMENT DESIGN; EQUIPMENT FAILURE; GENETIC PROCEDURES; GENETICS; INVERTED REPEAT; METHODOLOGY; PILOT STUDY; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; SPECTROFLUOROMETRY;

BIOSENSING TECHNIQUES; DNA; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; G-QUADRUPLEXES; INVERTED REPEAT SEQUENCES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PILOT PROJECTS; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA; SPECTROMETRY, FLUORESCENCE;

EID: 84870832831     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2012.08.028     Document Type: Article

References (43)

1. Aboul-ela F., Murchie A.I., Lilley D.M.J. Nature 1992, 360:280-282.
2. Alberti P., Mergny J.L. Proceedings of the National Academy of Sciences of the United States of America 2003, 100:1569-1573.
3. Cardullo R.A., Agrawal S., Flores C., Zamecnik P.C., Wolf D.E. Proceedings of the National Academy of Sciences of the United States of America 1988, 85:8790-8794.
4. Collie G.W., Haider S.M., Neidle S., Parkinson, G.N. Nucleic Acids Research 2010, 38:5569-5580.
5. Conlon P., Yang C.J., Wu Y.Y., Chen Y., Martinez K., Kim Y.M., Stevens N., Marti A.A., Jockusch S., Turro N.J., Tan W.H. Journal of the American Chemical Society 2008, 130:336-342.
6. Cuppoletti A., Cho Y.J., Park J.S., Strässler C., Kool E.T. Bioconjugate Chemistry 2005, 16:528-534.
7. Daar A.S., Thorsteindottir H., Martin D.K., Smith A.C., Nast S., Singer P.A. Nature Genetics 2002, 32:229-232.
8. Davis J.T. Angewandte Chemie-International Edition 2004, 43:668-698.
9. Dubertret B., Calame M., Libchaber A.J. Nature Biotechnology 2001, 19:365-370.
10. Fang X.H., Li J.W.J., Tan W.H. Analytical Chemistry 2000, 72:3280-3285.
11. Feng K.J., Qiu L.P., Yang Y.F., Wu Z.S., Shen G.L., Yu R.Q. Biosensors and Bioelectronics 2011, 29:66-75.
12. Gothelf K., LaBean T.L. Organic and Biomolecular Chemistry 2005, 3:4023-4037.
13. Grossmann T.N., Roglin L., Seitz O. Angewandte Chemie-International Edition 2007, 46:5223-5225.
14. He F., Tang Y., Yu M., Feng F., An L., Sun H., Wang S., Li Y., Zhu D., Bazan G.C. Journal of the American Chemical Society 2006, 128:6764-6765.
15. Huang Y.C., Sen D. Journal of the American Chemical Society 2010, 132:2663-2671.
16. Kennedy G.C., Matsuzaki H., Dong S.L., Liu W.M., Huang J., Liu G.Y., Xu X., Cao M.Q., Chen W.W., Zhang J., et al. Nature Biotechnology 2003, 21:1233-1237.
17. Knemeyer J.P., Marme N., Sauer M. Analytical Chemistry 2000, 72:3717-3724.
18. Kolpashchikov D.M. Chemical Reviews 2010, 110:4709-4723.
19. Li Z., Mirkin C.A. Journal of the American Chemical Society 2005, 127:11568-11569.
20. Maizels N. Nature Structural Biology 2006, 13:1055-1059.
21. Merkina E.E., Fox K.R. Biophysical Journal 2005, 89:365-373.
22. Morris M.J., Basu S. Biochemistry 2009, 48:5313-5319.
23. Nagatoishi S., Nojima T., Juskowiak B., Takenaka S. Angewandte Chemie-International Edition 2005, 44:5067-5070.
24. Nazarenko I., Pires R., Lowe B., Obaid M., Rashtchian A. Nucleic Acids Research 2002, 30:2089-2195.
25. Nutiu R., Li Y. Journal of the American Chemical Society 2003, 125:4771-4778.
26. Phan A.T., Mergny J.L. Nucleic Acids Research 2002, 30:4618-4625.
27. Qiu L.P., Wu Z.S., Shen G.L., Yu R.Q. Analytical Chemistry 2011, 83:3050-3057.
28. Rosu F., Gabelica V., Poncelet H., Pauw E.D. Nucleic Acids Research 2010, 38:5217-5225.
29. Saiki R.K., Walsh P.S., Levenson C.H., Erlich H.A. Proceedings of the National Academy of Sciences of the United States of America 1989, 86:6230-6234.
30. Sei-Iida Y., Koshimoto H., Kondo S., Tsuji A. Nucleic Acids Research 2000, 28:eE59.
31. Siddiqui-Jain A., Grand C.L., Bearss D., Hurley L.H. Proceedings of the National Academy of Sciences of the United States of America 2002, 99:11593-11598.
32. Stohr K., Häfner B., Nolte O., Wolfrum J., Sauer M., Herten D.P. Analytical Chemistry 2005, 77:7195-7203.
33. Venkatesan N., Seo Y.J., Kim B.H. Chemical Society Reviews 2008, 37:648-663.
34. Wang K.L., You M.X., Chen Y., Han D., Zhu Z., Huang J., Williams K., Yang C.J., Tan W.H. Angewandte Chemie-International Edition 2011, 123:6222-6225.
35. Wang Y.W., Ju J.Y., Carpenter B.A., Atherton J.M., Sensabaugh G.F., Mathies R.A. Analytical Chemistry 1995, 67:1197-1203.
36. Williamson J.R., Raghuraman M.K., Cech T.R. Cell 1989, 59:871-880.
37. Wu Z.S., Hu P., Zhou H., Shen G.L., Yu R.Q. Biomaterials 2010, 31:1918-1924.
38. Xu Y. Chemical Society Reviews 2011, 40:2719-2740.
39. Yang C.J., Pinto M., Schanze K., Tan W.H. Angewandte Chemie-International Edition 2005, 44:2572-2576.
40. Yang C.J., Lin H., Tan W.H. Journal of the American Chemical Society 2005, 127:12772-12773.
41. Yang C.J., Jockusch S., Vicens M., Turro N.J., Tan W.H. Proceedings of the National Academy of Sciences of the United States of America 2005, 102:17278-17283.
42. Zhu C., Wen Y., Li D., Wang L., Song S., Fan C.H., Willner I. Chemistry-A European Journal 2009, 15:11898-11903.
43. Zuo X., Xia F., Xiao Y., Plaxco K.W. Journal of the American Chemical Society 2010, 132:1816-1818.