메뉴 건너뛰기




Volumn 13, Issue 1, 2012, Pages

Population and sex differences in Drosophila melanogaster brain gene expression

Author keywords

Adaptation; Insecticide resistance; Population genetics; Sexual dimorphism; Transcriptomics

Indexed keywords

ARTICLE; BRAIN LEVEL; CONTROLLED STUDY; DETOXIFICATION; DROSOPHILA MELANOGASTER; EVOLUTIONARY ADAPTATION; FEMALE; GENE EXPRESSION; GENETIC ASSOCIATION; GENETIC VARIABILITY; GENOTYPE ENVIRONMENT INTERACTION; HIGH THROUGHPUT SEQUENCING; INSECTICIDE RESISTANCE; MALE; NONHUMAN; NUCLEOTIDE SEQUENCE; POPULATION GENETICS; RNA SEQUENCE; SEX DIFFERENCE; SMELLING; TRANSPOSON; X CHROMOSOME;

EID: 84869204665     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-654     Document Type: Article
Times cited : (73)

References (76)
  • 1
    • 0023998356 scopus 로고
    • Genetic variation of Drosophila melanogaster natural populations
    • 10.1016/0168-9525(88)90098-4, 3149056
    • David JR, Capy P. Genetic variation of Drosophila melanogaster natural populations. Trends Genet 1988, 4:106-111. 10.1016/0168-9525(88)90098-4, 3149056.
    • (1988) Trends Genet , vol.4 , pp. 106-111
    • David, J.R.1    Capy, P.2
  • 2
    • 1842575602 scopus 로고    scopus 로고
    • How two Afrotropical endemics made two cosmopolitan human commensals: the Drosophila melanogaster-D. simulans palaeogeographic riddle
    • Lachaise D, Silvain JF. How two Afrotropical endemics made two cosmopolitan human commensals: the Drosophila melanogaster-D. simulans palaeogeographic riddle. Genetica 2004, 120:17-39.
    • (2004) Genetica , vol.120 , pp. 17-39
    • Lachaise, D.1    Silvain, J.F.2
  • 3
    • 22344444998 scopus 로고    scopus 로고
    • Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations
    • 10.1101/gr.3541005, 1142469, 15930491
    • Haddrill PR, Thornton KR, Charlesworth B, Andolfatto P. Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations. Genome Res 2005, 15:790-799. 10.1101/gr.3541005, 1142469, 15930491.
    • (2005) Genome Res , vol.15 , pp. 790-799
    • Haddrill, P.R.1    Thornton, K.R.2    Charlesworth, B.3    Andolfatto, P.4
  • 4
    • 24744465216 scopus 로고    scopus 로고
    • Inferring the effects of demography and selection on Drosophila melanogaster populations from a chromosome-wide scan of DNA variation
    • 10.1093/molbev/msi207, 15987874
    • Ometto L, Glinka S, De Lorenzo D, Stephan W. Inferring the effects of demography and selection on Drosophila melanogaster populations from a chromosome-wide scan of DNA variation. Mol Biol Evol 2005, 22:2119-2130. 10.1093/molbev/msi207, 15987874.
    • (2005) Mol Biol Evol , vol.22 , pp. 2119-2130
    • Ometto, L.1    Glinka, S.2    De Lorenzo, D.3    Stephan, W.4
  • 5
    • 33644763127 scopus 로고    scopus 로고
    • Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster
    • 1456302, 16299396
    • Thornton K, Andolfatto P. Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster. Genetics 2006, 172:1607-1619. 1456302, 16299396.
    • (2006) Genetics , vol.172 , pp. 1607-1619
    • Thornton, K.1    Andolfatto, P.2
  • 6
    • 33846589670 scopus 로고    scopus 로고
    • The recent demographic and adaptive history of Drosophila melanogaster
    • 10.1038/sj.hdy.6800901, 17006533
    • Stephan W, Li H. The recent demographic and adaptive history of Drosophila melanogaster. Heredity 2007, 98:65-68. 10.1038/sj.hdy.6800901, 17006533.
    • (2007) Heredity , vol.98 , pp. 65-68
    • Stephan, W.1    Li, H.2
  • 7
    • 0036790812 scopus 로고    scopus 로고
    • Hitchhiking mapping: a population-based fine-mapping strategy for adaptive mutations in Drosophila melanogaster
    • 10.1073/pnas.202336899, 130566, 12351680
    • Harr B, Kauer M, Schlötterer C. Hitchhiking mapping: a population-based fine-mapping strategy for adaptive mutations in Drosophila melanogaster. Proc Natl Acad Sci USA 2002, 99:12949-12954. 10.1073/pnas.202336899, 130566, 12351680.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 12949-12954
    • Harr, B.1    Kauer, M.2    Schlötterer, C.3
  • 8
    • 0347065347 scopus 로고    scopus 로고
    • Demography and natural selection have shaped genetic variation in Drosophila melanogaster: a multi-locus approach
    • 1462856, 14668381
    • Glinka S, Ometto L, Mousset S, Stephan W, De Lorenzo D. Demography and natural selection have shaped genetic variation in Drosophila melanogaster: a multi-locus approach. Genetics 2003, 165:1269-1278. 1462856, 14668381.
    • (2003) Genetics , vol.165 , pp. 1269-1278
    • Glinka, S.1    Ometto, L.2    Mousset, S.3    Stephan, W.4    De Lorenzo, D.5
  • 9
    • 33750491918 scopus 로고    scopus 로고
    • Inferring the demographic history and rate of adaptive substitution in Drosophila
    • 10.1371/journal.pgen.0020166, 1599771, 17040129
    • Li H, Stephan W. Inferring the demographic history and rate of adaptive substitution in Drosophila. PLoS Genet 2006, 2:e166. 10.1371/journal.pgen.0020166, 1599771, 17040129.
    • (2006) PLoS Genet , vol.2
    • Li, H.1    Stephan, W.2
  • 10
    • 35048822011 scopus 로고    scopus 로고
    • Distinctly different sex ratios in African and European populations of Drosophila melanogaster inferred from chromosomewide single nucleotide polymorphism data
    • 10.1534/genetics.107.074922, 2013676, 17660560
    • Hutter S, Li H, Beisswanger S, De Lorenzo D, Stephan W. Distinctly different sex ratios in African and European populations of Drosophila melanogaster inferred from chromosomewide single nucleotide polymorphism data. Genetics 2007, 177:469-480. 10.1534/genetics.107.074922, 2013676, 17660560.
    • (2007) Genetics , vol.177 , pp. 469-480
    • Hutter, S.1    Li, H.2    Beisswanger, S.3    De Lorenzo, D.4    Stephan, W.5
  • 11
    • 54949129791 scopus 로고    scopus 로고
    • High rate of recent transposable element-induced adaptation in Drosophila melanogaster
    • 10.1371/journal.pbio.0060251, 2570423, 18942889
    • González J, Lenkov K, Lipatov M, Macpherson JM, Petrov DA. High rate of recent transposable element-induced adaptation in Drosophila melanogaster. PLoS Biol 2008, 6:e251. 10.1371/journal.pbio.0060251, 2570423, 18942889.
    • (2008) PLoS Biol , vol.6
    • González, J.1    Lenkov, K.2    Lipatov, M.3    Macpherson, J.M.4    Petrov, D.A.5
  • 12
    • 77952410170 scopus 로고    scopus 로고
    • Genome-wide patterns of adaptation to temperate environments associated with transposable elements in Drosophila
    • 10.1371/journal.pgen.1000905, 2851572, 20386746
    • González J, Karasov TL, Messer PW, Petrov DA. Genome-wide patterns of adaptation to temperate environments associated with transposable elements in Drosophila. PLoS Genet 2010, 6:e1000905. 10.1371/journal.pgen.1000905, 2851572, 20386746.
    • (2010) PLoS Genet , vol.6
    • González, J.1    Karasov, T.L.2    Messer, P.W.3    Petrov, D.A.4
  • 13
    • 0016669094 scopus 로고
    • Evolution at two levels in humans and chimpanzees
    • 10.1126/science.1090005, 1090005
    • King MC, Wilson AC. Evolution at two levels in humans and chimpanzees. Science 1975, 188:107-116. 10.1126/science.1090005, 1090005.
    • (1975) Science , vol.188 , pp. 107-116
    • King, M.C.1    Wilson, A.C.2
  • 15
    • 33645524495 scopus 로고    scopus 로고
    • Variation within and among species in gene expression: raw material for evolution
    • 10.1111/j.1365-294X.2006.02868.x, 16626448
    • Whitehead A, Crawford DL. Variation within and among species in gene expression: raw material for evolution. Mol Ecol 2006, 15:1197-1211. 10.1111/j.1365-294X.2006.02868.x, 16626448.
    • (2006) Mol Ecol , vol.15 , pp. 1197-1211
    • Whitehead, A.1    Crawford, D.L.2
  • 16
    • 33847057226 scopus 로고    scopus 로고
    • The evolutionary significance of cis-regulatory mutations
    • Wray GA. The evolutionary significance of cis-regulatory mutations. Nat Rev Genet 2007, 8:206-216.
    • (2007) Nat Rev Genet , vol.8 , pp. 206-216
    • Wray, G.A.1
  • 17
    • 0042692890 scopus 로고    scopus 로고
    • Rapid evolution of male-biased gene expression in Drosophila
    • 10.1073/pnas.1630690100, 188344, 12907700
    • Meiklejohn CD, Parsch J, Ranz JM, Hartl DL. Rapid evolution of male-biased gene expression in Drosophila. Proc Natl Acad Sci USA 2003, 100:9894-9899. 10.1073/pnas.1630690100, 188344, 12907700.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 9894-9899
    • Meiklejohn, C.D.1    Parsch, J.2    Ranz, J.M.3    Hartl, D.L.4
  • 18
    • 46249106059 scopus 로고    scopus 로고
    • Gene expression variation in African and European populations of Drosophila melanogaster
    • 10.1186/gb-2008-9-1-r12, 2395247, 18208589
    • Hutter S, Saminadin-Peter SS, Stephan W, Parsch J. Gene expression variation in African and European populations of Drosophila melanogaster. Genome Biol 2008, 9:R12. 10.1186/gb-2008-9-1-r12, 2395247, 18208589.
    • (2008) Genome Biol , vol.9
    • Hutter, S.1    Saminadin-Peter, S.S.2    Stephan, W.3    Parsch, J.4
  • 20
    • 79955142870 scopus 로고    scopus 로고
    • Population transcriptomics: insights from Drosophila simulans, Drosophila sechellia and their hybrids
    • 10.1007/s10709-011-9566-0, 21424276
    • Wurmser F, Ogereau D, Mary-Huard T, Loriod B, Joly D, Montchamp-Moreau C. Population transcriptomics: insights from Drosophila simulans, Drosophila sechellia and their hybrids. Genetica 2011, 139:465-477. 10.1007/s10709-011-9566-0, 21424276.
    • (2011) Genetica , vol.139 , pp. 465-477
    • Wurmser, F.1    Ogereau, D.2    Mary-Huard, T.3    Loriod, B.4    Joly, D.5    Montchamp-Moreau, C.6
  • 21
    • 34548013932 scopus 로고    scopus 로고
    • The evolution of sex-biased genes and sex-biased gene expression
    • 10.1038/nrg2167, 17680007
    • Ellegren H, Parsch J. The evolution of sex-biased genes and sex-biased gene expression. Nat Rev Genet 2007, 8:689-698. 10.1038/nrg2167, 17680007.
    • (2007) Nat Rev Genet , vol.8 , pp. 689-698
    • Ellegren, H.1    Parsch, J.2
  • 22
    • 0346460960 scopus 로고    scopus 로고
    • Paucity of genes on the Drosophila X chromosome showing male-biased expression
    • 10.1126/science.1079190, 1363366, 12511656
    • Parisi M, Nuttall R, Naiman D, Bouffard G, Malley J, Andrews J, Eastman S, Oliver B. Paucity of genes on the Drosophila X chromosome showing male-biased expression. Science 2003, 299:697-700. 10.1126/science.1079190, 1363366, 12511656.
    • (2003) Science , vol.299 , pp. 697-700
    • Parisi, M.1    Nuttall, R.2    Naiman, D.3    Bouffard, G.4    Malley, J.5    Andrews, J.6    Eastman, S.7    Oliver, B.8
  • 23
    • 34548805778 scopus 로고    scopus 로고
    • Natural polymorphism affecting learning and memory in Drosophila
    • 10.1073/pnas.0702923104, 1941815, 17640898
    • Mery F, Belay AT, So AK-C, Sokolowski MB, Kawecki TJ. Natural polymorphism affecting learning and memory in Drosophila. Proc Natl Acad Sci USA 2007, 104:13051-13055. 10.1073/pnas.0702923104, 1941815, 17640898.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 13051-13055
    • Mery, F.1    Belay, A.T.2    So, A.K.-C.3    Sokolowski, M.B.4    Kawecki, T.J.5
  • 24
    • 24944530347 scopus 로고    scopus 로고
    • Candidate gustatory interneurons modulating feeding behavior in the Drosophila brain
    • 10.1371/journal.pbio.0030305, 1193519, 16122349
    • Melcher C, Pankratz MJ. Candidate gustatory interneurons modulating feeding behavior in the Drosophila brain. PLoS Biol 2005, 3:e305. 10.1371/journal.pbio.0030305, 1193519, 16122349.
    • (2005) PLoS Biol , vol.3
    • Melcher, C.1    Pankratz, M.J.2
  • 26
    • 40849137833 scopus 로고    scopus 로고
    • Photoperiodic induction of diapause requires regulated transcription of timeless in the larval brain of Chymomyza costata
    • 10.1177/0748730407313364, 18375862
    • Stehlík J, Závodská R, Shimada K, Sauman I, Kostál V. Photoperiodic induction of diapause requires regulated transcription of timeless in the larval brain of Chymomyza costata. J Biol Rhythms 2008, 23:129-139. 10.1177/0748730407313364, 18375862.
    • (2008) J Biol Rhythms , vol.23 , pp. 129-139
    • Stehlík, J.1    Závodská, R.2    Shimada, K.3    Sauman, I.4    Kostál, V.5
  • 27
    • 7644232462 scopus 로고    scopus 로고
    • Quantitative genetic analyses of complex behaviours in Drosophila
    • 10.1038/nrg1472, 15520793
    • Anholt RR, Mackay TF. Quantitative genetic analyses of complex behaviours in Drosophila. Nat Rev Genet 2004, 5:838-849. 10.1038/nrg1472, 15520793.
    • (2004) Nat Rev Genet , vol.5 , pp. 838-849
    • Anholt, R.R.1    Mackay, T.F.2
  • 28
    • 84870218130 scopus 로고    scopus 로고
    • Genetics of aggression
    • 10.1146/annurev-genet-110711-155514, 22934647
    • Anholt RR, Mackay TF. Genetics of aggression. Annu Rev Genet 2012, 46:145-164. 10.1146/annurev-genet-110711-155514, 22934647.
    • (2012) Annu Rev Genet , vol.46 , pp. 145-164
    • Anholt, R.R.1    Mackay, T.F.2
  • 29
    • 84860332776 scopus 로고    scopus 로고
    • FlyBase 101-the basics of navigating FlyBase
    • FlyBase Consortium
    • McQuilton P, St Pierre SE, Thurmond J, FlyBase Consortium FlyBase 101-the basics of navigating FlyBase. Nucleic Acids Res 2012, 40:706-714. FlyBase Consortium.
    • (2012) Nucleic Acids Res , vol.40 , pp. 706-714
    • McQuilton, P.1    St Pierre, S.E.2    Thurmond, J.3
  • 30
    • 33749859791 scopus 로고    scopus 로고
    • Sebida: a database for the functional and evolutionary analysis of genes with sex-biased expression
    • 10.1093/bioinformatics/btl422, 16882652
    • Gnad F, Parsch J. Sebida: a database for the functional and evolutionary analysis of genes with sex-biased expression. Bioinformatics 2006, 22:2577-2579. 10.1093/bioinformatics/btl422, 16882652.
    • (2006) Bioinformatics , vol.22 , pp. 2577-2579
    • Gnad, F.1    Parsch, J.2
  • 32
    • 79960559081 scopus 로고    scopus 로고
    • Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing
    • 10.1186/1471-2164-12-364, 3152543, 21756339
    • Chang PL, Dunham JP, Nuzhdin SV, Arbeitman MN. Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing. BMC Genomics 2011, 12:364. 10.1186/1471-2164-12-364, 3152543, 21756339.
    • (2011) BMC Genomics , vol.12 , pp. 364
    • Chang, P.L.1    Dunham, J.P.2    Nuzhdin, S.V.3    Arbeitman, M.N.4
  • 33
    • 33645530936 scopus 로고    scopus 로고
    • High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome
    • 10.1101/gad.1400206, 1472287, 16547173
    • Alekseyenko AA, Larschan E, Lai WR, Park PJ, Kuroda MI. High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome. Genes Dev 2006, 20:848-857. 10.1101/gad.1400206, 1472287, 16547173.
    • (2006) Genes Dev , vol.20 , pp. 848-857
    • Alekseyenko, A.A.1    Larschan, E.2    Lai, W.R.3    Park, P.J.4    Kuroda, M.I.5
  • 34
    • 23044509495 scopus 로고    scopus 로고
    • Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila
    • 10.1126/science.1112699, 16051794
    • Aminetzach YT, Macpherson JM, Petrov DA. Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila. Science 2005, 309:764-767. 10.1126/science.1112699, 16051794.
    • (2005) Science , vol.309 , pp. 764-767
    • Aminetzach, Y.T.1    Macpherson, J.M.2    Petrov, D.A.3
  • 35
    • 52049084856 scopus 로고    scopus 로고
    • Genomic analysis of adaptive differentiation in Drosophila melanogaster
    • 10.1534/genetics.107.083659, 2390623, 18493064
    • Turner TL, Levine MT, Eckert ML, Begun DJ. Genomic analysis of adaptive differentiation in Drosophila melanogaster. Genetics 2008, 179:455-473. 10.1534/genetics.107.083659, 2390623, 18493064.
    • (2008) Genetics , vol.179 , pp. 455-473
    • Turner, T.L.1    Levine, M.T.2    Eckert, M.L.3    Begun, D.J.4
  • 36
    • 82055186780 scopus 로고    scopus 로고
    • Divergent transcriptomic responses to repeated and single cold exposures in Drosophila melanogaster
    • 10.1242/jeb.059535, 22071194
    • Zhang J, Marshall KE, Westwood JT, Clark MS, Sinclair BJ. Divergent transcriptomic responses to repeated and single cold exposures in Drosophila melanogaster. J Exp Biol 2011, 214:4021-4029. 10.1242/jeb.059535, 22071194.
    • (2011) J Exp Biol , vol.214 , pp. 4021-4029
    • Zhang, J.1    Marshall, K.E.2    Westwood, J.T.3    Clark, M.S.4    Sinclair, B.J.5
  • 37
    • 80052051107 scopus 로고    scopus 로고
    • Differential expression of small heat shock protein genes Hsp23 and Hsp40, and heat shock gene Hsr-omega in fruit flies (Drosophila melanogaster) along a microclimatic gradient
    • 10.1093/jhered/esr027, 21505045
    • Carmel J, Rashkovetsky E, Nevo E, Korol A. Differential expression of small heat shock protein genes Hsp23 and Hsp40, and heat shock gene Hsr-omega in fruit flies (Drosophila melanogaster) along a microclimatic gradient. J Hered 2011, 102:593-603. 10.1093/jhered/esr027, 21505045.
    • (2011) J Hered , vol.102 , pp. 593-603
    • Carmel, J.1    Rashkovetsky, E.2    Nevo, E.3    Korol, A.4
  • 38
    • 73649113518 scopus 로고    scopus 로고
    • Temporal expression of heat shock genes during cold stress and recovery from chill coma in adult Drosophila melanogaster
    • 10.1111/j.1742-4658.2009.07470.x, 19968716
    • Colinet H, Lee SF, Hoffmann A. Temporal expression of heat shock genes during cold stress and recovery from chill coma in adult Drosophila melanogaster. FEBS J 2010, 277:174-185. 10.1111/j.1742-4658.2009.07470.x, 19968716.
    • (2010) FEBS J , vol.277 , pp. 174-185
    • Colinet, H.1    Lee, S.F.2    Hoffmann, A.3
  • 39
    • 78751669353 scopus 로고    scopus 로고
    • Identification of X-linked quantitative trait loci affecting cold tolerance in Drosophila melanogaster and fine mapping by selective sweep analysis
    • Svetec N, Werzner A, Wilches R, Pavlidis P, Alvarez-Castro JM, Broman KW, Metzler D, Stephan W. Identification of X-linked quantitative trait loci affecting cold tolerance in Drosophila melanogaster and fine mapping by selective sweep analysis. Mol Ecol 2010, 20:530-544.
    • (2010) Mol Ecol , vol.20 , pp. 530-544
    • Svetec, N.1    Werzner, A.2    Wilches, R.3    Pavlidis, P.4    Alvarez-Castro, J.M.5    Broman, K.W.6    Metzler, D.7    Stephan, W.8
  • 40
    • 0034817068 scopus 로고    scopus 로고
    • A family of turandot-related genes in the humoral stress response of Drosophila
    • 10.1006/bbrc.2001.5067, 11409894
    • Ekengren S, Hultmark D. A family of turandot-related genes in the humoral stress response of Drosophila. Biochem Biophys Res Commun 2001, 284:998-1003. 10.1006/bbrc.2001.5067, 11409894.
    • (2001) Biochem Biophys Res Commun , vol.284 , pp. 998-1003
    • Ekengren, S.1    Hultmark, D.2
  • 41
    • 12344262334 scopus 로고    scopus 로고
    • Drosophila OBP LUSH is required for activity of pheromone-sensitive neurons
    • 10.1016/j.neuron.2004.12.031, 15664171
    • Xu P, Atkinson R, Jones DNM, Smith DP. Drosophila OBP LUSH is required for activity of pheromone-sensitive neurons. Neuron 2005, 45:193-200. 10.1016/j.neuron.2004.12.031, 15664171.
    • (2005) Neuron , vol.45 , pp. 193-200
    • Xu, P.1    Atkinson, R.2    Jones, D.N.M.3    Smith, D.P.4
  • 42
    • 33748251281 scopus 로고    scopus 로고
    • A pheromone receptor mediates 11-cis-vaccenyl acetate-induced responses in Drosophila
    • 10.1523/JNEUROSCI.0876-06.2006, 16928861
    • Ha TS, Smith DP. A pheromone receptor mediates 11-cis-vaccenyl acetate-induced responses in Drosophila. J Neurosci 2006, 26:8727-8733. 10.1523/JNEUROSCI.0876-06.2006, 16928861.
    • (2006) J Neurosci , vol.26 , pp. 8727-8733
    • Ha, T.S.1    Smith, D.P.2
  • 43
    • 74449084647 scopus 로고    scopus 로고
    • Identification of an aggression-promoting pheromone and its receptor neurons in Drosophila
    • 10.1038/nature08678, 2999963, 19966787
    • Wang L, Anderson DJ. Identification of an aggression-promoting pheromone and its receptor neurons in Drosophila. Nature 2010, 463:227-231. 10.1038/nature08678, 2999963, 19966787.
    • (2010) Nature , vol.463 , pp. 227-231
    • Wang, L.1    Anderson, D.J.2
  • 44
    • 33947682707 scopus 로고    scopus 로고
    • Receptors and neurons for fly odors in Drosophila
    • 10.1016/j.cub.2007.02.043, 1876700, 17363256
    • Van Der Goes Van Naters W, Carlson JR. Receptors and neurons for fly odors in Drosophila. Curr Biol 2007, 17:606-612. 10.1016/j.cub.2007.02.043, 1876700, 17363256.
    • (2007) Curr Biol , vol.17 , pp. 606-612
    • Van Der Goes Van Naters, W.1    Carlson, J.R.2
  • 46
    • 3843073210 scopus 로고    scopus 로고
    • Linkage disequilibrium as a signature of selective sweeps
    • 10.1534/genetics.103.025387, 1470945, 15280259
    • Kim Y, Nielsen R. Linkage disequilibrium as a signature of selective sweeps. Genetics 2004, 167:1513-1524. 10.1534/genetics.103.025387, 1470945, 15280259.
    • (2004) Genetics , vol.167 , pp. 1513-1524
    • Kim, Y.1    Nielsen, R.2
  • 47
    • 84865553595 scopus 로고    scopus 로고
    • OmegaPlus: A scalable tool for rapid detection of selective sweeps in whole-genome datasets
    • 10.1093/bioinformatics/bts419, 22760304
    • Alachiotis N, Stamatakis A, Pavlidis P. OmegaPlus: A scalable tool for rapid detection of selective sweeps in whole-genome datasets. Bioinformatics 2012, 28:2274-2275. 10.1093/bioinformatics/bts419, 22760304.
    • (2012) Bioinformatics , vol.28 , pp. 2274-2275
    • Alachiotis, N.1    Stamatakis, A.2    Pavlidis, P.3
  • 48
    • 79959478938 scopus 로고    scopus 로고
    • Approximate Bayesian analysis of Drosophila melanogaster polymorphism data reveals a recent colonization of Southeast Asia
    • 10.1093/molbev/msr031, 21300986
    • Laurent SJ, Werzner A, Excoffier L, Stephan W. Approximate Bayesian analysis of Drosophila melanogaster polymorphism data reveals a recent colonization of Southeast Asia. Mol Biol Evol 2011, 28:2041-2051. 10.1093/molbev/msr031, 21300986.
    • (2011) Mol Biol Evol , vol.28 , pp. 2041-2051
    • Laurent, S.J.1    Werzner, A.2    Excoffier, L.3    Stephan, W.4
  • 49
    • 34247854158 scopus 로고    scopus 로고
    • Cis-regulatory elements in the Accord retrotransposon result in tissue-specific expression of the Drosophila melanogaster insecticide resistance gene Cyp6g1
    • 1840086, 17179088
    • Chung H, Bogwitz MR, McCart C, Andrianopoulos A, ffrench-Constant RH, Batterham P, Daborn PJ. Cis-regulatory elements in the Accord retrotransposon result in tissue-specific expression of the Drosophila melanogaster insecticide resistance gene Cyp6g1. Genetics 2007, 175:1071-1077. 1840086, 17179088.
    • (2007) Genetics , vol.175 , pp. 1071-1077
    • Chung, H.1    Bogwitz, M.R.2    McCart, C.3    Andrianopoulos, A.4    ffrench-Constant, R.H.5    Batterham, P.6    Daborn, P.J.7
  • 50
    • 84858379682 scopus 로고    scopus 로고
    • Selective sweep of a cis-regulatory sequence in a non-African population of Drosophila melanogaster
    • 10.1093/molbev/msr284, 22101416
    • Saminadin-Peter SS, Kemkemer C, Pavlidis P, Parsch J. Selective sweep of a cis-regulatory sequence in a non-African population of Drosophila melanogaster. Mol Biol Evol 2012, 29:1167-1174. 10.1093/molbev/msr284, 22101416.
    • (2012) Mol Biol Evol , vol.29 , pp. 1167-1174
    • Saminadin-Peter, S.S.1    Kemkemer, C.2    Pavlidis, P.3    Parsch, J.4
  • 51
    • 34249804498 scopus 로고    scopus 로고
    • Using FlyAtlas to identify better Drosophila melanogaster models of human disease
    • 10.1038/ng2049, 17534367
    • Chintapalli VR, Wang J, Dow JA. Using FlyAtlas to identify better Drosophila melanogaster models of human disease. Nat Genet 2007, 39:715-720. 10.1038/ng2049, 17534367.
    • (2007) Nat Genet , vol.39 , pp. 715-720
    • Chintapalli, V.R.1    Wang, J.2    Dow, J.A.3
  • 52
    • 80055085714 scopus 로고    scopus 로고
    • Successive increases in the resistance of Drosophila to viral infection through a transposon insertion followed by a duplication
    • 10.1371/journal.pgen.1002337, 3197678, 22028673
    • Magwire MM, Bayer F, Webster CL, Cao C, Jiggins FM. Successive increases in the resistance of Drosophila to viral infection through a transposon insertion followed by a duplication. PLoS Genet 2011, 7:e1002337. 10.1371/journal.pgen.1002337, 3197678, 22028673.
    • (2011) PLoS Genet , vol.7
    • Magwire, M.M.1    Bayer, F.2    Webster, C.L.3    Cao, C.4    Jiggins, F.M.5
  • 53
    • 84866144893 scopus 로고    scopus 로고
    • Brain transcriptome variation among behaviorally distinct strains of zebrafish (Danio rerio)
    • 10.1186/1471-2164-13-323, 3434030, 22817472
    • Drew RE, Settles ML, Churchill EJ, Williams SM, Balli S, Robison BD. Brain transcriptome variation among behaviorally distinct strains of zebrafish (Danio rerio). BMC Genomics 2012, 13:323. 10.1186/1471-2164-13-323, 3434030, 22817472.
    • (2012) BMC Genomics , vol.13 , pp. 323
    • Drew, R.E.1    Settles, M.L.2    Churchill, E.J.3    Williams, S.M.4    Balli, S.5    Robison, B.D.6
  • 55
    • 0141958956 scopus 로고    scopus 로고
    • Gene expression profiles in the brain predict behavior in individual honey bees
    • 10.1126/science.1086807, 14551438
    • Whitfield CW, Cziko A-M, Robinson GE. Gene expression profiles in the brain predict behavior in individual honey bees. Science 2003, 302:296-299. 10.1126/science.1086807, 14551438.
    • (2003) Science , vol.302 , pp. 296-299
    • Whitfield, C.W.1    Cziko, A.-M.2    Robinson, G.E.3
  • 56
    • 26244465278 scopus 로고    scopus 로고
    • Alternative life histories shape brain gene expression profiles in males of the same population
    • 10.1098/rspb.2005.3125, 1559854, 16087419
    • Aubin-Horth N, Landry CR, Letcher BH, Hofmann HA. Alternative life histories shape brain gene expression profiles in males of the same population. Proc Biol Sci 2005, 272:1655-1662. 10.1098/rspb.2005.3125, 1559854, 16087419.
    • (2005) Proc Biol Sci , vol.272 , pp. 1655-1662
    • Aubin-Horth, N.1    Landry, C.R.2    Letcher, B.H.3    Hofmann, H.A.4
  • 57
    • 0037504137 scopus 로고    scopus 로고
    • Sex-dependent gene expression and evolution of the Drosophila transcriptome
    • 10.1126/science.1085881, 12805547
    • Ranz JM, Castillo-Davis CI, Meiklejohn CD, Hartl DL. Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science 2003, 300:1742-1745. 10.1126/science.1085881, 12805547.
    • (2003) Science , vol.300 , pp. 1742-1745
    • Ranz, J.M.1    Castillo-Davis, C.I.2    Meiklejohn, C.D.3    Hartl, D.L.4
  • 58
    • 37349030405 scopus 로고    scopus 로고
    • Genomic and functional studies of Drosophila sex hierarchy regulated gene expression in adult head and nervous system tissues
    • 10.1371/journal.pgen.0030216, 2082469, 18039034
    • Goldman TD, Arbeitman MN. Genomic and functional studies of Drosophila sex hierarchy regulated gene expression in adult head and nervous system tissues. PLoS Genet 2007, 3:e216. 10.1371/journal.pgen.0030216, 2082469, 18039034.
    • (2007) PLoS Genet , vol.3
    • Goldman, T.D.1    Arbeitman, M.N.2
  • 60
    • 84863550891 scopus 로고    scopus 로고
    • Disentangling the relationship between sex-biased gene expression and X-linkage
    • 10.1101/gr.132100.111, 22499666
    • Meisel RP, Malone JH, Clark AG. Disentangling the relationship between sex-biased gene expression and X-linkage. Genome Res 2012, 22:1255-1265. 10.1101/gr.132100.111, 22499666.
    • (2012) Genome Res , vol.22 , pp. 1255-1265
    • Meisel, R.P.1    Malone, J.H.2    Clark, A.G.3
  • 61
    • 77957854239 scopus 로고    scopus 로고
    • Dosage compensation and demasculinization of X chromosomes in Drosophila
    • 10.1016/j.cub.2010.06.076, 20705467
    • Bachtrog D, Toda NR, Lockton S. Dosage compensation and demasculinization of X chromosomes in Drosophila. Curr Biol 2010, 20:1476-1481. 10.1016/j.cub.2010.06.076, 20705467.
    • (2010) Curr Biol , vol.20 , pp. 1476-1481
    • Bachtrog, D.1    Toda, N.R.2    Lockton, S.3
  • 62
    • 0021554565 scopus 로고
    • Sex chromosomes and the evolution of sexual dimorphism
    • Rice WR. Sex chromosomes and the evolution of sexual dimorphism. Evolution 1984, 38:735-742.
    • (1984) Evolution , vol.38 , pp. 735-742
    • Rice, W.R.1
  • 63
    • 0023501735 scopus 로고
    • The relative rates of evolution of sex chromosomes and autosomes
    • Charlesworth B, Coyne JA, Barton NH. The relative rates of evolution of sex chromosomes and autosomes. Am Nat 1987, 130:113-146.
    • (1987) Am Nat , vol.130 , pp. 113-146
    • Charlesworth, B.1    Coyne, J.A.2    Barton, N.H.3
  • 64
    • 34248581741 scopus 로고    scopus 로고
    • Maintaining a behaviour polymorphism by frequency-dependent selection on a single gene
    • 10.1038/nature05764, 17495926
    • Fitzpatrick MJ, Feder E, Rowe L, Sokolowski MB. Maintaining a behaviour polymorphism by frequency-dependent selection on a single gene. Nature 2007, 447:210-212. 10.1038/nature05764, 17495926.
    • (2007) Nature , vol.447 , pp. 210-212
    • Fitzpatrick, M.J.1    Feder, E.2    Rowe, L.3    Sokolowski, M.B.4
  • 65
    • 77952721141 scopus 로고    scopus 로고
    • A brain-specific cytochrome P450 responsible for the majority of deltamethrin resistance in the QTC279 strain of Tribolium castaneum
    • 10.1073/pnas.1000059107, 2889294, 20410462
    • Zhu F, Parthasarathy R, Bai H, Woithe K, Kaussmann M, Nauen R, Harrison DA, Palli SR. A brain-specific cytochrome P450 responsible for the majority of deltamethrin resistance in the QTC279 strain of Tribolium castaneum. Proc Natl Acad Sci USA 2010, 107:8557-8562. 10.1073/pnas.1000059107, 2889294, 20410462.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 8557-8562
    • Zhu, F.1    Parthasarathy, R.2    Bai, H.3    Woithe, K.4    Kaussmann, M.5    Nauen, R.6    Harrison, D.A.7    Palli, S.R.8
  • 66
    • 0031600133 scopus 로고    scopus 로고
    • CYP6D1 protects thoracic ganglia of houseflies from the neurotoxic insecticide cypermethrin
    • 10.1002/(SICI)1520-6327(1998)37:1<57::AID-ARCH7>3.0.CO;2-S, 9397514
    • Korytko PJ, Scott JG. CYP6D1 protects thoracic ganglia of houseflies from the neurotoxic insecticide cypermethrin. Arch Insect Biochem Physiol. 1998, 37:57-63. 10.1002/(SICI)1520-6327(1998)37:1<57::AID-ARCH7>3.0.CO;2-S, 9397514.
    • (1998) Arch Insect Biochem Physiol. , vol.37 , pp. 57-63
    • Korytko, P.J.1    Scott, J.G.2
  • 67
    • 84871131185 scopus 로고    scopus 로고
    • Drosophila Population Genomics Project
    • Drosophila Population Genomics Project http://www.dpgp.org, Drosophila Population Genomics Project.
  • 68
    • 79956307251 scopus 로고    scopus 로고
    • Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads
    • 10.1101/gr.111120.110, 3106326, 20980556
    • Lunter G, Goodson M. Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads. Genome Res 2011, 21:936-939. 10.1101/gr.111120.110, 3106326, 20980556.
    • (2011) Genome Res , vol.21 , pp. 936-939
    • Lunter, G.1    Goodson, M.2
  • 69
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • 10.1186/gb-2009-10-3-r25, 2690996, 19261174
    • Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 2009, 10:R25. 10.1186/gb-2009-10-3-r25, 2690996, 19261174.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 70
    • 77958471357 scopus 로고    scopus 로고
    • Differential expression analysis for sequence count data
    • 10.1186/gb-2010-11-10-r106, 3218662, 20979621
    • Anders S, Huber W. Differential expression analysis for sequence count data. Genome Biol 2010, 11:R106. 10.1186/gb-2010-11-10-r106, 3218662, 20979621.
    • (2010) Genome Biol , vol.11
    • Anders, S.1    Huber, W.2
  • 72
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J Royal Stat Soc B 1995, 57:289-300.
    • (1995) J Royal Stat Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 73
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • 10.1093/nar/29.9.e45, 55695, 11328886
    • Pfaffl MW. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 2001, 29:e45. 10.1093/nar/29.9.e45, 55695, 11328886.
    • (2001) Nucleic Acids Res , vol.29
    • Pfaffl, M.W.1
  • 74
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • Watterson GA. On the number of segregating sites in genetical models without recombination. Theor Popul Biol 1975, 276:256-276.
    • (1975) Theor Popul Biol , vol.276 , pp. 256-276
    • Watterson, G.A.1
  • 75
    • 0002907949 scopus 로고
    • The interaction of selection and linkage. I. General considerations; heterotic models
    • 1210557, 17248194
    • Lewontin RC. The interaction of selection and linkage. I. General considerations; heterotic models. Genetics 1964, 49:49-67. 1210557, 17248194.
    • (1964) Genetics , vol.49 , pp. 49-67
    • Lewontin, R.C.1
  • 76
    • 77954714407 scopus 로고    scopus 로고
    • MsABC: a modification of Hudson's ms to facilitate multi-locus ABC analysis
    • 10.1111/j.1755-0998.2010.02832.x, 21565078
    • Pavlidis P, Laurent S, Stephan W. msABC: a modification of Hudson's ms to facilitate multi-locus ABC analysis. Mol Ecol Resour 2010, 10:723-727. 10.1111/j.1755-0998.2010.02832.x, 21565078.
    • (2010) Mol Ecol Resour , vol.10 , pp. 723-727
    • Pavlidis, P.1    Laurent, S.2    Stephan, W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.