메뉴 건너뛰기




Volumn 35, Issue 4, 2012, Pages 377-386

HIV-1 non-b subtypes in Italy: A growing trend

Author keywords

Genotypic resistance test; HIV 1 non B subtypes in Italy; Phylogeny

Indexed keywords

ANTI HUMAN IMMUNODEFICIENCY VIRUS AGENT;

EID: 84869154988     PISSN: 11217138     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (21)

References (77)
  • 1
    • 27544477733 scopus 로고    scopus 로고
    • Protease mutation M89I/V is linked to therapy failure in patients infected with the HIV-1 non-B subtypes C, F or G
    • ABECASIS A.B., DEFORCHE K., SNOECK J., BACHELER L.T., MCKENNA P., CARVALHO A.P., GOMES P., CAMACHO R.J., VANDAMME A.M. (2005). Protease mutation M89I/V is linked to therapy failure in patients infected with the HIV-1 non-B subtypes C, F or G. AIDS. 19, 1799-1806. (Pubitemid 41546598)
    • (2005) AIDS , vol.19 , Issue.16 , pp. 1799-1806
    • Abecasis, A.B.1    Deforche, K.2    Snoeck, J.3    Bacheler, L.T.4    McKenna, P.5    Carvalho, A.P.6    Gomes, P.7    Camacho, R.J.8    Vandamme, A.-M.9
  • 2
    • 43249128155 scopus 로고    scopus 로고
    • Changes in circulation of B and non-B HIV strains: Spotlight on a reference centre for Infectious Diseases in Northern Italy
    • DOI 10.1002/jmv.21163
    • BALDANTI F., PAOLUCCI S., RAVASI G., MACCABRUNI A., MORIGGIA A., BARBARINI G., MASERATI R. (2008). Changes in circulation of B and non-B HIV strains: spotlight on a reference centre for infectious diseases in Northern Italy. J. Med. Virol. 80, 947-952. (Pubitemid 351657003)
    • (2008) Journal of Medical Virology , vol.80 , Issue.6 , pp. 947-952
    • Baldanti, F.1    Paolucci, S.2    Ravasi, G.3    Maccabruni, A.4    Moriggia, A.5    Barbarini, G.6    Maserati, R.7
  • 6
    • 0037415062 scopus 로고    scopus 로고
    • A V106M mutation in HIV-1 clade C viruses exposed to efavirenz confers cross-resistance to non-nucleoside reverse transcriptase inhibitors
    • DOI 10.1097/00002030-200301030-00001
    • BRENNER B., TURNER D., OLIVEIRA M., MOISI D., DETORIO M., CAROBENEM., MARLINKR.G., SCHAPIRO J., ROGER M., WAINBERG M.A. (2003). A V106M mutation in HIV-1 clade C viruses exposed to efavirenz confers cross-resistance to non-nucleoside reverse tran-scriptase inhibitors. AIDS. 17, F1-F5. (Pubitemid 36106291)
    • (2003) AIDS , vol.17 , Issue.1
    • Brenner, B.1    Turner, D.2    Oliveira, M.3    Moisi, D.4    Detorio, M.5    Carobene, M.6    Marlink, R.G.7    Schapiro, J.8    Roger, M.9    Wainberg, M.A.10
  • 7
    • 33745853539 scopus 로고    scopus 로고
    • HIV-1 subtype C viruses rapidly develop K65R resistance to tenofovir in cell culture
    • DOI 10.1097/01.aids.0000232228.88511.0b, PII 0000203020060612000001
    • BRENNER B.G., OLIVEIRA M., DOUALLA-BELL F., MOISI D.D., NTEMGWA M., FRANKEL F., ESSEX M., WAINBERG M.A. (2006). HIV-1 subtype C viruses rapidly develop K65R resistance to tenofovir in cell culture. AIDS. 20, F9-F13. (Pubitemid 44030369)
    • (2006) AIDS , vol.20 , Issue.9
    • Brenner, B.G.1    Oliveira, M.2    Doualla-Bell, F.3    Moisi, D.D.4    Ntemgwa, M.5    Frankel, F.6    Essex, M.7    Wainberg, M.A.8
  • 10
    • 34250717384 scopus 로고    scopus 로고
    • Genetic and phylogenetic evolution of HIV-1 in a low subtype heterogeneity epidemic: The Italian example
    • BUONAGURO L., TAGLIAMONTE M., TORNESELLO M.L., BUONAGURO F.M. (2007). Genetic and phylogenetic evolution of HIV-1 in a low subtype heterogeneity epidemic: the Italian example. Retrovir. 21, 4-34.
    • (2007) Retrovir. , vol.21 , pp. 4-34
    • Buonaguro, L.1    Tagliamonte, M.2    Tornesello, M.L.3    Buonaguro, F.M.4
  • 15
    • 0034952105 scopus 로고    scopus 로고
    • Resistance-associated mutations in the human immunodeficiency virus type 1 subtype C protease gene from treated and untreated patients in the United Kingdom
    • DOI 10.1128/JCM.39.7.2652-2654.2001
    • CANE P.A., DE RUITER A., RICE P., WISELKA M., FOX R., PILLAY D. (2001). Resistance-associated mutations in the human immunodeficiency virus type 1 subtype C protease gene from treated and untreated patients in the United Kingdom. J. Clin. Microbiol. 39, 2652-2654. (Pubitemid 32606251)
    • (2001) Journal of Clinical Microbiology , vol.39 , Issue.7 , pp. 2652-2654
    • Cane, P.A.1    De Ruiter, A.2    Rice, P.3    Wiselka, M.4    Fox, R.5    Pillay, D.6
  • 17
    • 78651110103 scopus 로고    scopus 로고
    • HIV type-1 drug resistance in antiretroviral treatment-naive adults infected with non-B subtype virus in the United Kingdom
    • UK Collaborative Group on HIV Drug Resistance
    • CHILTON D.N., CASTRO H., LATTIMORE S., HARRISON L.J., FEARNHILL E., DELPECH V., RICE B., PILLAY D., DUNN D.T. UK Collaborative Group on HIV Drug Resistance. (2010). HIV type-1 drug resistance in antiretroviral treatment-naive adults infected with non-B subtype virus in the United Kingdom. Antivir. Ther. 15, 985-991.
    • (2010) Antivir. Ther. , vol.15 , pp. 985-991
    • Chilton, D.N.1    Castro, H.2    Lattimore, S.3    Harrison, L.J.4    Fearnhill, E.5    Delpech, V.6    Rice, B.7    Pillay, D.8    Dunn, D.T.9
  • 19
    • 77952739619 scopus 로고    scopus 로고
    • Do the HIV-1 subtypes circulating in Italy resemble the Red Queen running in Carroll's novel?
    • CICCOZZI M., BON I., CIOTTI M. (2010). Do the HIV-1 subtypes circulating in Italy resemble the Red Queen running in Carroll's novel? New Microbiol. 33, 179-181.
    • (2010) New Microbiol. , vol.33 , pp. 179-181
    • Ciccozzi, M.1    Bon, I.2    Ciotti, M.3
  • 23
    • 59649120492 scopus 로고    scopus 로고
    • Template usage is responsible for the preferential acquisition of the K65R reverse transcriptase mutation in subtype C variants of human immunodeficiency virus type 1
    • COUTSINOS D., INVERNIZZI C.F., XU H., MOISI D., OLIVEIRA M., BRENNER B.G., WAINBERG M.A. (2009). Template usage is responsible for the preferential acquisition of the K65R reverse transcriptase mutation in subtype C variants of human immunodeficiency virus type 1. J. Virol. 83, 2029-2033.
    • (2009) J. Virol. , vol.83 , pp. 2029-2033
    • Coutsinos, D.1    Invernizzi, C.F.2    Xu, H.3    Moisi, D.4    Oliveira, M.5    Brenner, B.G.6    Wainberg, M.A.7
  • 29
    • 0003991673 scopus 로고    scopus 로고
    • Inferring phylogenies
    • Sunderland, MA
    • FELSENSTEIN J. (2004). Inferring Phylogenies. Sinauer Associates, Sunderland, MA.
    • (2004) Sinauer Associates
    • Felsenstein, J.1
  • 30
    • 0014211361 scopus 로고
    • Construction of phylogenetic trees
    • FITCH W.M., MARGOLIASH E. (1967). Construction of phylogenetic trees. Science. 155, 279-284.
    • (1967) Science , vol.155 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 33
    • 0038033098 scopus 로고    scopus 로고
    • A novel genetic pathway of human immunodeficiency virus type 1 resistance to stavudine mediated by the K65R mutation
    • DOI 10.1128/JVI.77.10.5685-5693.2003
    • GARCÍA-LERMA J.G., MACINNES H., BENNETT D., REID P., NIDTHA S., WEINSTOCK H., KAPLAN J.E., HENEINE W. (2003). A novel genetic pathway of human immunodeficiency virus type 1 resistance to stavudine mediated by the K65R mutation. J. Virol. 77, 5685-5693. (Pubitemid 36538961)
    • (2003) Journal of Virology , vol.77 , Issue.10 , pp. 5685-5693
    • Garcia-Lerma, J.G.1    MacInnes, H.2    Bennett, D.3    Reid, P.4    Nidtha, S.5    Weinstock, H.6    Kaplan, J.E.7    Heneine, W.8
  • 34
    • 36348971793 scopus 로고    scopus 로고
    • Phylogenetic surveillance of viral genetic diversity and the evolving molecular epidemiology of human immunodeficiency virus type 1
    • DOI 10.1128/JVI.00889-07
    • GIFFORD R.J., DE OLIVEIRA T., RAMBAUT A., PYBUS O.G., DUNN D., VANDAMME A.M., KELLAM P., PILLAY D., UK COLLABORATIVE GROUP ON HIV DRUG RESISTANCE. (2007). Phylogenetic surveillance of viral genetic diversity and the evolving molecular epidemiology of human immunodeficiency virus type 1. J. Virol. 81, 13050-13056. (Pubitemid 350156943)
    • (2007) Journal of Virology , vol.81 , Issue.23 , pp. 13050-13056
    • Gifford, R.J.1    De Oliveira, T.2    Rambaut, A.3    Pybus, O.G.4    Dunn, D.5    Vandamme, A.-M.6    Kellam, P.7    Pillay, D.8
  • 37
    • 11144355443 scopus 로고    scopus 로고
    • Genetic variation at NNRTI resistance-associated positions in patients infected with HIV-1 subtype C
    • DOI 10.1097/00002030-200404090-00008
    • GROSSMAN Z., ISTOMIN V., AVERBUCH D., LORBER M., RISENBERG K., LEVI I., CHOWERS M., BURKE M., BAR YAACOV N., SCHAPIRO J.M. Israel AIDS Multi-Center Study Group. (2004). Genetic variation at NNRTI resistance-associated positions in patients infected with HIV-1 subtype C. AIDS. 18, 909-915. (Pubitemid 38553711)
    • (2004) AIDS , vol.18 , Issue.6 , pp. 909-915
    • Grossman, Z.1    Istomin, V.2    Averbuch, D.3    Lorber, M.4    Risenberg, K.5    Levi, I.6    Chowers, M.7    Burke, M.8    Yaacov, N.B.9    Schapiro, J.M.10
  • 38
    • 33750253231 scopus 로고    scopus 로고
    • Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004
    • DOI 10.1097/01.aids.0000247564.73009.bc, PII 0000203020061024000024
    • HEMELAAR J., GOUWS E., GHYS P.D., OSMANOV S. (2006). Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004. AIDS. 20, W13-W23. (Pubitemid 44611051)
    • (2006) AIDS , vol.20 , Issue.16
    • Hemelaar, J.1    Gouws, E.2    Ghys, P.D.3    Osmanov, S.4
  • 39
    • 79952414942 scopus 로고    scopus 로고
    • Global trends in molecular epidemiology of HIV-1 during 2000-2007
    • WHO-UNAIDS Network for HIV Isolation and Characterisation
    • HEMELAAR J., GOUWS E., GHYS P.D., OSMANOV S. WHO-UNAIDS Network for HIV Isolation and Characterisation. (2011). Global trends in molecular epidemiology of HIV-1 during 2000-2007. AIDS 13, 679-689.
    • (2011) AIDS , vol.13 , pp. 679-689
    • Hemelaar, J.1    Gouws, E.2    Ghys, P.D.3    Osmanov, S.4
  • 41
    • 84869179729 scopus 로고    scopus 로고
    • HIV-1 Non-subtype B Workgroup: The HIV-1 Non-subtype B Workgroup: An international collaboration for the collection and analysis of HIV-1 non-subtype B data
    • KANTOR R., SHAFER R.W., KATZENSTEIN D. (2005). HIV-1 Non-subtype B Workgroup: the HIV-1 Non-subtype B Workgroup: an international collaboration for the collection and analysis of HIV-1 non-subtype B data. Med. Gen. Med. 23, 7-71.
    • (2005) Med. Gen. Med. , vol.23 , pp. 7-71
    • Kantor, R.1    Shafer, R.W.2    Katzenstein, D.3
  • 42
    • 70349428513 scopus 로고    scopus 로고
    • Signature nucleotide polymorphisms at positions 64 and 65 in reverse transcriptase favor the selection of the K65R resistance mutation in HIV-1 subtype C
    • INVERNIZZI C.F., COUTSINOS D., OLIVEIRA M., MOISI D., BRENNER B.G., WAINBERG M.A. (2009). Signature nucleotide polymorphisms at positions 64 and 65 in reverse transcriptase favor the selection of the K65R resistance mutation in HIV-1 subtype C. J. Infect. Dis. 200, 1202-1206.
    • (2009) J. Infect. Dis. , vol.200 , pp. 1202-1206
    • Invernizzi, C.F.1    Coutsinos, D.2    Oliveira, M.3    Moisi, D.4    Brenner, B.G.5    Wainberg, M.A.6
  • 47
    • 25144444139 scopus 로고    scopus 로고
    • HIV-1 subtypes in Spain: A retrospective analysis from 1995 to 2003
    • DOI 10.1111/j.1468-1293.2005.00313.x
    • LOSPITAO E., ALVAREZ A., SORIANO V., HOLGUIN A. (2005). HIV-1 subtypes in Spain: a retrospective analysis from 1995 to 2003. HIV Med. 6, 313-320. (Pubitemid 41335139)
    • (2005) HIV Medicine , vol.6 , Issue.5 , pp. 313-320
    • Lospitao, E.1    Alvarez, A.2    Soriano, V.3    Holguin, A.4
  • 49
    • 33845954396 scopus 로고    scopus 로고
    • K65R development among subtype C HIV-1-infected patients in tenofovir DF clinical trials [8]
    • DOI 10.1097/QAD.0b013e32801199ee, PII 0000203020070111000030
    • MILLER M.D., MARGOT N., MCCOLL D., CHENG A.K. (2007). K65R development among subtype C HIV-1 patients in tenofovir DF clinical trials. AIDS 21, 265-266. (Pubitemid 46036948)
    • (2007) AIDS , vol.21 , Issue.2 , pp. 265-266
    • Miller, M.D.1    Margot, N.2    McColl, D.3    Cheng, A.K.4
  • 52
    • 34247570910 scopus 로고    scopus 로고
    • Molecular epidemiology and prevalence of drug resistance-associated mutations in newly diagnosed HIV-1 patients in Portugal
    • DOI 10.1016/j.meegid.2007.01.009, PII S1567134807000305, 11th International Workshop on Virus Evolution and Molecular Epidemiology
    • PALMA A.C., ARAUJO F., DUQUE V., BORGES F., PAIXAO M.T., CAMACHO R., PORTUGUESE SPREAD NETWORK. (2007). Molecular epidemiology and prevalence of drug resistance-associated mutations in newly diagnosed HIV-1 patients in Portugal. Infect. Genet. Evol. 7, 391-398. (Pubitemid 46667770)
    • (2007) Infection, Genetics and Evolution , vol.7 , Issue.3 , pp. 391-398
    • Palma, A.C.1    Araujo, F.2    Duque, V.3    Borges, F.4    Paixao, M.T.5    Camacho, R.6
  • 54
    • 77957045363 scopus 로고    scopus 로고
    • Genetic diversity among human immunodeficiency virus-1 non-B subtypes in viral load and drug resistance assays
    • PEETERS M, AGHOKENG A.F., DELAPORTE E. (2010). Genetic diversity among human immunodeficiency virus-1 non-B subtypes in viral load and drug resistance assays. Clin. Microbiol. Infect. 16, 1525-1531.
    • (2010) Clin. Microbiol. Infect. , vol.16 , pp. 1525-1531
    • Peeters, M.1    Aghokeng, A.F.2    Delaporte, E.3
  • 55
    • 79953224855 scopus 로고    scopus 로고
    • HIV integrase variability and genetic barrier in antiretroviral naïve and experienced patients
    • PIRALLA A., PAOLUCCI S., GULMINETTI R., COMOLLI G., BALDANTI F. (2011). HIV integrase variability and genetic barrier in antiretroviral naïve and experienced patients. Virol. J. 8, 149.
    • (2011) Virol. J. , vol.8 , pp. 149
    • Piralla, A.1    Paolucci, S.2    Gulminetti, R.3    Comolli, G.4    Baldanti, F.5
  • 56
    • 12444319405 scopus 로고    scopus 로고
    • Empirical problems of the hierarchical likelihood tatio test for model selection
    • DOI 10.1080/10635150490888868
    • POL D. (2004). Empirical problems of the hierarchical likelihood ratio test for model selection. Syst. Biol. 53, 949-962. (Pubitemid 40141317)
    • (2004) Systematic Biology , vol.53 , Issue.6 , pp. 949-962
    • Pol, D.1
  • 58
    • 79960112110 scopus 로고    scopus 로고
    • A cluster of patients with recombinant B/F HIV-1 infection: Epidemiological, clinical, and virological aspects
    • ROSSOTTI R., FOGLIENI B., MOLTENI C., GATTI M., GUARNORI I., LA RUSSA E., PRATI D., ORANI A. (2011). A cluster of patients with recombinant B/F HIV-1 infection: epidemiological, clinical, and virological aspects. J. Med. Virol. 83, 493-498.
    • (2011) J. Med. Virol. , vol.83 , pp. 493-498
    • Rossotti, R.1    Foglieni, B.2    Molteni, C.3    Gatti, M.4    Guarnori, I.5    La Russa, E.6    Prati, D.7    Orani, A.8
  • 59
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU N, NEI M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 65
    • 0030892866 scopus 로고    scopus 로고
    • Dynamics of the HIV-1 subtype distribution in the Swedish HIV-1 epidemic during the period 1980 to 1993
    • SONNERBORG A., DURDEVIC S., GIESECKE J., SÄLLBERG M. (1997). Dynamics of the HIV-1 subtype distribution in the Swedish HIV-1 epidemic during the period 1980 to 1993. AIDS Res. Hum. Retrovir. 13, 343-345. (Pubitemid 27117947)
    • (1997) AIDS Research and Human Retroviruses , vol.13 , Issue.4 , pp. 343-345
    • Sonnerborg, A.1    Durdevic, S.2    Giesecke, J.3    Sallberg, M.4
  • 69
    • 1442274710 scopus 로고    scopus 로고
    • Detection of HIV type 1 non-B subtypes in Sicily, Italy
    • DOI 10.1089/088922204773004987
    • TRAMUTO F., VITALE F., BONURA F., ROMANO N., GROUP FOR HIV-1 ANTIRETROVIRAL STUDIES IN SICILY. (2004). Detection of HIV type 1 non-B subtypes in Sicily, Italy. AIDS Res. Hum. Retrovir. 20, 251-254. (Pubitemid 38280937)
    • (2004) AIDS Research and Human Retroviruses , vol.20 , Issue.2 , pp. 251-254
    • Tramuto, F.1    Vitale, F.2    Bonura, F.3    Romano, N.4
  • 74
    • 0030749810 scopus 로고    scopus 로고
    • Bayesian phylogenetic inference using DNA sequences: A Markov Chain Monte Carlo method
    • YANG Z., RANNALA B. (1997). Bayesian phylogenetic inference using DNA sequences: a Markov chain Monte Carlo method. Mol. Biol. and Evol. 14, 717-724. (Pubitemid 27287292)
    • (1997) Molecular Biology and Evolution , vol.14 , Issue.7 , pp. 717-724
    • Yang, Z.1    Rannala, B.2
  • 76
    • 1842852044 scopus 로고    scopus 로고
    • Theme 4. Genotypic resistance tests for the management of the HIV-infected patient with non-B viral isolates
    • VISCO-COMANDINI U., BALOTTA C. (2003). Genotypic resistance tests for the management of the HIV-in-fected patient with non-B viral isolates. Scand. J. Infect. Dis. Suppl. 106, 75-8. Review. (Pubitemid 38228557)
    • (2003) Scandinavian Journal of Infectious Diseases, Supplement , Issue.106 , pp. 75-78
    • Visco-Comandini, U.1    Balotta, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.