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Volumn 11, Issue 9, 2010, Pages 593-602

Changing patterns in HIV-1 non-B clade prevalence and diversity in Italy over three decades

Author keywords

HIV 1; New diagnoses of HIV 1 infection; Recombinants; Subtypes; Variability

Indexed keywords

ADULT; AFRICAN AMERICAN; ARTICLE; CLADISTICS; CONTROLLED STUDY; DEMOGRAPHY; ETHNICITY; FEMALE; HETEROSEXUALITY; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS PREVALENCE; ITALY; MAJOR CLINICAL STUDY; MALE; MULTIVARIATE ANALYSIS; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SPECIES DIVERSITY; VIRUS STRAIN;

EID: 77956450219     PISSN: 14642662     EISSN: 14681293     Source Type: Journal    
DOI: 10.1111/j.1468-1293.2010.00832.x     Document Type: Article
Times cited : (52)

References (37)
  • 2
    • 77956428155 scopus 로고    scopus 로고
    • HIV-1 Subtype and Circulating Recombinant Form (CRF) Reference Sequences, 2005. Los Alamos National Laboratory, Los Alamos, NM 87545., Available at, (accessed March 2010)
    • Leitner T, Korber B, Daniels M, Calef C, Foley B. http://www.hiv.lanl.gov/content/sequence/HIV/COMPENDIUM/2005/partI/leitn er.pdf, HIV-1 Subtype and Circulating Recombinant Form (CRF) Reference Sequences, 2005. Los Alamos National Laboratory, Los Alamos, NM 87545., Available at, (accessed March 2010)
    • Leitner, T.1    Korber, B.2    Daniels, M.3    Calef, C.4    Foley, B.5
  • 3
    • 42049086982 scopus 로고    scopus 로고
    • The challenge of HIV-1 subtype diversity
    • Taylor BS, Hammer SM. The challenge of HIV-1 subtype diversity. New Engl J Med 2008, 12:1590-1602.
    • (2008) New Engl J Med , vol.12 , pp. 1590-1602
    • Taylor, B.S.1    Hammer, S.M.2
  • 4
    • 33750253231 scopus 로고    scopus 로고
    • Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004
    • Hemelaar J, Gouws E, Ghys PD, Osmanov S. Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004. AIDS 2006, 20:W13-W23.
    • (2006) AIDS , vol.20
    • Hemelaar, J.1    Gouws, E.2    Ghys, P.D.3    Osmanov, S.4
  • 5
    • 0029795801 scopus 로고    scopus 로고
    • Evidence for HIV type 1 strains of U.S. intravenous drug users as founders of AIDS epidemic among intravenous drug users in northern Europe
    • Lukashov VV, Kuiken CL, Vlahov D, Coutinho RA, Goudsmit J. Evidence for HIV type 1 strains of U.S. intravenous drug users as founders of AIDS epidemic among intravenous drug users in northern Europe. AIDS Res Hum Retroviruses 1996, 12:1179-1183.
    • (1996) AIDS Res Hum Retroviruses , vol.12 , pp. 1179-1183
    • Lukashov, V.V.1    Kuiken, C.L.2    Vlahov, D.3    Coutinho, R.A.4    Goudsmit, J.5
  • 6
    • 0030892866 scopus 로고    scopus 로고
    • Dynamics of the HIV-1 subtype distribution in the Swedish HIV-1 epidemic during the period 1980 to 1993
    • Sonnerborg A, Durdevic S, Giesecke J, Sällberg M. Dynamics of the HIV-1 subtype distribution in the Swedish HIV-1 epidemic during the period 1980 to 1993. AIDS Res Hum Retroviruses 1997, 13:343-345.
    • (1997) AIDS Res Hum Retroviruses , vol.13 , pp. 343-345
    • Sonnerborg, A.1    Durdevic, S.2    Giesecke, J.3    Sällberg, M.4
  • 7
    • 0035881079 scopus 로고    scopus 로고
    • ICONA study group. Increasing prevalence of non-clade B HIV-1 strains in heterosexual men and women, as monitored by analysis of reverse transcriptase and protease sequences
    • Balotta C, Facchi G, Violin M. ICONA study group. Increasing prevalence of non-clade B HIV-1 strains in heterosexual men and women, as monitored by analysis of reverse transcriptase and protease sequences. J Acquir Immune Defic Syndr 2001, 27:499-505.
    • (2001) J Acquir Immune Defic Syndr , vol.27 , pp. 499-505
    • Balotta, C.1    Facchi, G.2    Violin, M.3    et al4
  • 8
    • 12144287630 scopus 로고    scopus 로고
    • Stable prevalence of genotypic drug resistance mutations but increase in non-B virus among patients with primary HIV-1 infection in France
    • Chaix ML, Descamps D, Harzic M. Stable prevalence of genotypic drug resistance mutations but increase in non-B virus among patients with primary HIV-1 infection in France. AIDS 2003, 17:2635-2643.
    • (2003) AIDS , vol.17 , pp. 2635-2643
    • Chaix, M.L.1    Descamps, D.2    Harzic, M.3    et al4
  • 10
    • 25144444139 scopus 로고    scopus 로고
    • HIV-1 subtypes in Spain: a retrospective analysis from 1995 to 2003
    • Lospitao E, Alvarez A, Soriano V, Holguín A. HIV-1 subtypes in Spain: a retrospective analysis from 1995 to 2003. HIV Med 2005, 6:313-320.
    • (2005) HIV Med , vol.6 , pp. 313-320
    • Lospitao, E.1    Alvarez, A.2    Soriano, V.3    Holguín, A.4
  • 11
    • 36348971793 scopus 로고    scopus 로고
    • Phylogenetic surveillance of viral genetic diversity and the evolving molecular epidemiology of human immunodeficiency virus type 1
    • Gifford RJ, de Oliveira T, Rambaut A. Phylogenetic surveillance of viral genetic diversity and the evolving molecular epidemiology of human immunodeficiency virus type 1. J Virol 2007, 81:13050-13056.
    • (2007) J Virol , vol.81 , pp. 13050-13056
    • Gifford, R.J.1    de Oliveira, T.2    Rambaut, A.3    et al4
  • 12
    • 34247570910 scopus 로고    scopus 로고
    • Portuguese SPREAD network. Molecular epidemiology and prevalence of drug resistance-associated mutations in newly diagnosed HIV-1 patients in Portugal
    • Palma AC, Araújo F, Duque V, Borges F, Paixão MT, Camacho R. Portuguese SPREAD network. Molecular epidemiology and prevalence of drug resistance-associated mutations in newly diagnosed HIV-1 patients in Portugal. Infect Genet Evol 2007, 7:391-398.
    • (2007) Infect Genet Evol , vol.7 , pp. 391-398
    • Palma, A.C.1    Araújo, F.2    Duque, V.3    Borges, F.4    Paixão, M.T.5    Camacho, R.6
  • 13
    • 37349088627 scopus 로고    scopus 로고
    • Swiss HIV cohort study. Transmission of HIV-1 drug resistance in Switzerland: a 10-year molecular epidemiology survey
    • Yerly S, von Wyl V, Ledergerber B. Swiss HIV cohort study. Transmission of HIV-1 drug resistance in Switzerland: a 10-year molecular epidemiology survey. AIDS 2007, 21:2223-2229.
    • (2007) AIDS , vol.21 , pp. 2223-2229
    • Yerly, S.1    von Wyl, V.2    Ledergerber, B.3    et al4
  • 14
    • 27944503360 scopus 로고    scopus 로고
    • CASCADE collaboration. Prevalence of transmitted HIV-1 drug resistance and the role of resistance algorithms: data from seroconverters in the CASCADE collaboration from 1987 to 2003
    • Masquelier B, Bhaskaran K, Pillay D. CASCADE collaboration. Prevalence of transmitted HIV-1 drug resistance and the role of resistance algorithms: data from seroconverters in the CASCADE collaboration from 1987 to 2003. J Acquir Immune Defic Syndr 2005, 40:505-511.
    • (2005) J Acquir Immune Defic Syndr , vol.40 , pp. 505-511
    • Masquelier, B.1    Bhaskaran, K.2    Pillay, D.3    et al4
  • 15
    • 24644472997 scopus 로고    scopus 로고
    • Prevalence of drug-resistant HIV-1 variants in untreated individuals in Europe: implications for clinical management
    • Wensing AM, Vijver DA, Angarano G. Prevalence of drug-resistant HIV-1 variants in untreated individuals in Europe: implications for clinical management. J Infect Dis 2005, 192:958-966.
    • (2005) J Infect Dis , vol.192 , pp. 958-966
    • Wensing, A.M.1    Vijver, D.A.2    Angarano, G.3    et al4
  • 16
    • 41449090659 scopus 로고    scopus 로고
    • Transmission of drug-resistant HIV-1 in Europe remains limited to single classes
    • Wensing AMJ, Vercauteren J, Vijver DA. Transmission of drug-resistant HIV-1 in Europe remains limited to single classes. AIDS 2008, 22:625-635.
    • (2008) AIDS , vol.22 , pp. 625-635
    • Wensing, A.M.J.1    Vercauteren, J.2    Vijver, D.A.3    et al4
  • 17
    • 0036319711 scopus 로고    scopus 로고
    • Molecular epidemiology of HIV-1 genetic forms and its significance for vaccine development and therapy
    • Thomson MM, Pérez-Alvarez L, Nájera R. Molecular epidemiology of HIV-1 genetic forms and its significance for vaccine development and therapy. Lancet Infect Dis 2002, 2:461-471.
    • (2002) Lancet Infect Dis , vol.2 , pp. 461-471
    • Thomson, M.M.1    Pérez-Alvarez, L.2    Nájera, R.3
  • 18
    • 77956441003 scopus 로고    scopus 로고
    • Notiziario COA Marzo 2009. Available at, (accessed March 2010)
    • http://www.iss.it/binary/publ/cont/COAonline.pdf, Notiziario COA Marzo 2009. Available at, (accessed March 2010)
  • 19
    • 24644432882 scopus 로고    scopus 로고
    • Molecular footprint of drug-selective pressure in a human immunodeficiency virus transmission chain
    • Lemey P, Derdelinckx I, Rambaut A. Molecular footprint of drug-selective pressure in a human immunodeficiency virus transmission chain. J Virol 2005, 79:11981-11989.
    • (2005) J Virol , vol.79 , pp. 11981-11989
    • Lemey, P.1    Derdelinckx, I.2    Rambaut, A.3    et al4
  • 20
    • 62749131195 scopus 로고    scopus 로고
    • UK collaborative group on HIV drug resistance. Demonstration of sustained drug-resistant human immunodeficiency virus type 1 lineages circulating among treatment-naïve individuals
    • Hué S, Gifford RJ, Dunn D, Fernhill E, Pillay D. UK collaborative group on HIV drug resistance. Demonstration of sustained drug-resistant human immunodeficiency virus type 1 lineages circulating among treatment-naïve individuals. J Virol 2009, 83:2645-2654.
    • (2009) J Virol , vol.83 , pp. 2645-2654
    • Hué, S.1    Gifford, R.J.2    Dunn, D.3    Fernhill, E.4    Pillay, D.5
  • 21
    • 0031717906 scopus 로고    scopus 로고
    • Long-read direct infrared sequencing of crude PCR products for prediction of resistance to HIV-1 reverse transcriptase and protease inhibitors
    • Zazzi M, Riccio ML, Venturi G. Long-read direct infrared sequencing of crude PCR products for prediction of resistance to HIV-1 reverse transcriptase and protease inhibitors. Mol Biotechnol 1998, 10:1-8.
    • (1998) Mol Biotechnol , vol.10 , pp. 1-8
    • Zazzi, M.1    Riccio, M.L.2    Venturi, G.3    et al4
  • 22
    • 0036065416 scopus 로고    scopus 로고
    • Performance of an in-house genotypic antiretroviral resistance assay in patients pretreated with multiple human immunodeficiency virus type 1 protease and reverse transcriptase inhibitors
    • Peduzzi C, Pierotti P, Venturi G. Performance of an in-house genotypic antiretroviral resistance assay in patients pretreated with multiple human immunodeficiency virus type 1 protease and reverse transcriptase inhibitors. J Clin Virol 2002, 25:57-62.
    • (2002) J Clin Virol , vol.25 , pp. 57-62
    • Peduzzi, C.1    Pierotti, P.2    Venturi, G.3    et al4
  • 25
    • 20044395615 scopus 로고    scopus 로고
    • HIV-1 subtypes and circulating recombinant forms (CRFs) from HIV-infected patients residing in two regions of central and southern Italy
    • Monno L, Brindicci G, Lo Caputo S. HIV-1 subtypes and circulating recombinant forms (CRFs) from HIV-infected patients residing in two regions of central and southern Italy. J Med Virol 2005, 75:483-490.
    • (2005) J Med Virol , vol.75 , pp. 483-490
    • Monno, L.1    Brindicci, G.2    Lo Caputo, S.3    et al4
  • 26
    • 43249128155 scopus 로고    scopus 로고
    • Changes in circulation of B and non-B HIV strains: spotlight on a reference centre for infectious diseases in Northern Italy
    • Baldanti F, Paolucci S, Ravasi G. Changes in circulation of B and non-B HIV strains: spotlight on a reference centre for infectious diseases in Northern Italy. J Med Virol 2008, 80:947-952.
    • (2008) J Med Virol , vol.80 , pp. 947-952
    • Baldanti, F.1    Paolucci, S.2    Ravasi, G.3    et al4
  • 27
    • 30944461040 scopus 로고    scopus 로고
    • Molecular epidemiology of HIV-1 variants in the global AIDS pandemic: an update
    • Thomson MM, Nájera R. Molecular epidemiology of HIV-1 variants in the global AIDS pandemic: an update. AIDS Rev 2005, 7:210-224.
    • (2005) AIDS Rev , vol.7 , pp. 210-224
    • Thomson, M.M.1    Nájera, R.2
  • 28
    • 0034104243 scopus 로고    scopus 로고
    • Genetic evidence of multiple transmissions of HIV type 1 subtype F within Romania from adult blood donors to children
    • Op De Coul E, van den Burg R, Asjö B. Genetic evidence of multiple transmissions of HIV type 1 subtype F within Romania from adult blood donors to children. AIDS Res Hum Retroviruses 2000, 16:327-336.
    • (2000) AIDS Res Hum Retroviruses , vol.16 , pp. 327-336
    • Op De Coul, E.1    van den Burg, R.2    Asjö, B.3    et al4
  • 29
    • 6344241308 scopus 로고    scopus 로고
    • Analysis of near full-length genome sequences of HIV type 1 BF intersubtype recombinant viruses from Brazil reveals their independent origins and their lack of relationship to CRF12_BF
    • Thomson M, Sierra M, Tanuri A. Analysis of near full-length genome sequences of HIV type 1 BF intersubtype recombinant viruses from Brazil reveals their independent origins and their lack of relationship to CRF12_BF. AIDS Res Hum Retroviruses 2004, 20:1126-1133.
    • (2004) AIDS Res Hum Retroviruses , vol.20 , pp. 1126-1133
    • Thomson, M.1    Sierra, M.2    Tanuri, A.3    et al4
  • 30
    • 34247895553 scopus 로고    scopus 로고
    • Natural variability in the HR-1 and HR-2 domains of HIV type 1 gp41 from different clades circulating in Italy
    • Razzolini F, Vicenti I, Saladini F. Natural variability in the HR-1 and HR-2 domains of HIV type 1 gp41 from different clades circulating in Italy. AIDS Res Hum Retroviruses 2007, 23:558-563.
    • (2007) AIDS Res Hum Retroviruses , vol.23 , pp. 558-563
    • Razzolini, F.1    Vicenti, I.2    Saladini, F.3    et al4
  • 31
    • 53649083887 scopus 로고    scopus 로고
    • Performance of three commercial viral load assays, versant human immunodeficiency virus type 1 (HIV-1) RNA bDNA v3.0, Cobas AmpliPrep/Cobas TaqMan HIV-1, and NucliSens HIV-1 EasyQ v1.2, testing HIV-1 non-B subtypes and recombinant variants
    • Holguín A, López M, Molinero M, Soriano V. Performance of three commercial viral load assays, versant human immunodeficiency virus type 1 (HIV-1) RNA bDNA v3.0, Cobas AmpliPrep/Cobas TaqMan HIV-1, and NucliSens HIV-1 EasyQ v1.2, testing HIV-1 non-B subtypes and recombinant variants. J Clin Microbiol 2008, 46:2918-2923.
    • (2008) J Clin Microbiol , vol.46 , pp. 2918-2923
    • Holguín, A.1    López, M.2    Molinero, M.3    Soriano, V.4
  • 32
    • 34547115470 scopus 로고    scopus 로고
    • Natural variation in the V3 crown of human immunodeficiency virus type 1 affects replicative fitness and entry inhibitor sensitivity
    • Lobritz MA, Marozsan AJ, Troyer RM, Arts EJ. Natural variation in the V3 crown of human immunodeficiency virus type 1 affects replicative fitness and entry inhibitor sensitivity. J Virol 2007, 81:8258-8269.
    • (2007) J Virol , vol.81 , pp. 8258-8269
    • Lobritz, M.A.1    Marozsan, A.J.2    Troyer, R.M.3    Arts, E.J.4
  • 33
    • 34547128097 scopus 로고    scopus 로고
    • Coreceptor tropism in human immunodeficiency virus type 1 subtype D: high prevalence of CXCR4 tropism and heterogeneous composition of viral populations
    • Huang W, Eshleman SH, Toma J. Coreceptor tropism in human immunodeficiency virus type 1 subtype D: high prevalence of CXCR4 tropism and heterogeneous composition of viral populations. J Virol 2007, 81:7885-7893.
    • (2007) J Virol , vol.81 , pp. 7885-7893
    • Huang, W.1    Eshleman, S.H.2    Toma, J.3    et al4
  • 34
    • 71049159978 scopus 로고    scopus 로고
    • Differences in resistance mutations among HIV-1 non-subtype B infections: a systematic review of evidence (1996-2008)
    • Martinez-Cajas JL, Pai NP, Klein MB, Wainberg MA. Differences in resistance mutations among HIV-1 non-subtype B infections: a systematic review of evidence (1996-2008). J Int AIDS Soc 2009, 12:11.
    • (2009) J Int AIDS Soc , vol.12 , pp. 11
    • Martinez-Cajas, J.L.1    Pai, N.P.2    Klein, M.B.3    Wainberg, M.A.4
  • 35
    • 21644472626 scopus 로고    scopus 로고
    • The replicative fitness of primary human immunodeficiency virus type 1 (HIV-1) group M, HIV-1 group O, and HIV-2 isolates
    • Ariën KK, Abraha A, Quiñones-Mateu ME, Kestens L, Vanham G, Arts EJ. The replicative fitness of primary human immunodeficiency virus type 1 (HIV-1) group M, HIV-1 group O, and HIV-2 isolates. J Virol 2005, 79:8979-8990.
    • (2005) J Virol , vol.79 , pp. 8979-8990
    • Ariën, K.K.1    Abraha, A.2    Quiñones-Mateu, M.E.3    Kestens, L.4    Vanham, G.5    Arts, E.J.6
  • 36
    • 64549117838 scopus 로고    scopus 로고
    • Impact of HIV-1 viral subtype on CD4+T-cell decline and clinical outcomes in antiretroviral naive patients receiving universal healthcare
    • Keller M, Lu Y, Lalonde RG, Klein MB. Impact of HIV-1 viral subtype on CD4+T-cell decline and clinical outcomes in antiretroviral naive patients receiving universal healthcare. AIDS 2009, 23:731-737.
    • (2009) AIDS , vol.23 , pp. 731-737
    • Keller, M.1    Lu, Y.2    Lalonde, R.G.3    Klein, M.B.4
  • 37
    • 23244440803 scopus 로고    scopus 로고
    • Comparison of mother-to-child transmission rates in Ugandan women with subtype A versus D HIV-1 who received single-dose nevirapine prophylaxis: HIV network for prevention trials 012
    • Eshleman SH, Guay LA, Mwatha A. Comparison of mother-to-child transmission rates in Ugandan women with subtype A versus D HIV-1 who received single-dose nevirapine prophylaxis: HIV network for prevention trials 012. J Acquir Immune Defic Syndr 2005, 39:593-597.
    • (2005) J Acquir Immune Defic Syndr , vol.39 , pp. 593-597
    • Eshleman, S.H.1    Guay, L.A.2    Mwatha, A.3    et al4


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