Soybeans Grown in the Chernobyl Area Produce Fertile Seeds that Have Increased Heavy Metal Resistance and Modified Carbon Metabolism

PLoS ONE

Volumn 7, Issue 10, 2012, Pages

  Klubicová, Katarína ^a   Danchenko, Maksym ^a,b   Skultety, Ludovit ^a,c   Berezhna, Valentyna V ^b   Uvackova, Lubica ^a   Rashydov, Namik M ^b   Hajduch, Martin ^a  

^a INSTITUTE OF CHEMISTRY   (Slovakia)

^b INSTITUTE OF CELL BIOLOGY AND GENETIC ENGINEERING   (Ukraine)

^c INSTITUTE OF VIROLOGY   (Slovakia)

Author keywords

[No Author keywords available]

Indexed keywords

ACYL CARRIER PROTEIN;

ARTICLE; CARBON METABOLISM; CHERNOBYL ACCIDENT; CITRIC ACID CYCLE; CONTROLLED STUDY; CYTOPLASM; ENZYME ACTIVITY; FATTY ACID SYNTHESIS; FERTILIZATION; NONHUMAN; PLANT GROWTH; PLANT SEED; PLASTID; PROTEIN ANALYSIS; PROTEIN METABOLISM; PROTEIN SYNTHESIS; PROTEIN TRANSPORT; SIGNAL TRANSDUCTION; SOYBEAN; TWO DIMENSIONAL ELECTROPHORESIS;

CARBON; CHERNOBYL NUCLEAR ACCIDENT; GENE EXPRESSION REGULATION, PLANT; METALS, HEAVY; PLANT PROTEINS; PLASTIDS; PROTEOME; SEED STORAGE PROTEINS; SEEDS; SOYBEANS;

GLYCINE MAX;

EID: 84868124528     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0048169     Document Type: Article

References (56)

1. Fuller HJ, (1930) Stimulatory effects of ultra-violet radiation upon higher plants. Science 72: 535-536.
2. Kuchma O, Vornam B, Finkeldey R, (2011) Mutation rates in Scots pine (Pinus sylvestris L.) from the Chernobyl exclusion zone evaluated with amplified fragment-length polymorphisms (AFLPs) and microsatellite markers. Mutat Res 725: 29-35.
3. Vornam B, Arkhipov A, Finkeldey R, (2012) Nucleotide diversity and gene expression of Catalase and Glutathione peroxidase in irradiated Scots pine (Pinus sylvestris L.) from the Chernobyl exclusion zone. J Environ Radioact 106: 20-6.
4. Kovalchuk O, Burke P, Arkhipov A, Kuchma N, James SJ, et al. (2003) Genome hypermethylation in Pinus silvestris of Chernobyl-a mechanism for radiation adaptation? Mutat Res Fundam Mol Mech Mugag 529: 13-20.
5. Kovalchuk O, Kovalchuk I, Arkhipov A, Hohn B, Dubrova YE (2003) Extremely complex pattern of microsatellite mutation in the germLine of wheat exposed to the post-Chernobyl radioactive contamination. Mutat Res 525: 93-101.
6. Kovalchuk O, Dubrova YE, Arkhipov A, Hohn B, Kovalchuk I, (2000) Wheat mutation rate after Chernobyl. Nature 407: 583-584.
7. Kovalchuk I, Abramov V, Pogribny I, Kovalchuk O, (2004) Molecular aspects of plant adaptation to life in the Chernobyl zone. Plant Physiol 135: 357-363.
8. Danchenko M, Skultety L, Rashydov NM, Berezhna VV, Mátel L, et al. (2009) Proteomic analysis of mature soybean seeds from the Chernobyl area suggests plant adaptation to the contaminated environment. J Proteome Res 8: 2915-2922.
9. Hajduch M. Ganapathy A. Stein JW, Thelen JJ, (2005) A systematic proteomic study of seed filling in soybean. Establishment of high-resolution two-dimensional reference maps, expression profiles, and an interactive proteome database. Plant Physiol 137: 1397-1419.
10. Agrawal GK, Hajduch M, Graham K, Thelen JJ, (2008) In-depth investigation of the soybean seed-filling proteome and comparison with a parallel study of rapeseed. Plant Physiol 148: 504-518.
11. Bradford MM, (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
12. Berlizov AN, Sajeniouk AD, Tryshyn VV (2005) Technique for Stronsium-90, Plutonium and Americium Isotope Content Determination in Environmental Samples. J. Radioanal. Nucl. Chem. 263: N 2, 307.
13. Akbar E, Yaakob Z, Kamarudin S, Ismail M, (2009) Characteristics and composition of Jatropha curcas oil seed from Malaysia and its potential as biodiesel feedstock. Eur J Scientific Res 29: 396-403.
14. Hurkman WJ, Tanaka CK, (1986) Solubilization of plant membrane proteins for analysis by two-dimensional gel electrophoresis. Plant Physiol 81: 802-806.
15. Plumb RS, Johnson KA, Rainville P, Smith BW, Wilson ID, et al. (2006) UPLC/MS(E) a new approach for generating molecular fragment information for biomarker structure elucidation. Rapid Commun Mass Spectrom 20: 1989-1994.
16. Klubicová K, Danchenko M, Skultety L, Miernyk JA, Rashydov NM, et al. (2011) Proteomics analysis of flax grown in Chernobyl area suggests limited effect of contaminated environment on seed proteome. Environ Sci Technol 44: 6940-6946.
17. Mienke DW, Chen J, Beachy RN, (1981) Expression of storage-protein genes during soybean seed development. Planta 153: 130-139.
18. Bevan M, Bancroft I, Bent E, Love K, Goodman H, et al. (1998) Analysis of 19 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature 391: 485-488.
19. Miernyk JA, Preťová A, Olmedilla A, Klubicová K, Obert B, et al. (2011) Using proteomics to study sexual reproduction in angiosperms. Sex Plant Reprod 24: 9-22.
20. Hajduch M, Casteel JE, Hurrelmeyer KE, Song Z, Agrawal GK, et al. (2006) Proteomic analysis of seed filling in Brassica napus. Developmental characterization of metabolic isozymes using high-resolution two-dimensional gel electrophoresis. Plant Physiol 141: 32-46.
21. Barabasi AL, Oltvai ZN, (2004) Network biology: understanding the cell's functional organization. Nat Rev Genet 5: 101-113.
22. Rolleston FS, (1972) A theoretical background to the use of measured intermediates in the study of the control of intermediary metabolism. Curr Top Cell Regul 5: 47-54.
23. Cornish-Bowden A (1996) Fundamentals of Enzyme Kinetics. Portland Press, London.
24. Fell DA (1996) Understanding the Control of Metabolism. Portland Press, London.
25. Fernie AR, Stitt M, (2012) On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry, and network interactions scientific correspondence. Plant Physiol 158: 1139-1145.
26. Sales MP, Gerhardt IR, Grossi-De-Sá MF, Xavier-Filho J, (2000) Do legume storage proteins play a role in defending seeds against bruchids? Plant Physiol 124: 515-22.
27. Regente M, De La Canal L, (2001) Are storage 2S albumins also defensive proteins? Physiol. Mol. Plant Pathol 59: 275-276.
28. Rajjou L, Belghazi M, Huguet R, Robin C, Moreau A, et al. (2006) Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. Plant Physiol 141: 910-923.
29. Aghaei K, Ehsanpour AA, Shah AH, Komatsu S, (2009) Proteome analysis of soybean hypocotyl and root under salt stress. Amino Acids 36: 91-98.
30. Schmidt MA, Barbazuk WB, Sandford M, May G, Song Z, et al. (2011) Silencing of soybean seed storage proteins results in a rebalanced protein composition preserving seed protein content without major collateral changes in the metabolome and transcriptome. Plant Physiol 156: 330-345.
31. Hectors K, Jacques E, Prinsen E, Guisez Y, Verbelen JP, et al. (2010) UV radiation reduces epidermal cell expansion in leaves of Arabidopsis thaliana. J Exp Bot 61: 4339-4349.
32. Steffens JC, (1990) The heavy metal-binding peptides of plants. Annu Rev Plant Physiol Plant Mol Biol 41: 553-575.
33. Harada E, Choi YE, Tsuchisaka A, Obata H, Sano H, (2001) Transgenic tobacco plants expressing a rice cysteine synthase gene are tolerant to toxic levels of cadmium. J Plant Physiol 158: 665-661.
34. Zhang Y, Li J, Yu F, Cong L, Wang L, et al. (2006) Cloning and expression analysis of SKn-type dehydrin gene from bean in response to heavy metals. Mol Biotechnol 32: 205-218.
35. Xu J, Zhang YX, Wei W, Han L, Guan ZQ, et al. (2008) BjDHNs confer heavy-metal tolerance in plants. Mol Biotechnol 38: 91-98.
36. Weber H, Borisjuk L, Wobus U, (2005) Molecular physiology of legume seed development. Annu Rev Plant Biol 56: 253-279.
37. Rotundo JL, Westgate ME, (2009) Meta-analysis of environmental effects on soybean seed composition. Field Crop Res 110: 147-156.
38. Ohlrogge JB, Kuo TM, (1984) Control of lipid synthesis during soybean seed development: enzymic and immunochemical assay of acyl carrier protein. Plant Physiol 74: 622-625.
39. Andriotis VM, Kruger NJ, Pike MJ, Smith AM, (2010) Plastidial glycolysis in developing Arabidopsis embryos. New Phytol 185: 649-62.
40. Meyerhof O, Junowicz-Kocholaty R, (1943) The equilibria of isomerase and aldolase and the problem of the phosphorylation of glyceraldehydes phosphate. J Biol Chem 149: 71-92.
41. Meyerhof O, (1945) The origin of the reaction of Harden and Young in cell-free alcoholic fermentation. J Biol Chem 157: 105-120.
42. Plaxton WC, (1996) The organization and regulation of plant glycolysis. Annu Rev Plant Physiol Plant Mol Biol 47: 185-214.
43. Fernie AR, Carrari F, Sweetlove LJ, (2004) Respiratory metabolism: glycolysis the TCA cycle and mitochondrial electron transport. Curr Opin Plant Biol 7: 254-261.
44. Ripp KG, Viitanen PV, Hitz WD, Franceschi VR, (1988) Identification of a membrane protein associated with sucrose transport into cells of developing soybean cotyledons. Plant Physiol 88: 1435-1445.
45. Lemoine R, (2000) Sucrose transporters in plants: update on function and structure. Biochim Biophys Acta 1: 246-262.
46. Williams LE, Lemoine R, Sauer N, (2000) Sugar transporters in higher plants- a diversity of roles and complex regulation. Trends Plant Sci 5: 283-290.
47. Kauppinen S, Siggaard-Andersen M, von Wettstein-Knowles P, (1988) Beta-Ketoacyl-ACP synthase I of Escherichia coli: nucleotide sequence of the fabB gene and identification of the cerulenin binding residue". Carlsberg Res. Commun. 53: 357-370.
48. Hills MJ, (2004) Control of storage-product synthesis in seeds. Curr Opin Plant Biol 7: 302-308.
49. Witt S, Galicia L, Lisec J, Cairns J, Tiessen A, et al. (2012) Metabolic and phenotypic responses of greenhouse-grown maize hybrids to experimentally controlled drought stress. Mol Plant 5: 401-417.
50. Zhang J, Zhang Y, Du Y, Chen S, Tang H, (2011) Dynamic metabonomic responses of tobacco (Nicotiana tabacum) plants to salt stress. J Proteome Res. 10: 1904-1914.
51. Adams CA, Rinne RW, (1981) Interactions of phosphoenolpyruvate carboxylase and pyruvic kinase in developing soybean seeds. Plant Cell Physiol 22: 1011-1021.
52. Reid EE, Thompson P, Lyttle CR, Dennis DT, (1977) Pyruvate dehydrogenase complex from higher plant mitochondria and proplastids. Plant Physiol 59: 842-848.
53. Budde RJ, Fang TK, Randall DD, Miernyk JA, (1991) Acetyl-coenzyme a can regulate activity of the mitochondrial pyruvate dehydrogenase complex in situ. Plant Physiol 95: 131-136.
54. Douce R, Bourguignon J, Neuburger M, Rébeillé F, (2001) The glycine decarboxylase system: a fascinating complex. Trends Plant Sci 6: 167-176.
55. Koyama H, Kawamura A, Kihara T, Hara T, Takita E, et al. (2000) Overexpression of mitochondrial citrate synthase in Arabidopsis thaliana improved growth on a phosphorus-limited soil. Plant Cell Physiol 41: 1030-1037.
56. Komatsu S, Yamamoto A, Nakamura T, Nouri MZ, Nanjo Y, et al. (2011) Comprehensive analysis of mitochondria in roots and hypocotyls of soybean under flooding stress using proteomics and metabolomics techniques. J Proteome Res 10: 3993-4004.