-
1
-
-
0026033076
-
Heat shock-induced interactions of heat shock transcription factor and the human hsp70 promoter examined by in vivo footprinting
-
Abravaya K., Phillips B., Morimoto R.I. Heat shock-induced interactions of heat shock transcription factor and the human hsp70 promoter examined by in vivo footprinting. Mol. Cell. Biol. 1991, 11:586-592.
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 586-592
-
-
Abravaya, K.1
Phillips, B.2
Morimoto, R.I.3
-
2
-
-
0035881744
-
The loop domain of heat shock transcription factor 1 dictates DNA-binding specificity and responses to heat stress
-
Ahn S.G., Liu P.C., Klyachko K., Morimoto R.I., Thiele D.J. The loop domain of heat shock transcription factor 1 dictates DNA-binding specificity and responses to heat stress. Genes Dev. 2001, 15:2134-2145.
-
(2001)
Genes Dev.
, vol.15
, pp. 2134-2145
-
-
Ahn, S.G.1
Liu, P.C.2
Klyachko, K.3
Morimoto, R.I.4
Thiele, D.J.5
-
3
-
-
77954955686
-
Heat shock factors: integrators of cell stress, development and lifespan
-
Akerfelt M., Morimoto R.I., Sistonen L. Heat shock factors: integrators of cell stress, development and lifespan. Nat. Rev. Mol. Cell Biol. 2010, 11:545-555.
-
(2010)
Nat. Rev. Mol. Cell Biol.
, vol.11
, pp. 545-555
-
-
Akerfelt, M.1
Morimoto, R.I.2
Sistonen, L.3
-
4
-
-
79951969175
-
Histone chaperones: modulators of chromatin marks
-
Avvakumov N., Nourani A., Côté J. Histone chaperones: modulators of chromatin marks. Mol. Cell 2011, 41:502-514.
-
(2011)
Mol. Cell
, vol.41
, pp. 502-514
-
-
Avvakumov, N.1
Nourani, A.2
Côté, J.3
-
5
-
-
79955950854
-
Multiple sequence-specific factors generate the nucleosome-depleted region on CLN2 promoter
-
Bai L., Ondracka A., Cross F.R. Multiple sequence-specific factors generate the nucleosome-depleted region on CLN2 promoter. Mol. Cell 2011, 42:465-476.
-
(2011)
Mol. Cell
, vol.42
, pp. 465-476
-
-
Bai, L.1
Ondracka, A.2
Cross, F.R.3
-
6
-
-
39349083915
-
Adapting proteostasis for disease intervention
-
Balch W.E., Morimoto R.I., Dillin A., Kelly J.W. Adapting proteostasis for disease intervention. Science 2008, 319:916-919.
-
(2008)
Science
, vol.319
, pp. 916-919
-
-
Balch, W.E.1
Morimoto, R.I.2
Dillin, A.3
Kelly, J.W.4
-
7
-
-
0025735978
-
Heat shock-regulated transcription in vitro from a reconstituted chromatin template
-
Becker P.B., Rabindran S.K., Wu C. Heat shock-regulated transcription in vitro from a reconstituted chromatin template. Proc. Natl. Acad. Sci. USA 1991, 88:4109-4113.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 4109-4113
-
-
Becker, P.B.1
Rabindran, S.K.2
Wu, C.3
-
8
-
-
0035870560
-
The wing in yeast heat shock transcription factor (HSF) DNA-binding domain is required for full activity
-
Cicero M.P., Hubl S.T., Harrison C.J., Littlefield O., Hardy J.A., Nelson H.C. The wing in yeast heat shock transcription factor (HSF) DNA-binding domain is required for full activity. Nucleic Acids Res. 2001, 29:1715-1723.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1715-1723
-
-
Cicero, M.P.1
Hubl, S.T.2
Harrison, C.J.3
Littlefield, O.4
Hardy, J.A.5
Nelson, H.C.6
-
9
-
-
34548658230
-
Heat shock factor 1 is a powerful multifaceted modifier of carcinogenesis
-
Dai C., Whitesell L., Rogers A.B., Lindquist S. Heat shock factor 1 is a powerful multifaceted modifier of carcinogenesis. Cell 2007, 130:1005-1018.
-
(2007)
Cell
, vol.130
, pp. 1005-1018
-
-
Dai, C.1
Whitesell, L.2
Rogers, A.B.3
Lindquist, S.4
-
10
-
-
0035050787
-
Role of NF-Y in in vivo regulation of the γ-globin gene
-
Duan Z., Stamatoyannopoulos G., Li Q. Role of NF-Y in in vivo regulation of the γ-globin gene. Mol. Cell. Biol. 2001, 21:3083-3095.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 3083-3095
-
-
Duan, Z.1
Stamatoyannopoulos, G.2
Li, Q.3
-
11
-
-
0037512311
-
Distinct strategies to make nucleosomal DNA accessible
-
Fan H.Y., He X., Kingston R.E., Narlikar G.J. Distinct strategies to make nucleosomal DNA accessible. Mol. Cell 2003, 11:1311-1322.
-
(2003)
Mol. Cell
, vol.11
, pp. 1311-1322
-
-
Fan, H.Y.1
He, X.2
Kingston, R.E.3
Narlikar, G.J.4
-
12
-
-
33749134033
-
A dynamic model for replication protein A (RPA) function in DNA processing pathways
-
Fanning E., Klimovich V., Nager A.R. A dynamic model for replication protein A (RPA) function in DNA processing pathways. Nucleic Acids Res. 2006, 34:4126-4137.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 4126-4137
-
-
Fanning, E.1
Klimovich, V.2
Nager, A.R.3
-
13
-
-
70249104647
-
Defining mechanisms that regulate RNA polymerase II transcription in vivo
-
Fuda N.J., Ardehali M.B., Lis J.T. Defining mechanisms that regulate RNA polymerase II transcription in vivo. Nature 2009, 461:186-192.
-
(2009)
Nature
, vol.461
, pp. 186-192
-
-
Fuda, N.J.1
Ardehali, M.B.2
Lis, J.T.3
-
14
-
-
77957252262
-
The heat shock factor family and adaptation to proteotoxic stress
-
Fujimoto M., Nakai A. The heat shock factor family and adaptation to proteotoxic stress. FEBS J. 2010, 277:4112-4125.
-
(2010)
FEBS J.
, vol.277
, pp. 4112-4125
-
-
Fujimoto, M.1
Nakai, A.2
-
15
-
-
57649155181
-
Analysis of HSF4 binding regions reveals its necessity for gene regulation during development and heat shock response in mouse lenses
-
Fujimoto M., Oshima K., Shinkawa T., Wang B.B., Inouye S., Hayashida N., Takii R., Nakai A. Analysis of HSF4 binding regions reveals its necessity for gene regulation during development and heat shock response in mouse lenses. J. Biol. Chem. 2008, 283:29961-29970.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 29961-29970
-
-
Fujimoto, M.1
Oshima, K.2
Shinkawa, T.3
Wang, B.B.4
Inouye, S.5
Hayashida, N.6
Takii, R.7
Nakai, A.8
-
16
-
-
75649144450
-
A novel mouse HSF3 has the potential to activate nonclassical heat-shock genes during heat shock
-
Fujimoto M., Hayashida N., Katoh T., Oshima K., Shinkawa T., Prakasam R., Tan K., Inouye S., Takii R., Nakai A. A novel mouse HSF3 has the potential to activate nonclassical heat-shock genes during heat shock. Mol. Biol. Cell 2010, 21:106-116.
-
(2010)
Mol. Biol. Cell
, vol.21
, pp. 106-116
-
-
Fujimoto, M.1
Hayashida, N.2
Katoh, T.3
Oshima, K.4
Shinkawa, T.5
Prakasam, R.6
Tan, K.7
Inouye, S.8
Takii, R.9
Nakai, A.10
-
18
-
-
0021831222
-
In vivo interactions of RNA polymerase II with genes of Drosophila melanogaster
-
Gilmour D.S., Lis J.T. In vivo interactions of RNA polymerase II with genes of Drosophila melanogaster. Mol. Cell. Biol. 1985, 5:2009-2018.
-
(1985)
Mol. Cell. Biol.
, vol.5
, pp. 2009-2018
-
-
Gilmour, D.S.1
Lis, J.T.2
-
19
-
-
0035920219
-
In vivo formation of a human β-globin locus control region core element requires binding sites for multiple factors including GATA-1, NF-E2, erythroid Kruppel-like factor, and Sp1
-
Goodwin A.J., McInerney J.M., Glander M.A., Pomerantz O., Lowrey C.H. In vivo formation of a human β-globin locus control region core element requires binding sites for multiple factors including GATA-1, NF-E2, erythroid Kruppel-like factor, and Sp1. J. Biol. Chem. 2001, 276:26883-26892.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 26883-26892
-
-
Goodwin, A.J.1
McInerney, J.M.2
Glander, M.A.3
Pomerantz, O.4
Lowrey, C.H.5
-
20
-
-
0029039963
-
A heat shock-responsive domain of human HSF1 that regulates transcription activation domain function
-
Green M., Schuetz T.J., Sullivan E.K., Kingston R.E. A heat shock-responsive domain of human HSF1 that regulates transcription activation domain function. Mol. Cell. Biol. 1995, 15:3354-3362.
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 3354-3362
-
-
Green, M.1
Schuetz, T.J.2
Sullivan, E.K.3
Kingston, R.E.4
-
21
-
-
0023428023
-
Multiple basal elements of a human hsp70 promoter function differently in human and rodent cell lines
-
Greene J.M., Larin Z., Taylor I.C., Prentice H., Gwinn K.A., Kingston R.E. Multiple basal elements of a human hsp70 promoter function differently in human and rodent cell lines. Mol. Cell. Biol. 1987, 7:3646-3655.
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 3646-3655
-
-
Greene, J.M.1
Larin, Z.2
Taylor, I.C.3
Prentice, H.4
Gwinn, K.A.5
Kingston, R.E.6
-
22
-
-
78049440475
-
Chromatin landscape dictates HSF binding to target DNA elements
-
Guertin M.J., Lis J.T. Chromatin landscape dictates HSF binding to target DNA elements. PLoS Genet. 2010, 6:e1001114.
-
(2010)
PLoS Genet.
, vol.6
-
-
Guertin, M.J.1
Lis, J.T.2
-
23
-
-
84859230739
-
Accurate prediction of inducible transcription factor binding intensities in vivo
-
Guertin M.J., Martins A.L., Siepel A., Lis J.T. Accurate prediction of inducible transcription factor binding intensities in vivo. PLoS Genet. 2012, 8:e1002610.
-
(2012)
PLoS Genet.
, vol.8
-
-
Guertin, M.J.1
Martins, A.L.2
Siepel, A.3
Lis, J.T.4
-
24
-
-
49649113678
-
Cellular functions of human RPA1. Multiple roles of domains in replication, repair, and checkpoints
-
Haring S.J., Mason A.C., Binz S.K., Wold M.S. Cellular functions of human RPA1. Multiple roles of domains in replication, repair, and checkpoints. J. Biol. Chem. 2008, 283:19095-19111.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 19095-19111
-
-
Haring, S.J.1
Mason, A.C.2
Binz, S.K.3
Wold, M.S.4
-
25
-
-
0027958045
-
Crystal structure of the DNA binding domain of the heat shock transcription factor
-
Harrison C.J., Bohm A.A., Nelson H.C. Crystal structure of the DNA binding domain of the heat shock transcription factor. Science 1994, 263:224-227.
-
(1994)
Science
, vol.263
, pp. 224-227
-
-
Harrison, C.J.1
Bohm, A.A.2
Nelson, H.C.3
-
26
-
-
84856754084
-
Repair-specific functions of replication protein A
-
Hass C.S., Lam K., Wold M.S. Repair-specific functions of replication protein A. J. Biol. Chem. 2012, 287:3908-3918.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 3908-3918
-
-
Hass, C.S.1
Lam, K.2
Wold, M.S.3
-
27
-
-
77958449033
-
Heat shock factor 1 ameliorates proteotoxicity in cooperation with the transcription factor NFAT
-
Hayashida N., Fujimoto M., Tan K., Prakasam R., Shinkawa T., Li L., Ichikawa H., Takii R., Nakai A. Heat shock factor 1 ameliorates proteotoxicity in cooperation with the transcription factor NFAT. EMBO J. 2010, 29:3459-3469.
-
(2010)
EMBO J.
, vol.29
, pp. 3459-3469
-
-
Hayashida, N.1
Fujimoto, M.2
Tan, K.3
Prakasam, R.4
Shinkawa, T.5
Li, L.6
Ichikawa, H.7
Takii, R.8
Nakai, A.9
-
28
-
-
79952473198
-
Transcription factor cooperativity with heat shock factor 1
-
Hayashida N., Fujimoto M., Nakai A. Transcription factor cooperativity with heat shock factor 1. Transcription 2011, 2:91-94.
-
(2011)
Transcription
, vol.2
, pp. 91-94
-
-
Hayashida, N.1
Fujimoto, M.2
Nakai, A.3
-
29
-
-
0043133760
-
Activation of heat shock genes is not necessary for protection by heat shock transcription factor 1 against cell death due to a single exposure to high temperatures
-
Inouye S., Katsuki K., Izu H., Fujimoto M., Sugahara K., Yamada S., Shinkai Y., Oka Y., Katoh Y., Nakai A. Activation of heat shock genes is not necessary for protection by heat shock transcription factor 1 against cell death due to a single exposure to high temperatures. Mol. Cell. Biol. 2003, 23:5882-5895.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 5882-5895
-
-
Inouye, S.1
Katsuki, K.2
Izu, H.3
Fujimoto, M.4
Sugahara, K.5
Yamada, S.6
Shinkai, Y.7
Oka, Y.8
Katoh, Y.9
Nakai, A.10
-
30
-
-
36349036470
-
Heat shock transcription factor 1 opens chromatin structure of interleukin-6 promoter to facilitate binding of an activator or a repressor
-
Inouye S., Fujimoto M., Nakamura T., Takaki E., Hayashida N., Hai T., Nakai A. Heat shock transcription factor 1 opens chromatin structure of interleukin-6 promoter to facilitate binding of an activator or a repressor. J. Biol. Chem. 2007, 282:33210-33217.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 33210-33217
-
-
Inouye, S.1
Fujimoto, M.2
Nakamura, T.3
Takaki, E.4
Hayashida, N.5
Hai, T.6
Nakai, A.7
-
31
-
-
0033568312
-
ATP-dependent remodeling and acetylation as regulators of chromatin fluidity
-
Kingston R.E., Narlikar G.J. ATP-dependent remodeling and acetylation as regulators of chromatin fluidity. Genes Dev. 1999, 13:2339-2352.
-
(1999)
Genes Dev.
, vol.13
, pp. 2339-2352
-
-
Kingston, R.E.1
Narlikar, G.J.2
-
32
-
-
0023735270
-
Activation in vitro of sequence-specific DNA binding by a human regulatory factor
-
Larson J.S., Schuetz T.J., Kingston R.E. Activation in vitro of sequence-specific DNA binding by a human regulatory factor. Nature 1988, 335:372-375.
-
(1988)
Nature
, vol.335
, pp. 372-375
-
-
Larson, J.S.1
Schuetz, T.J.2
Kingston, R.E.3
-
33
-
-
77950443318
-
NER factors are recruited to active promoters and facilitate chromatin modification for transcription in the absence of exogenous genotoxic attack
-
Le May N., Mota-Fernandes D., Vélez-Cruz R., Iltis I., Biard D., Egly J.M. NER factors are recruited to active promoters and facilitate chromatin modification for transcription in the absence of exogenous genotoxic attack. Mol. Cell 2010, 38:54-66.
-
(2010)
Mol. Cell
, vol.38
, pp. 54-66
-
-
Le May, N.1
Mota-Fernandes, D.2
Vélez-Cruz, R.3
Iltis, I.4
Biard, D.5
Egly, J.M.6
-
34
-
-
11444262202
-
Rapid spontaneous accessibility of nucleosomal DNA
-
Li G., Levitus M., Bustamante C., Widom J. Rapid spontaneous accessibility of nucleosomal DNA. Nat. Struct. Mol. Biol. 2005, 12:46-53.
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 46-53
-
-
Li, G.1
Levitus, M.2
Bustamante, C.3
Widom, J.4
-
35
-
-
33847070442
-
The role of chromatin during transcription
-
Li B., Carey M., Workman J.L. The role of chromatin during transcription. Cell 2007, 128:707-719.
-
(2007)
Cell
, vol.128
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
36
-
-
0032936785
-
A new use for the 'wing' of the 'winged' helix-turn-helix motif in the HSF-DNA cocrystal
-
Littlefield O., Nelson H.C. A new use for the 'wing' of the 'winged' helix-turn-helix motif in the HSF-DNA cocrystal. Nat. Struct. Biol. 1999, 6:464-470.
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 464-470
-
-
Littlefield, O.1
Nelson, H.C.2
-
37
-
-
80054084614
-
Pioneer factors: directing transcriptional regulators within the chromatin environment
-
Magnani L., Eeckhoute J., Lupien M. Pioneer factors: directing transcriptional regulators within the chromatin environment. Trends Genet. 2011, 27:465-474.
-
(2011)
Trends Genet.
, vol.27
, pp. 465-474
-
-
Magnani, L.1
Eeckhoute, J.2
Lupien, M.3
-
38
-
-
43749099875
-
Nucleosome organization in the Drosophila genome
-
Mavrich T.N., Jiang C., Ioshikhes I.P., Li X., Venters B.J., Zanton S.J., Tomsho L.P., Qi J., Glaser R.L., Schuster S.C., et al. Nucleosome organization in the Drosophila genome. Nature 2008, 453:358-362.
-
(2008)
Nature
, vol.453
, pp. 358-362
-
-
Mavrich, T.N.1
Jiang, C.2
Ioshikhes, I.P.3
Li, X.4
Venters, B.J.5
Zanton, S.J.6
Tomsho, L.P.7
Qi, J.8
Glaser, R.L.9
Schuster, S.C.10
-
39
-
-
34249066085
-
PCNA, the maestro of the replication fork
-
Moldovan G.L., Pfander B., Jentsch S. PCNA, the maestro of the replication fork. Cell 2007, 129:665-679.
-
(2007)
Cell
, vol.129
, pp. 665-679
-
-
Moldovan, G.L.1
Pfander, B.2
Jentsch, S.3
-
40
-
-
0023132206
-
Two transcriptional activators, CCAAT-box-binding transcription factor and heat shock transcription factor, interact with a human hsp70 gene promoter
-
Morgan W.D., Williams G.T., Morimoto R.I., Greene J., Kingston R.E., Tjian R. Two transcriptional activators, CCAAT-box-binding transcription factor and heat shock transcription factor, interact with a human hsp70 gene promoter. Mol. Cell. Biol. 1987, 7:1129-1138.
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 1129-1138
-
-
Morgan, W.D.1
Williams, G.T.2
Morimoto, R.I.3
Greene, J.4
Kingston, R.E.5
Tjian, R.6
-
41
-
-
44849094781
-
Proteotoxic stress and inducible chaperone networks in neurodegenerative disease and aging
-
Morimoto R.I. Proteotoxic stress and inducible chaperone networks in neurodegenerative disease and aging. Genes Dev. 2008, 22:1427-1438.
-
(2008)
Genes Dev.
, vol.22
, pp. 1427-1438
-
-
Morimoto, R.I.1
-
42
-
-
0023815651
-
Coordinate changes in heat shock element-binding activity and HSP70 gene transcription rates in human cells
-
Mosser D.D., Theodorakis N.G., Morimoto R.I. Coordinate changes in heat shock element-binding activity and HSP70 gene transcription rates in human cells. Mol. Cell. Biol. 1988, 8:4736-4744.
-
(1988)
Mol. Cell. Biol.
, vol.8
, pp. 4736-4744
-
-
Mosser, D.D.1
Theodorakis, N.G.2
Morimoto, R.I.3
-
43
-
-
78649520018
-
Silencing HSF1 by short hairpin RNA decreases cell proliferation and enhances sensitivity to hyperthermia in human melanoma cell lines
-
Nakamura Y., Fujimoto M., Hayashida N., Takii R., Nakai A., Muto M. Silencing HSF1 by short hairpin RNA decreases cell proliferation and enhances sensitivity to hyperthermia in human melanoma cell lines. J. Dermatol. Sci. 2010, 60:187-192.
-
(2010)
J. Dermatol. Sci.
, vol.60
, pp. 187-192
-
-
Nakamura, Y.1
Fujimoto, M.2
Hayashida, N.3
Takii, R.4
Nakai, A.5
Muto, M.6
-
44
-
-
0037106283
-
A direct nanoflow liquid chromatography-tandem mass spectrometry system for interaction proteomics
-
Natsume T., Yamauchi Y., Nakayama H., Shinkawa T., Yanagida M., Takahashi N., Isobe T. A direct nanoflow liquid chromatography-tandem mass spectrometry system for interaction proteomics. Anal. Chem. 2002, 74:4725-4733.
-
(2002)
Anal. Chem.
, vol.74
, pp. 4725-4733
-
-
Natsume, T.1
Yamauchi, Y.2
Nakayama, H.3
Shinkawa, T.4
Yanagida, M.5
Takahashi, N.6
Isobe, T.7
-
45
-
-
46149108345
-
Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci
-
Petesch S.J., Lis J.T. Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci. Cell 2008, 134:74-84.
-
(2008)
Cell
, vol.134
, pp. 74-84
-
-
Petesch, S.J.1
Lis, J.T.2
-
46
-
-
84855895036
-
Activator-induced spread of poly(ADP-ribose) polymerase promotes nucleosome loss at Hsp70
-
Petesch S.J., Lis J.T. Activator-induced spread of poly(ADP-ribose) polymerase promotes nucleosome loss at Hsp70. Mol. Cell 2012, 45:64-74.
-
(2012)
Mol. Cell
, vol.45
, pp. 64-74
-
-
Petesch, S.J.1
Lis, J.T.2
-
47
-
-
78649346692
-
The heat shock response: life on the verge of death
-
Richter K., Haslbeck M., Buchner J. The heat shock response: life on the verge of death. Mol. Cell 2010, 40:253-266.
-
(2010)
Mol. Cell
, vol.40
, pp. 253-266
-
-
Richter, K.1
Haslbeck, M.2
Buchner, J.3
-
48
-
-
84862806829
-
IL6-mediated suppression of miR-200c directs constitutive activation of inflammatory signaling circuit driving transformation and tumorigenesis
-
Rokavec M., Wu W., Luo J.L. IL6-mediated suppression of miR-200c directs constitutive activation of inflammatory signaling circuit driving transformation and tumorigenesis. Mol. Cell 2012, 45:777-789.
-
(2012)
Mol. Cell
, vol.45
, pp. 777-789
-
-
Rokavec, M.1
Wu, W.2
Luo, J.L.3
-
49
-
-
0042830962
-
Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo
-
Saunders A., Werner J., Andrulis E.D., Nakayama T., Hirose S., Reinberg D., Lis J.T. Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo. Science 2003, 301:1094-1096.
-
(2003)
Science
, vol.301
, pp. 1094-1096
-
-
Saunders, A.1
Werner, J.2
Andrulis, E.D.3
Nakayama, T.4
Hirose, S.5
Reinberg, D.6
Lis, J.T.7
-
50
-
-
39749145198
-
Dynamic regulation of nucleosome positioning in the human genome
-
Schones D.E., Cui K., Cuddapah S., Roh T.Y., Barski A., Wang Z., Wei G., Zhao K. Dynamic regulation of nucleosome positioning in the human genome. Cell 2008, 132:887-898.
-
(2008)
Cell
, vol.132
, pp. 887-898
-
-
Schones, D.E.1
Cui, K.2
Cuddapah, S.3
Roh, T.Y.4
Barski, A.5
Wang, Z.6
Wei, G.7
Zhao, K.8
-
51
-
-
20444403749
-
Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast
-
Sekinger E.A., Moqtaderi Z., Struhl K. Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast. Mol. Cell 2005, 18:735-748.
-
(2005)
Mol. Cell
, vol.18
, pp. 735-748
-
-
Sekinger, E.A.1
Moqtaderi, Z.2
Struhl, K.3
-
52
-
-
0029025078
-
The carboxyl-terminal transactivation domain of heat shock factor 1 is negatively regulated and stress responsive
-
Shi Y., Kroeger P.E., Morimoto R.I. The carboxyl-terminal transactivation domain of heat shock factor 1 is negatively regulated and stress responsive. Mol. Cell. Biol. 1995, 15:4309-4318.
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 4309-4318
-
-
Shi, Y.1
Kroeger, P.E.2
Morimoto, R.I.3
-
53
-
-
80555156087
-
Sub1 and RPA associate with RNA polymerase II at different stages of transcription
-
Sikorski T.W., Ficarro S.B., Holik J., Kim T., Rando O.J., Marto J.A., Buratowski S. Sub1 and RPA associate with RNA polymerase II at different stages of transcription. Mol. Cell 2011, 44:397-409.
-
(2011)
Mol. Cell
, vol.44
, pp. 397-409
-
-
Sikorski, T.W.1
Ficarro, S.B.2
Holik, J.3
Kim, T.4
Rando, O.J.5
Marto, J.A.6
Buratowski, S.7
-
54
-
-
1642618325
-
Modulation of heat shock gene expression by the TAC1 chromatin-modifying complex
-
Smith S.T., Petruk S., Sedkov Y., Cho E., Tillib S., Canaani E., Mazo A. Modulation of heat shock gene expression by the TAC1 chromatin-modifying complex. Nat. Cell Biol. 2004, 6:162-167.
-
(2004)
Nat. Cell Biol.
, vol.6
, pp. 162-167
-
-
Smith, S.T.1
Petruk, S.2
Sedkov, Y.3
Cho, E.4
Tillib, S.5
Canaani, E.6
Mazo, A.7
-
55
-
-
0024282785
-
Yeast heat shock factor is an essential DNA-binding protein that exhibits temperature-dependent phosphorylation
-
Sorger P.K., Pelham H.R. Yeast heat shock factor is an essential DNA-binding protein that exhibits temperature-dependent phosphorylation. Cell 1988, 54:855-864.
-
(1988)
Cell
, vol.54
, pp. 855-864
-
-
Sorger, P.K.1
Pelham, H.R.2
-
56
-
-
0034897667
-
Transcriptional activation domains of human heat shock factor 1 recruit human SWI/SNF
-
Sullivan E.K., Weirich C.S., Guyon J.R., Sif S., Kingston R.E. Transcriptional activation domains of human heat shock factor 1 recruit human SWI/SNF. Mol. Cell. Biol. 2001, 21:5826-5837.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 5826-5837
-
-
Sullivan, E.K.1
Weirich, C.S.2
Guyon, J.R.3
Sif, S.4
Kingston, R.E.5
-
57
-
-
0029834982
-
Replication protein A is a component of a complex that binds the human metallothionein IIA gene transcription start site
-
Tang C.M., Tomkinson A.E., Lane W.S., Wold M.S., Seto E. Replication protein A is a component of a complex that binds the human metallothionein IIA gene transcription start site. J. Biol. Chem. 1996, 271:21637-21644.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 21637-21644
-
-
Tang, C.M.1
Tomkinson, A.E.2
Lane, W.S.3
Wold, M.S.4
Seto, E.5
-
58
-
-
0025780941
-
Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains
-
Taylor I.C., Workman J.L., Schuetz T.J., Kingston R.E. Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains. Genes Dev. 1991, 5:1285-1298.
-
(1991)
Genes Dev.
, vol.5
, pp. 1285-1298
-
-
Taylor, I.C.1
Workman, J.L.2
Schuetz, T.J.3
Kingston, R.E.4
-
59
-
-
1542373742
-
The role of heat shock transcription factor 1 in the genome-wide regulation of the mammalian heat shock response
-
Trinklein N.D., Murray J.I., Hartman S.J., Botstein D., Myers R.M. The role of heat shock transcription factor 1 in the genome-wide regulation of the mammalian heat shock response. Mol. Biol. Cell 2004, 15:1254-1261.
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 1254-1261
-
-
Trinklein, N.D.1
Murray, J.I.2
Hartman, S.J.3
Botstein, D.4
Myers, R.M.5
-
60
-
-
33646153980
-
The structure of the yFACT Pob3-M domain, its interaction with the DNA replication factor RPA, and a potential role in nucleosome deposition
-
VanDemark A.P., Blanksma M., Ferris E., Heroux A., Hill C.P., Formosa T. The structure of the yFACT Pob3-M domain, its interaction with the DNA replication factor RPA, and a potential role in nucleosome deposition. Mol. Cell 2006, 22:363-374.
-
(2006)
Mol. Cell
, vol.22
, pp. 363-374
-
-
VanDemark, A.P.1
Blanksma, M.2
Ferris, E.3
Heroux, A.4
Hill, C.P.5
Formosa, T.6
-
61
-
-
0028500990
-
Solution structure of the DNA-binding domain of Drosophila heat shock transcription factor
-
Vuister G.W., Kim S.J., Orosz A., Marquardt J., Wu C., Bax A. Solution structure of the DNA-binding domain of Drosophila heat shock transcription factor. Nat. Struct. Biol. 1994, 1:605-614.
-
(1994)
Nat. Struct. Biol.
, vol.1
, pp. 605-614
-
-
Vuister, G.W.1
Kim, S.J.2
Orosz, A.3
Marquardt, J.4
Wu, C.5
Bax, A.6
-
62
-
-
77952569347
-
Inducible gene expression: diverse regulatory mechanisms
-
Weake V.M., Workman J.L. Inducible gene expression: diverse regulatory mechanisms. Nat. Rev. Genet. 2010, 11:426-437.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 426-437
-
-
Weake, V.M.1
Workman, J.L.2
-
63
-
-
0025955517
-
Stress-induced oligomerization and chromosomal relocalization of heat-shock factor
-
Westwood J.T., Clos J., Wu C. Stress-induced oligomerization and chromosomal relocalization of heat-shock factor. Nature 1991, 353:822-827.
-
(1991)
Nature
, vol.353
, pp. 822-827
-
-
Westwood, J.T.1
Clos, J.2
Wu, C.3
-
64
-
-
0024282788
-
Isolation of the gene encoding the S. cerevisiae heat shock transcription factor
-
Wiederrecht G., Seto D., Parker C.S. Isolation of the gene encoding the S. cerevisiae heat shock transcription factor. Cell 1988, 54:841-853.
-
(1988)
Cell
, vol.54
, pp. 841-853
-
-
Wiederrecht, G.1
Seto, D.2
Parker, C.S.3
-
65
-
-
0030908093
-
Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
-
Wold M.S. Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Annu. Rev. Biochem. 1997, 66:61-92.
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 61-92
-
-
Wold, M.S.1
-
66
-
-
0021272985
-
Activating protein factor binds in vitro to upstream control sequences in heat shock gene chromatin
-
Wu C. Activating protein factor binds in vitro to upstream control sequences in heat shock gene chromatin. Nature 1984, 311:81-84.
-
(1984)
Nature
, vol.311
, pp. 81-84
-
-
Wu, C.1
-
67
-
-
0029564954
-
Heat shock transcription factors: structure and regulation
-
Wu C. Heat shock transcription factors: structure and regulation. Annu. Rev. Cell Dev. Biol. 1995, 11:441-469.
-
(1995)
Annu. Rev. Cell Dev. Biol.
, vol.11
, pp. 441-469
-
-
Wu, C.1
-
68
-
-
0012111663
-
Human HSP70 promoter contains at least two distinct regulatory domains
-
Wu B.J., Kingston R.E., Morimoto R.I. Human HSP70 promoter contains at least two distinct regulatory domains. Proc. Natl. Acad. Sci. USA 1986, 83:629-633.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 629-633
-
-
Wu, B.J.1
Kingston, R.E.2
Morimoto, R.I.3
-
69
-
-
22744432660
-
Genome-scale identification of nucleosome positions in S. cerevisiae
-
Yuan G.C., Liu Y.J., Dion M.F., Slack M.D., Wu L.F., Altschuler S.J., Rando O.J. Genome-scale identification of nucleosome positions in S. cerevisiae. Science 2005, 309:626-630.
-
(2005)
Science
, vol.309
, pp. 626-630
-
-
Yuan, G.C.1
Liu, Y.J.2
Dion, M.F.3
Slack, M.D.4
Wu, L.F.5
Altschuler, S.J.6
Rando, O.J.7
-
70
-
-
80455144479
-
Pioneer transcription factors: establishing competence for gene expression
-
Zaret K.S., Carroll J.S. Pioneer transcription factors: establishing competence for gene expression. Genes Dev. 2011, 25:2227-2241.
-
(2011)
Genes Dev.
, vol.25
, pp. 2227-2241
-
-
Zaret, K.S.1
Carroll, J.S.2
-
71
-
-
68249142923
-
Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo
-
Zhang Y., Moqtaderi Z., Rattner B.P., Euskirchen G., Snyder M., Kadonaga J.T., Liu X.S., Struhl K. Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo. Nat. Struct. Mol. Biol. 2009, 16:847-852.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 847-852
-
-
Zhang, Y.1
Moqtaderi, Z.2
Rattner, B.P.3
Euskirchen, G.4
Snyder, M.5
Kadonaga, J.T.6
Liu, X.S.7
Struhl, K.8
-
72
-
-
78650250161
-
Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells
-
Zobeck K.L., Buckley M.S., Zipfel W.R., Lis J.T. Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells. Mol. Cell 2010, 40:965-975.
-
(2010)
Mol. Cell
, vol.40
, pp. 965-975
-
-
Zobeck, K.L.1
Buckley, M.S.2
Zipfel, W.R.3
Lis, J.T.4
-
73
-
-
0029055176
-
Multiple layers of regulation of human heat shock transcription factor 1
-
Zuo J., Rungger D., Voellmy R. Multiple layers of regulation of human heat shock transcription factor 1. Mol. Cell. Biol. 1995, 15:4319-4330.
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 4319-4330
-
-
Zuo, J.1
Rungger, D.2
Voellmy, R.3
|