-
1
-
-
65649110867
-
Genome wide signatures of positive selection: The comparison of independent samples and the identification of regions associated to traits
-
Barendse W, Harrison BE, Bunch RJ, Thomas MB, Turner LB. 2009. Genome wide signatures of positive selection: the comparison of independent samples and the identification of regions associated to traits.BMC Genomics 10: 178. http://dx. doi.org/10.1186/1471-2164-10-178.
-
(2009)
BMC Genomics
, vol.10
, Issue.178
-
-
Barendse, W.1
Harrison, B.E.2
Bunch, R.J.3
Thomas, M.B.4
Turner, L.B.5
-
2
-
-
63149172767
-
Genomewide selection for rapid introgression of exotic germplasm in maize
-
Bernardo R. 2009. Genomewide selection for rapid introgression of exotic germplasm in maize. Crop Science 49: 419-425.
-
(2009)
Crop Science
, vol.49
, pp. 419-425
-
-
Bernardo, R.1
-
3
-
-
77749298694
-
Genomewide selection with minimal crossing in selfpollinated crops
-
Bernardo R. 2010. Genomewide selection with minimal crossing in selfpollinated crops. Crop Science 50: 624-627.
-
(2010)
Crop Science
, vol.50
, pp. 624-627
-
-
Bernardo, R.1
-
4
-
-
34548176501
-
Prospects for genomewide selection for quantitative trait in maize
-
Bernardo R, Yu J. 2007. Prospects for genomewide selection for quantitative trait in maize. Crop Science 47: 1082-1090.
-
(2007)
Crop Science
, vol.47
, pp. 1082-1090
-
-
Bernardo, R.1
Yu, J.2
-
5
-
-
84868008127
-
Genomic selection for carrierstate resistance in chicken commercial lines
-
Calenge F, Legarra A, Beaumont C. 2011. Genomic selection for carrierstate resistance in chicken commercial lines. BMC Proceedings 5 (Suppl. l4): S24. http://dx.doi.org/10.1186/1753-6561-5-S4-S24.
-
(2011)
BMC Proceedings
, vol.5
, Issue.SUPPL. 14
-
-
Calenge, F.1
Legarra, A.2
Beaumont, C.3
-
7
-
-
36849052387
-
Accuracy of breeding values when using and ignoring the polygenic effect in genomic breeding value estimation with a marker density of one SNP per cM
-
Calus MPL, Veerkamp RF. 2007. Accuracy of breeding values when using and ignoring the polygenic effect in genomic breeding value estimation with a marker density of one SNP per cM. Journal of Animal Breeding and Genetics 124: 362-368.
-
(2007)
Journal of Animal Breeding and Genetics
, vol.124
, pp. 362-368
-
-
Mpl, C.1
Veerkamp, R.F.2
-
8
-
-
79959329326
-
Genomic breeding value prediction using three Bayesian methods and application to reduced density marker panels
-
Cleveland MA, Forni S, Deeb N, Maltecca C. 2010. Genomic breeding value prediction using three Bayesian methods and application to reduced density marker panels. BMC Proceedings 4 (Suppl 1): S6. http://dx.doi.org/10.1186/1753- 6561-4-S1-S6.
-
(2010)
BMC Proceedings
, vol.4 SUPPL. 1
-
-
Cleveland, M.A.1
Forni, S.2
Deeb, N.3
Maltecca, C.4
-
9
-
-
78649325488
-
Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers
-
Crossa J, Campos G, de L, Pe'rez P, et al. 2010. Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers. Genetics 186: 713-724.
-
(2010)
Genetics
, vol.186
, pp. 713-724
-
-
Crossa, J.1
Campos, G.2
De, L.3
Perez, P.4
-
10
-
-
67249092136
-
Epistatic models improve prediction of performance in corn
-
Dudley JW, Johnson GR. 2009. Epistatic models improve prediction of performance in corn. Crop Science 49: 763-770.
-
(2009)
Crop Science
, vol.49
, pp. 763-770
-
-
Dudley, J.W.1
Johnson, G.R.2
-
12
-
-
84971185409
-
The correlation between relatives on the supposition on Mendelian inheritance
-
Fisher RA. 1918. The correlation between relatives on the supposition on Mendelian inheritance. Transactions of the Royal Society of Edinburgh 52: 399-433.
-
(1918)
Transactions of the Royal Society of Edinburgh
, vol.52
, pp. 399-433
-
-
Fisher, R.A.1
-
13
-
-
0242286593
-
Population structure and its effect on haplotype diversity and linkage disequilibrium surrounding the xa5 locus of rice (Oryza sativa L.)
-
Garris AJ, McCouch SR, Kresovich S. 2003. Population structure and its effect on haplotype diversity and linkage disequilibrium surrounding the xa5 locus of rice (Oryza sativa L.) Genetics 165: 759-769.
-
(2003)
Genetics
, vol.165
, pp. 759-769
-
-
Garris, A.J.1
McCouch, S.R.2
Kresovich, S.3
-
14
-
-
0037705665
-
The lowdown on linkage disequilibrium
-
Gaut BS, Long AD. 2003. The lowdown on linkage disequilibrium. The Plant Cell 15: 1502-1506.
-
(2003)
The Plant Cell
, vol.15
, pp. 1502-1506
-
-
Gaut, B.S.1
Long, A.D.2
-
16
-
-
67349287476
-
Genomic selection: Prediction of accuracy and maximization of long term selection
-
Goddard M. 2009. Genomic selection: prediction of accuracy and maximization of long term selection. Genetica 136: 245-257.
-
(2009)
Genetica
, vol.136
, pp. 245-257
-
-
Goddard, M.1
-
18
-
-
17844390585
-
Nucleotide diversity, linkage disequilibrium and adaptive variation in natural populations of loblolly pine
-
10-14 January 2004, San Diego, CA W3
-
Gonza'lez-Marti'nez SC, Brown GR, Ersoz E, et al. 2004. Nucleotide diversity, linkage disequilibrium and adaptive variation in natural populations of loblolly pine. Plant & Animal Genomes XII Conference, 10-14 January 2004, San Diego, CA, W3.
-
(2004)
Plant & Animal Genomes XII Conference
-
-
Gonzalez-Martinez, S.C.1
Brown, G.R.2
Ersoz, E.3
-
19
-
-
85009123253
-
Genomic selection for growth traits in Eucalyptus: Accuracy within and across breeding populations
-
Grattapaglia D, Resende MDV, Resende MR, et al. 2011. Genomic selection for growth traits in Eucalyptus: accuracy within and across breeding populations. BMC Proceedings 5 (Suppl. 7): O16.
-
(2011)
BMC Proceedings
, vol.5 SUPPL. 7
-
-
Grattapaglia, D.1
Mdv, R.2
Resende, M.R.3
-
20
-
-
84860346263
-
Evaluation of genomewide selection efficiency in maize nested association mapping populations
-
Guo Z, Tucker DM, Lu J, Kishore V, Gay G. 2011. Evaluation of genomewide selection efficiency in maize nested association mapping populations. Theoretical and Applied Genetics 124: 261-275.
-
(2011)
Theoretical and Applied Genetics
, vol.124
, pp. 261-275
-
-
Guo, Z.1
Tucker, D.M.2
Lu, J.3
Kishore, V.4
Gay, G.5
-
21
-
-
17844404294
-
Linkage disequilibrium and association studies in higher plants: Present status and future prospects
-
Gupta PK, Pawan S, Kulwal PL. 2005. Linkage disequilibrium and association studies in higher plants: present status and future prospects. Plant Molecular Biology 57: 461-485.
-
(2005)
Plant Molecular Biology
, vol.57
, pp. 461-485
-
-
Gupta, P.K.1
Pawan, S.2
Kulwal, P.L.3
-
22
-
-
67849094221
-
Genomic selection using lowdensity marker panels
-
Habier D, Fernando RL, Dekkers CM. 2009. Genomic selection using lowdensity marker panels. Genetics 182: 343-353.
-
(2009)
Genetics
, vol.182
, pp. 343-353
-
-
Habier, D.1
Fernando, R.L.2
Dekkers, C.M.3
-
23
-
-
67649203222
-
Genomic selection in New Zealand and the implications for national genetic evaluation
-
16-19 June 2008 Niagara Falls, Canada
-
Harris BL, Johnson DL, Spelman RL. 2008. Genomic selection in New Zealand and the implications for national genetic evaluation. Proceedings of the Interbull Meeting, 16-19 June 2008, Niagara Falls, Canada.
-
(2008)
Proceedings of the Interbull Meeting
-
-
Harris, B.L.1
Johnson, D.L.2
Spelman, R.L.3
-
27
-
-
80053633450
-
Genomic selection accuracy for grain quality traits in biparental wheat populations
-
Heffner EL, Jannink J-L, Iwata H, Souza E, Sorrells ME. 2011. Genomic selection accuracy for grain quality traits in biparental wheat populations. Crop Science 51: 2597-2606.
-
(2011)
Crop Science
, vol.51
, pp. 2597-2606
-
-
Heffner, E.L.1
Jannink, J.-L.2
Iwata, H.3
Souza, E.4
Sorrells, M.E.5
-
28
-
-
0016704147
-
Best linear unbiased estimation prediction under selection model
-
Selection Model. Biometrics 31 423
-
Henderson CR. 1975. Best linear unbiased estimation prediction under a Selection Model. Biometrics 31 423
-
(1975)
Biometrics
, vol.31
, pp. 423
-
-
Henderson, C.R.1
-
29
-
-
78951473775
-
Genomic value prediction for quantitative traits under the epistatic model
-
Hu Z, Li Y, Song X, et al. 2011. Genomic value prediction for quantitative traits under the epistatic model. BMC Genetics 12: 15. http://dx.doi.org/10.1186/1471-2156-12-15.
-
(2011)
BMC Genetics
, vol.12
, pp. 15
-
-
Hu, Z.1
Li, Y.2
Song, X.3
-
30
-
-
84868018634
-
Genomic selection in loblolly pine - From lab to field
-
Isik F, Whetten R, Zapata-Valenzuela J, Ogut F, McKeand S. 2011. Genomic selection in loblolly pine - from lab to field. BMC Proceedings 5 (Suppl. 7): I8.
-
(2011)
BMC Proceedings
, vol.5 SUPPL. 7
-
-
Isik, F.1
Whetten, R.2
Zapata-Valenzuela, J.3
Ogut, F.4
McKeand, S.5
-
31
-
-
39749132326
-
Genotype Matrix Mapping (GMM): Searching for QTL interactions in genetic variation in complex traits
-
Isobe S, Nakaya A, Tabata S. 2007. Genotype Matrix Mapping (GMM): searching for QTL interactions in genetic variation in complex traits. DNA Research 14: 217-225.
-
(2007)
DNA Research
, vol.14
, pp. 217-225
-
-
Isobe, S.1
Nakaya, A.2
Tabata, S.3
-
32
-
-
77953929301
-
Marker genotype imputation in a low-marker-density panel with a high-marker density reference panel: Accuracy evaluation in barley breeding lines
-
Iwata H, Jannink J-L. 2010. Marker genotype imputation in a low-marker-density panel with a high-marker density reference panel: accuracy evaluation in barley breeding lines. Crop Science 50: 1269-1278.
-
(2010)
Crop Science
, vol.50
, pp. 1269-1278
-
-
Iwata, H.1
Jannink, J.-L.2
-
33
-
-
79961180831
-
Accuracy of genomic selection prediction in barley breeding programs: A simulation study based on the real single nucleotide polymorphism data of barley breeding lines
-
Iwata H, Jannink J-L. 2011. Accuracy of genomic selection prediction in barley breeding programs: a simulation study based on the real single nucleotide polymorphism data of barley breeding lines. Crop Science 51: 1915-1927.
-
(2011)
Crop Science
, vol.51
, pp. 1915-1927
-
-
Iwata, H.1
Jannink, J.-L.2
-
34
-
-
78049395924
-
Dynamics of long-term genomic selection
-
Jannink J-L. 2010. Dynamics of long-term genomic selection. Genetics Selection Evolution 42: 35.
-
(2010)
Genetics Selection Evolution
, vol.42
, pp. 35
-
-
Jannink, J.-L.1
-
37
-
-
34547096037
-
Estimation of multilocus linkage disequilibria in diploid populations with dominant markers
-
Li Y, Li Y, Wu S, et al. 2007. Estimation of multilocus linkage disequilibria in diploid populations with dominant markers. Genetics 176: 1811-1821.
-
(2007)
Genetics
, vol.176
, pp. 1811-1821
-
-
Li, Y.1
Li, Y.2
Wu, S.3
-
38
-
-
70949108214
-
Accuracy of genotypic value predictions for marker-based selection in biparental plant populations
-
Lorenzana RE, Bernardo R. 2009. Accuracy of genotypic value predictions for marker-based selection in biparental plant populations. Theoretical and Applied Genetics 120: 151-161.
-
(2009)
Theoretical and Applied Genetics
, vol.120
, pp. 151-161
-
-
Lorenzana, R.E.1
Bernardo, R.2
-
39
-
-
72449137120
-
The accuracy of genomic selection in Norwegian red cattle assessed by cross-validation
-
Luan T, Woolliams JA, Lien S, Kent M, Svendsen M, Meuwissen TH. 2009. The accuracy of genomic selection in Norwegian red cattle assessed by cross-validation. Genetics 183: 1119-1126.
-
(2009)
Genetics
, vol.183
, pp. 1119-1126
-
-
Luan, T.1
Woolliams, J.A.2
Lien, S.3
Kent, M.4
Svendsen, M.5
Meuwissen, T.H.6
-
40
-
-
29244435707
-
Epistasis for fitnessrelated quantitative traits in Arabidopsis thaliana grown in the field and in the greenhouse
-
Malmberg RL, Held S, Waits A, Mauricio R. 2005. Epistasis for fitnessrelated quantitative traits in Arabidopsis thaliana grown in the field and in the greenhouse. Genetics 171: 2013-2027.
-
(2005)
Genetics
, vol.171
, pp. 2013-2027
-
-
Malmberg, R.L.1
Held, S.2
Waits, A.3
Mauricio, R.4
-
41
-
-
70349197524
-
Genomewide selection and marker-assisted recurrent selection in doubled haploid versus F2 populations
-
Mayor PJ, Bernardo R. 2009. Genomewide selection and marker-assisted recurrent selection in doubled haploid versus F2 populations. Crop Science 49: 1719-1725.
-
(2009)
Crop Science
, vol.49
, pp. 1719-1725
-
-
Mayor, P.J.1
Bernardo, R.2
-
42
-
-
15244349562
-
Gene actions of QTLs affecting several agronomic traits resolved in a recombinant inbred rice population and two backcross populations
-
Mei HW, Li KZ, Shu QY, et al. 2005. Gene actions of QTLs affecting several agronomic traits resolved in a recombinant inbred rice population and two backcross populations. Theoretical and Applied Genetics 110: 649-659.
-
(2005)
Theoretical and Applied Genetics
, vol.110
, pp. 649-659
-
-
Mei, H.W.1
Li, K.Z.2
Shu, Q.Y.3
-
43
-
-
36849079350
-
Genomic selection marker assisted selection on Genome Wide Scale
-
Meuwissen THE. 2007. Genomic selection marker assisted selection on Genome Wide Scale. Journal Of Animal Breeding Genetics 124321-322
-
(2007)
Journal of Animal Breeding and Genetics
, vol.124
, pp. 321-322
-
-
The, M.1
-
44
-
-
0035045051
-
Prediction of total genetic value using genome-wide dense marker maps
-
Meuwissen THE, Hayes BJ, Goddard ME. 2001. Prediction of total genetic value using genome-wide dense marker maps. Genetics 157: 1819-1829.
-
(2001)
Genetics
, vol.157
, pp. 1819-1829
-
-
The, M.1
Hayes, B.J.2
Goddard, M.E.3
-
45
-
-
33846874137
-
Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers
-
Miller MR, Dunham JP, Amores A, Cresko WA, Johnson EA. 2007. Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Genome Research 17: 240-248.
-
(2007)
Genome Research
, vol.17
, pp. 240-248
-
-
Miller, M.R.1
Dunham, J.P.2
Amores, A.3
Cresko, W.A.4
Johnson, E.A.5
-
46
-
-
77949812757
-
A comparison of five methods to predict genomic breeding values of dairy bulls from genome-wide SNP markers
-
Moser G, Tier B, Crump RE, Khatkar MS, Raadsma HW. 2009. A comparison of five methods to predict genomic breeding values of dairy bulls from genome-wide SNP markers. Genetics Selection Evolution 41: 56.
-
(2009)
Genetics Selection Evolution
, vol.41
, pp. 56
-
-
Moser, G.1
Tier, B.2
Crump, R.E.3
Khatkar, M.S.4
Raadsma, H.W.5
-
47
-
-
80054754496
-
Accuracy of genomic breeding values for residual feed intake in crossbred beef cattle
-
Mujibi FDN, Nkumah JD, Durunna ON, et al. 2011. Accuracy of genomic breeding values for residual feed intake in crossbred beef cattle. Journal of Animal Science 89: 3353-3361.
-
(2011)
Journal of Animal Science
, vol.89
, pp. 3353-3361
-
-
Fdn, M.1
Nkumah, J.D.2
Durunna, O.N.3
-
48
-
-
0041419283
-
Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci
-
Palaisa KA, Morgante M, Williams M, Rafalski A. 2003. Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci. The Plant Cell 15: 1795-1806.
-
(2003)
The Plant Cell
, vol.15
, pp. 1795-1806
-
-
Palaisa, K.A.1
Morgante, M.2
Williams, M.3
Rafalski, A.4
-
49
-
-
67849083102
-
Ridge regression and extensions for genomewide selection in maize
-
Piepho HP. 2009. Ridge regression and extensions for genomewide selection in maize. Crop Science 49: 1165-1176.
-
(2009)
Crop Science
, vol.49
, pp. 1165-1176
-
-
Piepho, H.P.1
-
52
-
-
85009061345
-
Stability of genomic selection prediction models across ages and environments
-
Resende MFR Jr, Valle PRM, Acosta JJ, Resende MDV, Grattapaglia D, Kirst M. 2011. Stability of genomic selection prediction models across ages and environments. BMC Proceedings 5 (Suppl. 7): O14.
-
(2011)
BMC Proceedings
, vol.5 SUPPL. 7
-
-
Resende Jr., M.F.R.1
Prm, V.2
Acosta, J.J.3
Mdv, R.4
Grattapaglia, D.5
Kirst, M.6
-
53
-
-
77950961027
-
Impact of reduced marker set estimation of genomic relationship matrices on genomic selection for feed efficiency in Angus cattle
-
doi.org/10.1186/1471-2156-11-24
-
Rolf MM, Taylor JF, Schnabel RD, et al. 2010. Impact of reduced marker set estimation of genomic relationship matrices on genomic selection for feed efficiency in Angus cattle. BMC Genetics 11: 24. http://dx. doi.org/10.1186/ 1471-2156-11-24.
-
(2010)
BMC Genetics
, vol.11
, Issue.24
-
-
Rolf, M.M.1
Taylor, J.F.2
Schnabel, R.D.3
-
55
-
-
77949772292
-
Gene-environment-wide association studies: Emerging approaches
-
Thomas D. 2010. Gene-environment-wide association studies: emerging approaches. Nature Reviews Genetics 11: 259-272.
-
(2010)
Nature Reviews Genetics
, vol.11
, pp. 259-272
-
-
Thomas, D.1
-
56
-
-
72649107331
-
Genomic selection in admixed and crossbred populations
-
Toosi A, Fernando RL, Dekkers JCM. 2009. Genomic selection in admixed and crossbred populations. Journal of Animal Science 88: 32-46.
-
(2009)
Journal of Animal Science
, vol.88
, pp. 32-46
-
-
Toosi, A.1
Fernando, R.L.2
Jcm, D.3
-
58
-
-
58349092764
-
Invited review: Reliability of genomic predictions for North American Holsein bulls
-
Van Raden PM, Van Tassell CP, Wiggans GR, et al. 2009. Invited review: reliability of genomic predictions for North American Holsein bulls. Journal of Dairy Science 92: 16-24.
-
(2009)
Journal of Dairy Science
, vol.92
, pp. 16-24
-
-
Van Raden, P.M.1
Van Tassell, C.P.2
Wiggans, G.R.3
-
59
-
-
0026813931
-
Estimated breeding values for meat characteristics of crossbred cattle with an animal model
-
Van Vleck LD, Hakim AF, Cundiff LV, Koch RM, Crouse JD, Boldman KG. 1992. Estimated breeding values for meat characteristics of crossbred cattle with an animal model. Journal of Animal Science 70:363-371.
-
(1992)
Journal of Animal Science
, vol.70
, pp. 363-371
-
-
Van Vleck, L.D.1
Hakim, A.F.2
Cundiff, L.V.3
Koch, R.M.4
Crouse, J.D.5
Boldman, K.G.6
-
61
-
-
84857629413
-
-
Department of Statistics, North Carolina State University, Raleigh, NC USA
-
Wang S, Basten CJ, Zeng Z-B. 2011. Windows QTL Cartographer 2.5. Department of Statistics, North Carolina State University, Raleigh, NC USA.
-
(2011)
Windows QTL Cartographer 2.5
-
-
Wang, S.1
Basten, C.J.2
Zeng, Z.-B.3
-
62
-
-
34249808800
-
Animal breeding and the black box of biology
-
van der Werf J. 2007. Animal breeding and the black box of biology. Animal Breeding and Genetics 124: 101.
-
(2007)
Animal Breeding and Genetics
, vol.124
, pp. 101
-
-
Van Der Werf, J.1
-
64
-
-
79952661182
-
Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model
-
Wolc A, Stricker C, Arango J, et al. 2011. Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model. Genetics Selection Evolution 43: 5.
-
(2011)
Genetics Selection Evolution
, vol.43
, pp. 5
-
-
Wolc, A.1
Stricker, C.2
Arango, J.3
-
65
-
-
43349106548
-
Genomewide selection in oil palm: Increasing selection gain per unit time and cost with small populations
-
Wong CK, Bernardo R. 2008. Genomewide selection in oil palm: increasing selection gain per unit time and cost with small populations. Theoretical and Applied Genetics 116: 815-824.
-
(2008)
Theoretical and Applied Genetics
, vol.116
, pp. 815-824
-
-
Wong, C.K.1
Bernardo, R.2
-
66
-
-
34249023066
-
Genomewide analysis of epistatic effects for quantitative traits in barley
-
Xu S, Jia Z. 2007. Genomewide analysis of epistatic effects for quantitative traits in barley. Genetics 175: 1955-1963.
-
(2007)
Genetics
, vol.175
, pp. 1955-1963
-
-
Xu, S.1
Jia, Z.2
-
67
-
-
42449139080
-
Marker-assisted selection in plant breeding: From publication to practice
-
Xu Y, Crouch JH. 2008. Marker-assisted selection in plant breeding: from publication to practice. Crop Science 48: 391-407.
-
(2008)
Crop Science
, vol.48
, pp. 391-407
-
-
Xu, Y.1
Crouch, J.H.2
-
68
-
-
67849114172
-
Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: A barley case study
-
Zhong S, Dekkers JCM, Fernando RL, Jannink J-L. 2009. Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: a barley case study. Genetics 182: 355-364.
-
(2009)
Genetics
, vol.182
, pp. 355-364
-
-
Zhong, S.1
Jcm, D.2
Fernando, R.L.3
Jannink, J.-L.4
|