Prediction of flavin mono-nucleotide binding sites using modified PSSM profile and ensemble support vector machine

Computers in Biology and Medicine

Volumn 42, Issue 11, 2012, Pages 1053-1059

  Wang, Xia ^a   Mi, Gang ^a   Wang, Cuicui ^a   Zhang, Yongqing ^a   Li, Juan ^a   Guo, Yanzhi ^a   Pu, Xuemei ^a   Li, Menglong ^a  

^a SICHUAN UNIVERSITY   (China)

Author keywords

Binding site prediction; Ensemble classifier; Flavin mono nucleotide (FMN); Position specific score matrix (PSSM); Support vector machine (SVM)

Indexed keywords

AMINO ACID SEQUENCE; BIOLOGICAL PROCESS; DATA SETS; ENSEMBLE CLASSIFIERS; FLAVIN MONO-NUCLEOTIDE (FMN); IMBALANCED DATA; POSITION SPECIFIC SCORE MATRIX (PSSM);

AMINO ACIDS; BINDING SITES; DATA PROCESSING; FORECASTING; NUCLEOTIDES;

SUPPORT VECTOR MACHINES;

FLAVINE MONONUCLEOTIDE;

ARTICLE; BINDING SITE; DATA ANALYSIS; POSITION SPECIFIC SCORE MATRIX; PREDICTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; SEQUENCE ANALYSIS; SUPPORT VECTOR MACHINE;

BINDING SITES; COMPUTATIONAL BIOLOGY; DATA MINING; DATABASES, FACTUAL; FLAVIN MONONUCLEOTIDE; MODELS, MOLECULAR; POSITION-SPECIFIC SCORING MATRICES; REPRODUCIBILITY OF RESULTS; ROC CURVE; STATISTICS AS TOPIC; SUPPORT VECTOR MACHINES;

EID: 84867727889     PISSN: 00104825     EISSN: 18790534     Source Type: Journal    
DOI: 10.1016/j.compbiomed.2012.08.005     Document Type: Article

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