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Volumn 51, Issue 41, 2012, Pages 8189-8207

The -Cys-X1-X2-Cys- motif of reduced glutaredoxins adopts a consensus structure that explains the low p K a of its catalytic cysteine

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; CONFORMATIONS; ESCHERICHIA COLI; HYDROGEN BONDS; MOLECULAR DYNAMICS; NUCLEAR MAGNETIC RESONANCE; VIRUSES;

EID: 84867507044     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi3006576     Document Type: Article
Times cited : (5)

References (80)
  • 1
    • 64549106959 scopus 로고    scopus 로고
    • Mechanistic and Kinetic Details of Catalysis of Thiol-Disulfide Exchange by Glutaredoxins and Potential Mechanisms of Regulation
    • Gallogly, M. M., Starke, D. W., and Mieyal, J. J. (2009) Mechanistic and Kinetic Details of Catalysis of Thiol-Disulfide Exchange by Glutaredoxins and Potential Mechanisms of Regulation Antioxid. Redox Signaling 11, 1059-1081
    • (2009) Antioxid. Redox Signaling , vol.11 , pp. 1059-1081
    • Gallogly, M.M.1    Starke, D.W.2    Mieyal, J.J.3
  • 2
    • 0024393963 scopus 로고
    • Thioredoxin and Glutaredoxin
    • Holmgren, A. (1989) Thioredoxin and Glutaredoxin J. Biol. Chem. 264, 13963-13966
    • (1989) J. Biol. Chem. , vol.264 , pp. 13963-13966
    • Holmgren, A.1
  • 3
    • 33645115156 scopus 로고    scopus 로고
    • Similarities and differences in the thioredoxin superfamilly
    • Carvalho, A. P., Fernandes, P. A., and Ramos, M. J. (2006) Similarities and differences in the thioredoxin superfamilly Prog. Biophys. Mol. Biol. 91, 229-248
    • (2006) Prog. Biophys. Mol. Biol. , vol.91 , pp. 229-248
    • Carvalho, A.P.1    Fernandes, P.A.2    Ramos, M.J.3
  • 5
    • 0027238801 scopus 로고
    • Thioltransferase is a specific glutathionyl mixed disulfide oxidoreductase
    • Gravina, S. A. and Mieyal, J. J. (1993) Thioltransferase is a Specific Glutathionyl Mixed Disulfide Oxidoreductase Biochemistry 32, 3368-3376 (Pubitemid 23126904)
    • (1993) Biochemistry , vol.32 , Issue.13 , pp. 3368-3376
    • Gravina, S.A.1    Mieyal, J.J.2
  • 6
    • 49449109504 scopus 로고    scopus 로고
    • The multiple functions of the thiol-based electron flow pathways of Escherichia coli: Eternal concepts revisited
    • Vlamis-Gardikas, A. (2008) The multiple functions of the thiol-based electron flow pathways of Escherichia coli: Eternal concepts revisited Biochim. Biophys. Acta 1780, 1170-1200
    • (2008) Biochim. Biophys. Acta , vol.1780 , pp. 1170-1200
    • Vlamis-Gardikas, A.1
  • 7
    • 0025788552 scopus 로고
    • Identification and characterization of the functional amino acids at the active center of pig liver thioltransferase by site-directed mutagenesis
    • Yang, Y. and Wells, W. W. (1991) Identification and Characterization of the Functional Amino Acids at the Active Center of Pig Liver Thioltransferase by Site-directed Mutagenesis J. Biol. Chem. 266, 12759-12765 (Pubitemid 21907160)
    • (1991) Journal of Biological Chemistry , vol.266 , Issue.19 , pp. 12759-12765
    • Yang, Y.1    Wells, W.W.2
  • 8
    • 0025887464 scopus 로고
    • Thioltransferase in Human Red Blood Cells: Kinetics and Equilibrium
    • Mieyal, J. J., Starke, D. W., Gravina, S. A., and Hocevar, B. A. (1991) Thioltransferase in Human Red Blood Cells: Kinetics and Equilibrium Biochemistry 30, 8883-8891
    • (1991) Biochemistry , vol.30 , pp. 8883-8891
    • Mieyal, J.J.1    Starke, D.W.2    Gravina, S.A.3    Hocevar, B.A.4
  • 9
    • 0035816224 scopus 로고    scopus 로고
    • Structure, dynamics and electrostatics of the active site of glutaredoxin 3 from Escherichia coli: Comparison with functionally related proteins
    • DOI 10.1006/jmbi.2001.4767
    • Foloppe, N., Sagemark, J., Nordstrand, K., Berndt, K. D., and Nilsson, L. (2001) Structure, Dynamics and Electrostatics of the Active Site of Glutaredoxin 3 from Escherichia coli: Comparison with Functionally Related Proteins J. Mol. Biol. 310, 449-470 (Pubitemid 32664879)
    • (2001) Journal of Molecular Biology , vol.310 , Issue.2 , pp. 449-470
    • Foloppe, N.1    Sagemark, J.2    Nordstrand, K.3    Berndt, K.D.4    Nilsson, L.5
  • 11
    • 0029165589 scopus 로고
    • Thioredoxin: A fold for all reasons
    • Martin, J. L. (1995) Thioredoxin: A fold for all reasons Structure 3, 245-250
    • (1995) Structure , vol.3 , pp. 245-250
    • Martin, J.L.1
  • 12
    • 0029159834 scopus 로고
    • The structure of a reduced mutant T4 glutaredoxin
    • Ingelman, M., Nordlund, P., and Eklund, H. (1995) The structure of a reduced mutant T4 glutaredoxin FEBS Lett. 370, 209-211
    • (1995) FEBS Lett. , vol.370 , pp. 209-211
    • Ingelman, M.1    Nordlund, P.2    Eklund, H.3
  • 13
    • 33845977309 scopus 로고    scopus 로고
    • Crystal Structures of a Poxviral Glutaredoxin in the Oxidized and Reduced States Show Redox-correlated Structural Changes
    • DOI 10.1016/j.jmb.2006.11.002, PII S0022283606015312
    • Bacik, J.-P. and Hazes, B. (2007) Crystal Structures of a Poxviral Glutaredoxin in the Oxidized and Reduced States Show Redox-correlated Structural Changes J. Mol. Biol. 365, 1545-1558 (Pubitemid 46048843)
    • (2007) Journal of Molecular Biology , vol.365 , Issue.5 , pp. 1545-1558
    • Bacik, J.-P.1    Hazes, B.2
  • 15
    • 0035919812 scopus 로고    scopus 로고
    • Solution structure of Escherichia coli glutaredoxin-2 shows similarity to mammalian glutathione-S-transferases
    • DOI 10.1006/jmbi.2001.4721
    • Xia, B., Vlamis-Gardikas, A., Holmgren, A., Wüthrich, K., Wright, P. E., and Dyson, H. J. (2001) Solution Structure of Escherichia coli glutaredoxin-2 Shows Similarity to Mammalian Glutathione-S-transferases J. Mol. Biol. 310, 907-918 (Pubitemid 32695704)
    • (2001) Journal of Molecular Biology , vol.310 , Issue.4 , pp. 907-918
    • Xia, B.1    Vlamis-Gardikas, A.2    Holmgren, A.3    Wright, P.E.4    Dyson, H.J.5
  • 16
    • 21644481715 scopus 로고    scopus 로고
    • Molecular mapping of functionalities in the solution structure of reduced Grx4, a monothiol glutaredoxin from Escherichia coli
    • DOI 10.1074/jbc.M500679200
    • Fladvad, M., Bellanda, M., Fernandes, A. P., Mammi, S., Vlamis-Gardikas, A., Holmgren, A., and Sunnerhagen, M. (2005) Molecular Mapping of Functionalities in the Solution Structure of Reduced Grx4, a Monothiol Glutaredoxin from Escherichia coli J. Biol. Chem. 280, 24553-24561 (Pubitemid 40934542)
    • (2005) Journal of Biological Chemistry , vol.280 , Issue.26 , pp. 24553-24561
    • Fladvad, M.1    Bellanda, M.2    Fernandes, A.P.3    Mammi, S.4    Vlamis-Gardikas, A.5    Holmgren, A.6    Sunnerhagen, M.7
  • 17
    • 1542346115 scopus 로고    scopus 로고
    • Solution structures of reduced and oxidized bacteriophage T4 glutaredoxin
    • DOI 10.1023/B:JNMR.0000019506.30351.ca
    • Wang, Y., Amegbey, G., and Wishart, D. S. (2004) Solution structures of reduced and oxidized bacteriophage T4 glutaredoxin J. Biomol. NMR 29, 85-90 (Pubitemid 38324876)
    • (2004) Journal of Biomolecular NMR , vol.29 , Issue.1 , pp. 85-90
    • Wang, Y.1    Amegbey, G.2    Wishart, D.S.3
  • 18
    • 0032563140 scopus 로고    scopus 로고
    • The NMR solution structure of human glutaredoxin in the fully reduced form
    • DOI 10.1006/jmbi.1998.1913
    • Sun, C., Berardi, M. J., and Bushweller, J. H. (1998) The NMR Solution Structure of Human Glutaredoxin in the Fully Reduced Form J. Mol. Biol. 280, 687-701 (Pubitemid 28336374)
    • (1998) Journal of Molecular Biology , vol.280 , Issue.4 , pp. 687-701
    • Sun, C.1    Berardi, M.J.2    Bushweller, J.H.3
  • 19
    • 0025681549 scopus 로고
    • Protein structure determination in solution by NMR spectroscopy
    • Wuthrich, K. (1990) Protein Structure Determination in Solution by NMR Spectroscopy J. Biol. Chem. 265, 22059-22062 (Pubitemid 120014262)
    • (1990) Journal of Biological Chemistry , vol.265 , Issue.36 , pp. 22059-22062
    • Wuthrich, K.1
  • 20
    • 0031714689 scopus 로고    scopus 로고
    • Structure calculation of biological macromolecules from NMR data
    • DOI 10.1017/S0033583598003436
    • Guntert, P. (1998) Structure calculations of biological macromolecules from NMR data Q. Rev. Biophys. 31, 145-237 (Pubitemid 28448732)
    • (1998) Quarterly Reviews of Biophysics , vol.31 , Issue.2 , pp. 145-237
    • Guntert, P.1
  • 21
    • 55649119346 scopus 로고    scopus 로고
    • Solution NMR structure determination of proteins revisited
    • Billeter, M., Wagner, G., and Wuthrich, K. (2008) Solution NMR structure determination of proteins revisited J. Biomol. NMR 42, 155-158
    • (2008) J. Biomol. NMR , vol.42 , pp. 155-158
    • Billeter, M.1    Wagner, G.2    Wuthrich, K.3
  • 22
    • 1242328666 scopus 로고    scopus 로고
    • The Glutaredoxin -C-P-Y-C- Motif: Influence of Peripheral Residues
    • DOI 10.1016/S0969-2126(04)00021-8
    • Foloppe, N. and Nilsson, L. (2004) The glutaredoxin -C-P-Y-C- motif: Influence of peripheral residues Structure 12, 289-300 (Pubitemid 38224551)
    • (2004) Structure , vol.12 , Issue.2 , pp. 289-300
    • Foloppe, N.1    Nilsson, L.2
  • 23
    • 0029559184 scopus 로고
    • Why is DsbA such an oxidizing disulfide catalyst?
    • DOI 10.1016/0092-8674(95)90210-4
    • Grauschopf, U., Winther, J. R., Korber, P., Zander, T., Dallinger, P., and Bardwell, J. C. A. (1995) Why is DsbA Such an Oxidizing Disulfide Catalyst? Cell 83, 947-955 (Pubitemid 26006536)
    • (1995) Cell , vol.83 , Issue.6 , pp. 947-955
    • Grauschopf, U.1    Winther, J.R.2    Korber, P.3    Zander, T.4    Dallinger, P.5    Bardwell, J.C.A.6
  • 24
    • 0031776171 scopus 로고    scopus 로고
    • A single dipeptide sequence modulates the redox properties of a whole enzyme family
    • DOI 10.1016/S1359-0278(98)00024-8
    • Huber-Wunderlich, M. and Glockshuber, R. (1998) A single dipeptide sequence modulates the redox properties of a whole enzyme family Folding Des. 3, 161-171 (Pubitemid 28264393)
    • (1998) Folding and Design , vol.3 , Issue.3 , pp. 161-171
    • Huber-Wunderlich, M.1    Glockshuber, R.2
  • 25
    • 34548264692 scopus 로고    scopus 로고
    • Stabilization of the Catalytic Thiolate in a Mammalian Glutaredoxin: Structure, Dynamics and Electrostatics of Reduced Pig Glutaredoxin and its Mutants
    • DOI 10.1016/j.jmb.2007.05.101, PII S002228360700681X
    • Foloppe, N. and Nilsson, L. (2007) Stabilization of the Catalytic Thiolate in a Mammalian Glutaredoxin: Structure, Dynamics and Electrostatics of Reduced Pig Glutaredoxin and its Mutants J. Mol. Biol. 372, 798-816 (Pubitemid 47315722)
    • (2007) Journal of Molecular Biology , vol.372 , Issue.3 , pp. 798-816
    • Foloppe, N.1    Nilsson, L.2
  • 26
    • 0029062201 scopus 로고
    • A Molecular Model for the Redox Potential Difference between Thioredoxin and DsbA, Based on Electrostatic Calculations
    • Gane, P. J., Freedman, R. B., and Warwicker, J. (1995) A Molecular Model for the Redox Potential Difference Between Thioredoxin and DsbA, Based on Electrostatic Calculations J. Mol. Biol. 249, 376-387
    • (1995) J. Mol. Biol. , vol.249 , pp. 376-387
    • Gane, P.J.1    Freedman, R.B.2    Warwicker, J.3
  • 27
    • 0039714219 scopus 로고    scopus 로고
    • Characterization of Escherichia coli thioredoxin variants mimicking the active-sites of other thiol/disulfide oxidoreductases
    • Mössner, E., Huber-Wunderlich, M., and Glockshuber, R. (1998) Characterization of Escherichia coli thioredoxin variants mimicking the active-sites of other thiol/disulfide oxidoreductases Protein Sci. 7, 1233-1244 (Pubitemid 28237057)
    • (1998) Protein Science , vol.7 , Issue.5 , pp. 1233-1244
    • Mossner, E.1    Huber-Wunderlich, M.2    Glockshuber, R.3
  • 28
    • 0029057023 scopus 로고
    • Proton Sharing between Cysteine Thiols in Escherichia coli Thioredoxin: Implications for the Mechanism of Protein Disulfide Reduction
    • Jeng, M. F., Holmgren, A., and Dyson, H. J. (1995) Proton Sharing between Cysteine Thiols in Escherichia coli Thioredoxin: Implications for the Mechanism of Protein Disulfide Reduction Biochemistry 34, 10101-10105
    • (1995) Biochemistry , vol.34 , pp. 10101-10105
    • Jeng, M.F.1    Holmgren, A.2    Dyson, H.J.3
  • 29
    • 0030880594 scopus 로고    scopus 로고
    • Structural analysis of three His32 mutants of DsbA: Support for an electrostatic role of His32 in DsbA stability
    • Guddat, L. W., Bardwell, J. C. A., Glockshuber, R., Huber-Wunderlich, M., Zander, T., and Martin, J. L. (1997) Stuctural analysis of three His32 mutants of DsbA: Support for an electrostatic role of His32 in DsbA stability Protein Sci. 6, 1893-1900 (Pubitemid 27391270)
    • (1997) Protein Science , vol.6 , Issue.9 , pp. 1893-1900
    • Guddat, L.W.1    Bardwell, J.C.A.2    Glockshuber, R.3    Huber-Wunderlich, M.4    Zander, T.5    Martin, J.L.6
  • 30
    • 0032959801 scopus 로고    scopus 로고
    • Direct NMR observation of the Cys-14 thiol proton of reduced Escherichia coli glutaredoxin-3 supports the presence of an active site thiol-thiolate hydrogen bond
    • DOI 10.1016/S0014-5793(99)00401-9, PII S0014579399004019
    • Nordstrand, K., Åslund, F., Meunier, S., Holmgren, A., Otting, G., and Berndt, K. D. (1999) Direct NMR observation of the Cys-14 thiol proton of reduced Escherichia coli glutaredoxin-3 supports the presence of an active site thiol-thiolate hydrogen bond FEBS Lett. 449, 196-200 (Pubitemid 29192905)
    • (1999) FEBS Letters , vol.449 , Issue.2-3 , pp. 196-200
    • Nordstrand, K.1    Aslund, F.2    Meunier, S.3    Holmgren, A.4    Otting, G.5    Berndt, K.D.6
  • 31
    • 0032516494 scopus 로고    scopus 로고
    • Calculations of electrostatic interactions and pK(a)s in the active site of Escherichia coli thioredoxin
    • DOI 10.1021/bi980333x
    • as in the Active Site of Escherichia coli Thioredoxin Biochemistry 37, 10298-10306 (Pubitemid 28366387)
    • (1998) Biochemistry , vol.37 , Issue.28 , pp. 10298-10306
    • Dillet, V.1    Dyson, H.J.2    Bashford, D.3
  • 32
    • 4644321084 scopus 로고    scopus 로고
    • a and redox properties in the thioredoxin superfamily
    • DOI 10.1110/ps.04804504
    • a and redox properties in the thioredoxin superfamily Protein Sci. 13, 2744-2752 (Pubitemid 39274642)
    • (2004) Protein Science , vol.13 , Issue.10 , pp. 2744-2752
    • Moutevelis, E.1    Warwicker, J.2
  • 33
    • 31144438952 scopus 로고    scopus 로고
    • 10-helices: A computational DFT study
    • DOI 10.1021/jp0549780
    • a perturbation of Nterminal cysteine in α- and 3(10)-helices: A computational DFT study J. Phys. Chem. B 110, 557-562 (Pubitemid 43133579)
    • (2006) Journal of Physical Chemistry B , vol.110 , Issue.1 , pp. 557-562
    • Roos, G.1    Loverix, S.2    Geerlings, P.3
  • 34
    • 33645676926 scopus 로고    scopus 로고
    • Theoretical Study of the Unusual Protonation Properties of the Active Site Cysteines in Thioredoxin
    • Carvalho, A. T. P., Fernandes, P. A., and Ramos, M. J. (2006) Theoretical Study of the Unusual Protonation Properties of the Active Site Cysteines in Thioredoxin J. Phys. Chem. B 110, 5758-5761
    • (2006) J. Phys. Chem. B , vol.110 , pp. 5758-5761
    • Carvalho, A.T.P.1    Fernandes, P.A.2    Ramos, M.J.3
  • 35
    • 33947380066 scopus 로고    scopus 로고
    • The reducing activity of glutaredoxin 3 toward cytoplasmic substrate proteins is restricted by methionine 43
    • DOI 10.1021/bi6024353
    • Porat, A., Lillig, C. H., Johansson, C., Fernandes, A. P., Nilsson, L., Holmgren, A., and Beckwith, J. (2007) The Reducing Activity of Glutaredoxin 3 Towards Cytoplasmic Substrate Proteins is Restricted by Methionine 43 Biochemistry 46, 3366-3377 (Pubitemid 46449155)
    • (2007) Biochemistry , vol.46 , Issue.11 , pp. 3366-3377
    • Porat, A.1    Lillig, C.H.2    Johansson, C.3    Fernandes, A.P.4    Nilsson, L.5    Holmgren, A.6    Beckwith, J.7
  • 36
    • 49649088871 scopus 로고    scopus 로고
    • Effects of substitutions in the CXXC active-site motif of the extracytoplasmic thioredoxin ResA
    • Lewin, A., Crow, A., Hodson, C. T. C., Hederstedt, L., and Le Brun, N. E. (2008) Effects of substitutions in the CXXC active-site motif of the extracytoplasmic thioredoxin ResA Biochem. J. 414, 81-91
    • (2008) Biochem. J. , vol.414 , pp. 81-91
    • Lewin, A.1    Crow, A.2    Hodson, C.T.C.3    Hederstedt, L.4    Le Brun, N.E.5
  • 38
    • 0034788323 scopus 로고    scopus 로고
    • Free-energy calculations highlight differences in accuracy between X-ray and NMR structures and add value to protein structure prediction
    • DOI 10.1016/S0969-2126(01)00660-8, PII S0969212601006608
    • Lee, M. R. and Kollman, P. A. (2001) Free-Energy Calculations Highlight Differences in Accuracy between X-ray and NMR Structures and Add value to Protein Structure Prediction Structure 9, 905-916 (Pubitemid 32972157)
    • (2001) Structure , vol.9 , Issue.10 , pp. 905-916
    • Lee, M.R.1    Kollman, P.A.2
  • 39
    • 0036219167 scopus 로고    scopus 로고
    • Improving the quality of protein structures derived by NMR spectroscopy
    • DOI 10.1023/A:1014971029663
    • Spronk, C. A. E. M., Linge, J. P., Hilbers, C. W., and Vuistera, G. W. (2002) Improving the quality of protein structures derived by NMR spectroscopy J. Biomol. NMR 22, 281-289 (Pubitemid 34296110)
    • (2002) Journal of Biomolecular NMR , vol.22 , Issue.3 , pp. 281-289
    • Spronk, C.A.E.M.1    Linge, J.P.2    Hilbers, C.W.3    Vuister, G.W.4
  • 42
    • 0036234027 scopus 로고    scopus 로고
    • Comparison of protein solution structures refined by molecular dynamics simulation in vacuum, with a generalized Born model, and with explicit water
    • DOI 10.1023/A:1014929925008
    • Xia, B., Tsui, V., Case, D. A., Dyson, H. J., and Wright, P. E. (2002) Comparison of protein solution structures refined by molecular dynamics simulation in vacuum, with a generalized Born model, and with explicit water J. Biomol. NMR 22, 317-331 (Pubitemid 34449944)
    • (2002) Journal of Biomolecular NMR , vol.22 , Issue.4 , pp. 317-331
    • Xia, B.1    Tsui, V.2    Case, D.A.3    Dyson, H.J.4    Wright, P.E.5
  • 44
    • 0033064496 scopus 로고    scopus 로고
    • Influence of non-bonded parameters on the quality of NMR structures: A new force field for NMR structure calculation
    • DOI 10.1023/A:1008365802830
    • Linge, L. P. and Nilges, M. (1999) Influence of non-bonded parameters on the quality of NMR structures: A new force-field for NMR structure calculation J. Biomol. NMR 13, 51-59 (Pubitemid 29089239)
    • (1999) Journal of Biomolecular NMR , vol.13 , Issue.1 , pp. 51-59
    • Linge, J.P.1    Nilges, M.2
  • 48
    • 84986534166 scopus 로고
    • New Spherical-Cutoff Methods for Long-Ranges Forces in Macromolecular Simulation
    • Steinbach, P. J. and Brooks, B. R. (1994) New Spherical-Cutoff Methods for Long-Ranges Forces in Macromolecular Simulation J. Comput. Chem. 15, 667-683
    • (1994) J. Comput. Chem. , vol.15 , pp. 667-683
    • Steinbach, P.J.1    Brooks, B.R.2
  • 49
    • 0033850287 scopus 로고    scopus 로고
    • On the truncation of long-range electrostatic interactions in DNA
    • Norberg, J. and Nilsson, L. (2000) On the truncation of long-range electrostatic interactions in DNA Biophys. J. 79, 1537-1553
    • (2000) Biophys. J. , vol.79 , pp. 1537-1553
    • Norberg, J.1    Nilsson, L.2
  • 50
    • 0033654654 scopus 로고    scopus 로고
    • Molecular Dynamics Simulation of Nucleic Acids
    • Cheatham, T. E. and Kollman, P. A. (2000) Molecular Dynamics Simulation of Nucleic Acids Annu. Rev. Phys. Chem. 51, 435-471
    • (2000) Annu. Rev. Phys. Chem. , vol.51 , pp. 435-471
    • Cheatham, T.E.1    Kollman, P.A.2
  • 51
    • 12144275299 scopus 로고    scopus 로고
    • Cutoff size need not strongly influence molecular dynamics results for solvated polypeptides
    • DOI 10.1021/bi0486381
    • Beck, D. A. C., Armen, R. S., and Daggett, V. (2005) Cutoff Size Need Not Strongly Influence Molecular Dynamics Results for Solvated Polypeptides Biochemistry 44, 609-616 (Pubitemid 40109517)
    • (2005) Biochemistry , vol.44 , Issue.2 , pp. 609-616
    • Beck, D.A.C.1    Armen, R.S.2    Daggett, V.3
  • 52
    • 84876070208 scopus 로고    scopus 로고
    • http://www.chemcomp.com/.
  • 54
    • 33646940952 scopus 로고
    • Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
    • Ryckaert, J. P., Ciccotti, G., and Berendsen, H. J. C. (1977) Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes J. Comput. Phys. 23, 327-341
    • (1977) J. Comput. Phys. , vol.23 , pp. 327-341
    • Ryckaert, J.P.1    Ciccotti, G.2    Berendsen, H.J.C.3
  • 58
    • 84988087911 scopus 로고
    • Calculating the Electrostatic Potential of Molecules in Solution: Method and Error Assessment
    • Gilson, M. K., Sharp, K. A., and Honig, B. H. (1987) Calculating the Electrostatic Potential of Molecules in Solution: Method and Error Assessment J. Comput. Chem. 9, 327-335
    • (1987) J. Comput. Chem. , vol.9 , pp. 327-335
    • Gilson, M.K.1    Sharp, K.A.2    Honig, B.H.3
  • 59
    • 0027477251 scopus 로고
    • Multiple-site titration and molecular modeling: Two rapid methods for computing energies and forces for ionizable groups in proteins
    • Gilson, M. K. (1993) Multiple-Site Titration and Molecular Modeling: Two Rapid Methods for Computing Energies and Forces for Ionizable Groups in Proteins Proteins 15, 266-282 (Pubitemid 23079293)
    • (1993) Proteins: Structure, Function and Genetics , vol.15 , Issue.3 , pp. 266-282
    • Gilson, M.K.1
  • 61
    • 0014694171 scopus 로고
    • On N-HS hydrogen bonds
    • Donohue, J. (1969) On N-HS hydrogen bonds J. Mol. Biol. 45, 231-235
    • (1969) J. Mol. Biol. , vol.45 , pp. 231-235
    • Donohue, J.1
  • 62
    • 0001282755 scopus 로고
    • NHS Hydrogen bonds in Peptococcus aerogenes ferredoxin, Clostridium pasteurianum rubredoxin, and Chromatium high potential iron protein
    • Adman, E., Watenpaugh, K. D., and Jensen, L. H. (1975) NHS Hydrogen bonds in Peptococcus aerogenes ferredoxin, Clostridium pasteurianum rubredoxin, and Chromatium high potential iron protein Proc. Natl. Acad. Sci. U.S.A. 72, 4854-4858
    • (1975) Proc. Natl. Acad. Sci. U.S.A. , vol.72 , pp. 4854-4858
    • Adman, E.1    Watenpaugh, K.D.2    Jensen, L.H.3
  • 64
    • 0001473631 scopus 로고
    • A Neutron Diffraction Study of l -Cysteine
    • Kerr, K. A. and Ashmore, J. P. (1975) A Neutron Diffraction Study of l -Cysteine Acta Crystallogr. B31, 2022-2026
    • (1975) Acta Crystallogr. , vol.31 , pp. 2022-2026
    • Kerr, K.A.1    Ashmore, J.P.2
  • 66
    • 14844294424 scopus 로고    scopus 로고
    • Protein Production by Auto-Induction in High-Density Shaking Cultures
    • Studier, F. W. (2005) Protein Production by Auto-Induction in High-Density Shaking Cultures Protein Expression Purif. 41, 207-234
    • (2005) Protein Expression Purif. , vol.41 , pp. 207-234
    • Studier, F.W.1
  • 67
    • 0030895581 scopus 로고    scopus 로고
    • Cloning, overexpression, and characterization of glutaredoxin 2, an atypical glutaredoxin from Escherichia coli
    • DOI 10.1074/jbc.272.17.11236
    • Vlamis-Gardikas, A., Åslund, F., Spyrou, G., Bergman, T., and Holmgren, A. (1997) Cloning, Overexpression, and Characterization of Glutaredoxin 2, an Atypical Glutaredoxin from Escherichia coli J. Biol. Chem. 272, 11236-11243 (Pubitemid 27184121)
    • (1997) Journal of Biological Chemistry , vol.272 , Issue.17 , pp. 11236-11243
    • Vlamis-Gardikas, A.1    Aslund, F.2    Spyrou, G.3    Bergman, T.4    Holmgren, A.5
  • 68
    • 0000373477 scopus 로고
    • The Acid Strength of the -SH Group in Cysteine and Related Compounds
    • Benesch, R. E. and Benesch, R. (1955) The Acid Strength of the -SH Group in Cysteine and Related Compounds J. Am. Chem. Soc. 77, 5877-5881
    • (1955) J. Am. Chem. Soc. , vol.77 , pp. 5877-5881
    • Benesch, R.E.1    Benesch, R.2
  • 69
    • 0015962432 scopus 로고
    • Spectrophotometric determination of mercaptide ion, an activated form of SH-group in thiol enzymes
    • Polgar, L. (1974) Spectrophotometric determination of mercaptide ion, an activated form of SH-group in thiol enzymes FEBS Lett. 38, 187-190
    • (1974) FEBS Lett. , vol.38 , pp. 187-190
    • Polgar, L.1
  • 70
  • 71
    • 0001754796 scopus 로고
    • Structure and conformation of orthorhombic l -cysteine
    • Kerr, K. A. and Ashmore, J. P. (1973) Structure and conformation of orthorhombic l -cysteine Acta Crystallogr. B29, 2124-2127
    • (1973) Acta Crystallogr. , vol.29 , pp. 2124-2127
    • Kerr, K.A.1    Ashmore, J.P.2
  • 72
    • 1342343126 scopus 로고    scopus 로고
    • A structure-based strategy to identify new molecular scaffolds targeting the bacterial ribosomal A-site
    • DOI 10.1016/j.bmc.2003.12.023
    • Foloppe, N., Chen, I., Davis, B., Hold, A., Morley, D., and Howes, R. (2004) A structure-based strategy to identify new molecular scaffolds targeting the bacterial ribosomal A-site Bioorg. Med. Chem. 12, 935-947 (Pubitemid 38251286)
    • (2004) Bioorganic and Medicinal Chemistry , vol.12 , Issue.5 , pp. 935-947
    • Foloppe, N.1    Chen, I.-J.2    Davis, B.3    Hold, A.4    Morley, D.5    Howes, R.6
  • 75
    • 72949121230 scopus 로고    scopus 로고
    • A residue outside the active site CXXC motif regulates the catalytic efficiency of glutaredoxin 3
    • Shekhter, T., Metanis, N., Dawson, P. E., and Keinan, E. (2010) A residue outside the active site CXXC motif regulates the catalytic efficiency of glutaredoxin 3 Mol. BioSyst. 6, 241-248
    • (2010) Mol. BioSyst. , vol.6 , pp. 241-248
    • Shekhter, T.1    Metanis, N.2    Dawson, P.E.3    Keinan, E.4
  • 76
    • 0033543666 scopus 로고    scopus 로고
    • Binding specificity and mechanistic insight into glutaredoxin-catalyzed protein disulfide reduction
    • DOI 10.1006/jmbi.1999.3067
    • Berardi, M. J. and Bushweller, J. H. (1999) Binding Specificity and Mechanistic Insight into Glutaredoxin-catalysed Protein Disulfide Reduction J. Mol. Biol. 292, 151-161 (Pubitemid 29425660)
    • (1999) Journal of Molecular Biology , vol.292 , Issue.1 , pp. 151-161
    • Berardi, M.J.1    Bushweller, J.H.2
  • 77
    • 34249668288 scopus 로고    scopus 로고
    • Conformational fluctuations coupled to the thiol-disulfide transfer between thioredoxin and arsenate reductase in Bacillus subtilis
    • DOI 10.1074/jbc.M700970200
    • Li, Y., Hu, Y., Zhang, X., Xu, H., Lescop, E., Xia, B., and Jin, C. (2007) Conformational Fluctuations Coupled to the Thiol-Disulfide Transfer between Thioredoxin and Arsenate Reductase in Bacillus subtilis J. Biol. Chem. 282, 11078-11083 (Pubitemid 47100754)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.15 , pp. 11078-11083
    • Li, Y.1    Hu, Y.2    Zhang, X.3    Xu, H.4    Lescop, E.5    Xia, B.6    Jin, C.7
  • 78
    • 0037821878 scopus 로고    scopus 로고
    • Real-time kinetics of the interaction between the two subunits, Escherichia coli thioredoxin and gene 5 protein of phage T7 DNA polymerase
    • DOI 10.1074/jbc.M302310200
    • Singha, N. C., Vlamis-Gardikas, A., and Holmgren, A. (2003) Real-time Kinetics of the Interaction between the Two Subunits, Escherichia coli Thioredoxin and Gene 5 Protein of Phage T7 DNA Polymerase J. Biol. Chem. 278, 21421-21428 (Pubitemid 36792538)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.24 , pp. 21421-21428
    • Singha, N.C.1    Vlamis-Gardikas, A.2    Holmgren, A.3
  • 79
    • 0030018518 scopus 로고    scopus 로고
    • On the reactivity and ionization of the active site cysteine residues of Escherichia coli thioredoxin
    • DOI 10.1021/bi960465v
    • Takahashi, N. and Creighton, T. E. (1996) On the Reactivity and Ionization of the Active Site Cysteine Residues of Escherichia coli Thioredoxin Biochemistry 35, 8342-8353 (Pubitemid 26234939)
    • (1996) Biochemistry , vol.35 , Issue.25 , pp. 8342-8353
    • Takahashi, N.1    Creighton, T.E.2
  • 80
    • 0025909444 scopus 로고
    • High-resolution three-dimentional structure of reduced recombinant human thioredoxin in solution
    • Forman-Kay, J. D., Clore, G. M., Wingfield, P. T., and Gronenborn, A. M. (1991) High-resolution three-dimentional structure of reduced recombinant human thioredoxin in solution Biochemistry 30, 2685-2698
    • (1991) Biochemistry , vol.30 , pp. 2685-2698
    • Forman-Kay, J.D.1    Clore, G.M.2    Wingfield, P.T.3    Gronenborn, A.M.4


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