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Volumn 50, Issue 11, 2012, Pages 3418-3421

Microbiological applications of high-resolution melting analysis

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; CYSTEINE; DNA; FLUORESCENT DYE; GUANINE; INTERFERON; INTERLEUKIN 28B; ISONIAZID; OSELTAMIVIR; QUINOLINE DERIVED ANTIINFECTIVE AGENT; RIFAMPICIN; SIALIDASE; THYMINE;

EID: 84867493781     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.01709-12     Document Type: Short Survey
Times cited : (133)

References (27)
  • 1
    • 84858054024 scopus 로고    scopus 로고
    • Minim typing - A rapid and low cost MLST based typing tool for Klebsiella pneumoniae
    • doi:10.1371/journal.pone.0033530
    • Andersson P, Tong SY, Bell JM, Turnidge JD, Giffard PM. 2012. Minim typing - a rapid and low cost MLST based typing tool for Klebsiella pneumoniae. PLoS One 7:e33530. doi:10.1371/journal.pone.0033530.
    • (2012) PLoS One , vol.7
    • Andersson, P.1    Tong, S.Y.2    Bell, J.M.3    Turnidge, J.D.4    Giffard, P.M.5
  • 2
    • 80053483572 scopus 로고    scopus 로고
    • Rapid detection of isoniazid, rifampin, and ofloxacin resistance in Mycobacterium tuberculosis clinical isolates using high-resolution melting analysis
    • Chen X, et al. 2011. Rapid detection of isoniazid, rifampin, and ofloxacin resistance in Mycobacterium tuberculosis clinical isolates using high-resolution melting analysis. J. Clin. Microbiol. 49:3450-3457.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 3450-3457
    • Chen, X.1
  • 3
    • 80355146254 scopus 로고    scopus 로고
    • Use of a high resolution melting (HRM) assay to compare gag, pol, and env diversity in adults with different stages of HIV infection
    • doi:10.1371/journal.pone.0027211
    • Cousins MM, et al. 2011. Use of a high resolution melting (HRM) assay to compare gag, pol, and env diversity in adults with different stages of HIV infection. PLoS One 6:e27211. doi:10.1371/journal.pone.0027211.
    • (2011) PLoS One , vol.6
    • Cousins, M.M.1
  • 4
    • 84861157365 scopus 로고    scopus 로고
    • Rapid, field-deployable method for genotyping and discovery of single-nucleotide polymorphisms associated with drug resistance in Plasmodium falciparum
    • Daniels R, et al. 2012. Rapid, field-deployable method for genotyping and discovery of single-nucleotide polymorphisms associated with drug resistance in Plasmodium falciparum. Antimicrob. Agents Chemother. 56:2976-2986.
    • (2012) Antimicrob. Agents Chemother. , vol.56 , pp. 2976-2986
    • Daniels, R.1
  • 5
    • 79953313021 scopus 로고    scopus 로고
    • UMELT: Prediction of high-resolution melting curves and dynamic melting profiles of PCR products in a rich web application
    • Dwight Z, Palais R, Wittwer CT. 2011. uMELT: prediction of high-resolution melting curves and dynamic melting profiles of PCR products in a rich web application. Bioinformatics 27:1019-1020.
    • (2011) Bioinformatics , vol.27 , pp. 1019-1020
    • Dwight, Z.1    Palais, R.2    Wittwer, C.T.3
  • 6
    • 46949105560 scopus 로고    scopus 로고
    • High resolution melting applications for clinical laboratory medicine
    • Erali M, Voelkerding KV, Wittwer CT. 2008. High resolution melting applications for clinical laboratory medicine. Exp. Mol. Pathol. 85:50-58.
    • (2008) Exp. Mol. Pathol. , vol.85 , pp. 50-58
    • Erali, M.1    Voelkerding, K.V.2    Wittwer, C.T.3
  • 7
    • 80053512749 scopus 로고    scopus 로고
    • High-resolution melting analysis for identification of the Cryptococcus neoformans-Cryptococcus gattii complex
    • Gago S, et al. 2011. High-resolution melting analysis for identification of the Cryptococcus neoformans-Cryptococcus gattii complex. J. Clin. Microbiol. 49:3663-3666.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 3663-3666
    • Gago, S.1
  • 8
    • 0037371570 scopus 로고    scopus 로고
    • Amplicon melting analysis with labeled primers: A closed-tube method for differentiating homozygotes and heterozygotes
    • DOI 10.1373/49.3.396
    • Gundry CN, et al. 2003. Amplicon melting analysis with labeled primers: a closed-tube method for differentiating homozygotes and heterozygotes. Clin. Chem. 49:396-406. (Pubitemid 36250200)
    • (2003) Clinical Chemistry , vol.49 , Issue.3 , pp. 396-406
    • Gundry, C.N.1    Vandersteen, J.G.2    Reed, G.H.3    Pryor, R.J.4    Chen, J.5    Wittwer, C.T.6
  • 9
    • 77956811486 scopus 로고    scopus 로고
    • Rapid detection and identification of mucormycetes from culture and tissue samples by use of high-resolution melt analysis
    • Hrncirova K, et al. 2010. Rapid detection and identification of mucormycetes from culture and tissue samples by use of high-resolution melt analysis. J. Clin. Microbiol. 48:3392-3394.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 3392-3394
    • Hrncirova, K.1
  • 10
    • 79957982612 scopus 로고    scopus 로고
    • Real-time polymerase chain reaction assay based on high-resolution melting analysis for the determination of the rs12979860 polymorphism involved in hepatitis C treatment response
    • Kovanda A, Poljak M. 2011. Real-time polymerase chain reaction assay based on high-resolution melting analysis for the determination of the rs12979860 polymorphism involved in hepatitis C treatment response. J. Virol. Methods 175:125-128.
    • (2011) J. Virol. Methods , vol.175 , pp. 125-128
    • Kovanda, A.1    Poljak, M.2
  • 11
    • 79959464855 scopus 로고    scopus 로고
    • The utility of high-resoultion melting analysis of SNP nucleated PCR amplicons - A MLST based Staphylococcus aureus typing scheme
    • doi:10.1371/journal.pone.0019749.g004
    • Lilliebridge RA, Tong SYC, Giffard PM, Holt DC. 2011. The utility of high-resoultion melting analysis of SNP nucleated PCR amplicons - a MLST based Staphylococcus aureus typing scheme. PLoS One 6:e19749. doi:10.1371/journal. pone.0019749.g004.
    • (2011) PLoS One , vol.6
    • Lilliebridge, R.A.1    Tong, S.Y.C.2    Giffard, P.M.3    Holt, D.C.4
  • 12
    • 75249105299 scopus 로고    scopus 로고
    • Campylobacter jejuni and Campylobacter coli genotyping by high-resolution melting analysis of a flaA fragment
    • Merchant-Patel S, et al. 2010. Campylobacter jejuni and Campylobacter coli genotyping by high-resolution melting analysis of a flaA fragment. Appl. Environ. Microbiol. 76:493-499.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 493-499
    • Merchant-Patel, S.1
  • 13
    • 11244267245 scopus 로고    scopus 로고
    • Rapid species identification within the Mycobacterium chelonae-abscessus group by high-resolution melting analysis of hsp65 PCR products
    • DOI 10.1309/WDR0-82X9-FFJB-QQGB
    • Odell ID, Cloud JL, Seipp M, Wittwer CT. 2005. Rapid species identification within the Mycobacterium chelonae-abscessus group by high-resolution melting analysis of hsp65 PCR products. Am. J. Clin. Pathol. 123:96-101. (Pubitemid 40066175)
    • (2005) American Journal of Clinical Pathology , vol.123 , Issue.1 , pp. 96-101
    • Odell, I.D.1    Cloud, J.L.2    Seipp, M.3    Wittwer, C.T.4
  • 14
    • 84857347714 scopus 로고    scopus 로고
    • Combined molecular gram typing and high-resolution melting analysis for rapid identification of a syndromic panel of bacteria responsible for sepsis-associated bloodstream infection
    • Ozbak H, Dark P, Maddi S, Chadwick P, Warhurst G. 2012. Combined molecular gram typing and high-resolution melting analysis for rapid identification of a syndromic panel of bacteria responsible for sepsis-associated bloodstream infection. J. Mol. Diagn. 14:176-184.
    • (2012) J. Mol. Diagn. , vol.14 , pp. 176-184
    • Ozbak, H.1    Dark, P.2    Maddi, S.3    Chadwick, P.4    Warhurst, G.5
  • 15
    • 34249726643 scopus 로고    scopus 로고
    • High-resolution DNA melt curve analysis of the clustered, regularly interspaced short-palindromic-repeat locus of Campylobacter jejuni
    • DOI 10.1128/AEM.02702-06
    • Price EP, Smith H, Huygens F, Giffard PM. 2007. High-resolution DNA melt curve analysis of the clustered, regularly interspaced short-palindromic-repeat locus of Campylobacter jejuni. Appl. Environ. Microbiol. 73:3431-3436. (Pubitemid 46834996)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.10 , pp. 3431-3436
    • Price, E.P.1    Smith, H.2    Huygens, F.3    Giffard, P.M.4
  • 16
    • 79959480004 scopus 로고    scopus 로고
    • Preliminary validation of a novel high resolution melt-based typing method based on the multilocus sequence typing scheme of Streptococcus pyogenes
    • Richardson LJ, et al. 2011. Preliminary validation of a novel high resolution melt-based typing method based on the multilocus sequence typing scheme of Streptococcus pyogenes. Clin. Microbiol. Infect. 17:1426-1434.
    • (2011) Clin. Microbiol. Infect. , vol.17 , pp. 1426-1434
    • Richardson, L.J.1
  • 17
    • 78650252710 scopus 로고    scopus 로고
    • Differentiation of Staphylococcus spp. by high-resolution melting analysis
    • Slany M, et al. 2010. Differentiation of Staphylococcus spp. by high-resolution melting analysis. Can. J. Microbiol. 56:1040-1049.
    • (2010) Can. J. Microbiol. , vol.56 , pp. 1040-1049
    • Slany, M.1
  • 18
    • 60849103771 scopus 로고    scopus 로고
    • Classification of fowl adenovirus serotypes by use of high-resolution melting-curve analysis of the hexon gene region
    • Steer PA, Kirkpatrick NC, O'Rourke D, Noormohammadi AH. 2009. Classification of fowl adenovirus serotypes by use of high-resolution melting-curve analysis of the hexon gene region. J. Clin. Microbiol. 47:311-321.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 311-321
    • Steer, P.A.1    Kirkpatrick, N.C.2    O'Rourke, D.3    Noormohammadi, A.H.4
  • 19
    • 39749106626 scopus 로고    scopus 로고
    • High-resolution melting analysis of the spa repeat region of Staphylococcus aureus
    • DOI 10.1373/clinchem.2007.093658
    • Stephens AJ, Inman-Bamber J, Giffard PM, Huygens F. 2008. High-resolution melting analysis of the spa repeat region of Staphylococcus aureus. Clin. Chem. 54:432-436. (Pubitemid 351302640)
    • (2008) Clinical Chemistry , vol.54 , Issue.2 , pp. 432-436
    • Stephens, A.J.1    Inman-Bamber, J.2    Giffard, P.M.3    Huygens, F.4
  • 20
    • 49749137825 scopus 로고    scopus 로고
    • Differentiation between vaccine and wild-type varicella-zoster virus genotypes by high-resolution melt analysis of single nucleotide polymorphisms
    • Toi CS, Dwyer DE. 2008. Differentiation between vaccine and wild-type varicella-zoster virus genotypes by high-resolution melt analysis of single nucleotide polymorphisms. J. Clin. Virol. 43:18-24.
    • (2008) J. Clin. Virol. , vol.43 , pp. 18-24
    • Toi, C.S.1    Dwyer, D.E.2
  • 21
    • 79959614025 scopus 로고    scopus 로고
    • Rapid detection of the H275Y oseltamivir resistance mutation in influenza A/H1N1 2009 by single base pair RT-PCR and high-resolution melting
    • doi:10.1371/journal.pone.0021446
    • Tong SY, et al. 2011. Rapid detection of the H275Y oseltamivir resistance mutation in influenza A/H1N1 2009 by single base pair RT-PCR and high-resolution melting. PLoS One 6:e21446. doi:10.1371/journal.pone.0021446.
    • (2011) PLoS One , vol.6
    • Tong, S.Y.1
  • 22
    • 70649108562 scopus 로고    scopus 로고
    • High-resolution melting analysis of the spa locus reveals significant diversity within sequence type 93 methicillin-resistant Staphylococcus aureus from northern Australia
    • Tong SY, et al. 2009. High-resolution melting analysis of the spa locus reveals significant diversity within sequence type 93 methicillin-resistant Staphylococcus aureus from northern Australia. Clin. Microbiol. Infect. 15:1126-1131.
    • (2009) Clin. Microbiol. Infect. , vol.15 , pp. 1126-1131
    • Tong, S.Y.1
  • 23
    • 83455182089 scopus 로고    scopus 로고
    • High-resolution melting genotyping of Enterococcus faecium based on multilocus sequence typing derived single nucleotide polymorphisms
    • doi:10.1371/journal.pone.0029189
    • Tong SY, et al. 2011. High-resolution melting genotyping of Enterococcus faecium based on multilocus sequence typing derived single nucleotide polymorphisms. PLoS One 6:e29189. doi:10.1371/journal.pone.0029189.
    • (2011) PLoS One , vol.6
    • Tong, S.Y.1
  • 24
    • 77955620962 scopus 로고    scopus 로고
    • Analysis of HIV diversity using a high-resolution melting assay
    • Towler WI, et al. 2010. Analysis of HIV diversity using a high-resolution melting assay. AIDS Res. Hum. Retroviruses 26:913-918.
    • (2010) AIDS Res. Hum. Retroviruses , vol.26 , pp. 913-918
    • Towler, W.I.1
  • 25
    • 84861108425 scopus 로고    scopus 로고
    • Improved detection of genetic markers of antimicrobial resistance by hybridization probe-based melting curve analysis using primers to mask proximal mutations: Examples include the influenza H275Y substitution
    • Whiley DM, et al. 2012. Improved detection of genetic markers of antimicrobial resistance by hybridization probe-based melting curve analysis using primers to mask proximal mutations: examples include the influenza H275Y substitution. J. Antimicrob. Chemother. 67:1375-1379.
    • (2012) J. Antimicrob. Chemother. , vol.67 , pp. 1375-1379
    • Whiley, D.M.1
  • 26
    • 0038359432 scopus 로고    scopus 로고
    • High-resolution genotyping by amplicon melting analysis using LCGreen
    • DOI 10.1373/49.6.853
    • Wittwer CT, Reed GH, Gundry CN, Vandersteen JG, Pryor RJ. 2003. High-resolution genotyping by amplicon melting analysis using LCGreen. Clin. Chem. 49:853-860. (Pubitemid 36623462)
    • (2003) Clinical Chemistry , vol.49 , Issue.6 , pp. 853-860
    • Wittwer, C.T.1    Reed, G.H.2    Gundry, C.N.3    Vandersteen, J.G.4    Pryor, R.J.5
  • 27
    • 67650087609 scopus 로고    scopus 로고
    • Rapid identification of biothreat and other clinically relevant bacterial species by use of universal PCR coupled with high-resolution melting analysis
    • Yang S, et al. 2009. Rapid identification of biothreat and other clinically relevant bacterial species by use of universal PCR coupled with high-resolution melting analysis. J. Clin. Microbiol. 47:2252-2255.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 2252-2255
    • Yang, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.